Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0074500 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.5e-266 921.0 453 100.0
Rhsim01G0161400 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.7e-256 887.1 452 97.1
RhsimUnG0189300 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.7e-256 887.1 452 97.1
RhsimUnG0190700 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.7e-256 887.1 452 97.1
Rhsim13G0002100 Rhododendron simsii HOM05D008406 ORTHO05D010960 8.2e-255 883.2 452 96.7
Rhsim11G0039100 Rhododendron simsii HOM05D008406 ORTHO05D010960 9.1e-254 879.8 452 96.5
Rhsim05G0054300 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.8e-223 778.5 439 88.8
Rhsim13G0128400 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.2e-193 677.9 401 84.3
Rhsim04G0192000 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.7e-186 654.8 404 79.5
Rhsim09G0075400 Rhododendron simsii HOM05D008406 ORTHO05D010960 6.8e-185 651.0 452 76.8
Rhsim02G0192500 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.4e-182 643.3 402 78.4
RhsimUnG0165400 Rhododendron simsii HOM05D008406 ORTHO05D010960 8.7e-172 607.4 452 69.5
Rhsim06G0114000 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.1e-166 590.5 449 67.7
Rhsim01G0093200 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.9e-166 589.7 408 72.3
Rhsim04G0042900 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.0e-151 540.8 452 64.8
Rhsim04G0140000 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.1e-145 518.8 404 66.6
Rhsim04G0229500 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.7e-138 495.7 452 60.8
Rhsim03G0059200 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.1e-126 457.6 332 70.2
Rhsim04G0129500 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.1e-126 457.6 381 62.7
Rhsim02G0063100 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.2e-112 411.0 452 53.3
Rhsim10G0118900 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.3e-94 349.4 430 47.4
Rhsim11G0017200 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.1e-86 324.7 429 45.7
RhsimUnG0052300 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.8e-85 320.1 192 81.2
RhsimUnG0052400 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.9e-81 307.4 202 74.8
Rhsim07G0158000 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.5e-80 303.1 289 58.5
Rhsim07G0162000 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.9e-79 299.7 453 45.5
Rhsim04G0047800 Rhododendron simsii HOM05D008406 ORTHO05D010960 6.2e-77 292.4 426 43.2
RhsimUnG0083200 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.2e-72 278.1 383 45.4
Rhsim03G0108900 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.4e-67 260.0 146 82.9
Rhsim10G0121500 Rhododendron simsii HOM05D008406 ORTHO05D010960 9.9e-67 258.5 375 41.9
Rhsim05G0097200 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.3e-63 248.1 235 58.7
Rhsim12G0097900 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.1e-62 245.0 195 63.6
Rhsim05G0105000 Rhododendron simsii HOM05D008406 ORTHO05D010960 9.6e-62 241.9 274 49.6
Rhsim02G0086800 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.8e-58 229.9 296 46.3
Rhsim01G0168800 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.1e-54 218.4 261 46.7
Rhsim05G0118300 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.8e-39 167.9 291 37.5
Rhsim10G0077600 Rhododendron simsii HOM05D008406 ORTHO05D010960 8.7e-31 139.0 151 53.6
vmacro04996 Vaccinium macrocarpon HOM05D010755 ORTHO05D012899 3.8e-26 123.6 313 30.7
Rhsim10G0077700 Rhododendron simsii HOM05D008406 ORTHO05D010960 7.9e-24 115.9 133 48.9
vmacro21218 Vaccinium macrocarpon HOM05D015585 ORTHO05D010960 3.9e-23 113.6 180 36.1
Rhsim03G0109000 Rhododendron simsii HOM05D008406 ORTHO05D010960 9.1e-20 102.4 73 69.9
Rhsim06G0145900 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.0e-18 96.7 56 75.0
CSS0007962 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 5.5e-17 93.2 175 30.9
CSS0038459 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 7.2e-17 92.8 176 31.8
CSS0017860 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 9.4e-17 92.4 175 30.9
CSS0036728 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 9.4e-17 92.4 175 30.9
CSS0006123 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.2e-16 92.0 175 30.9
CSS0008891 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.6e-16 90.5 175 30.3
CSS0030445 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.6e-16 90.5 175 30.3
CSS0014396 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.7e-16 90.1 176 31.2
CSS0001933 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 6.1e-16 89.7 175 30.3
CSS0049581 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.8e-15 88.2 311 28.0
CSS0038610 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.3e-15 87.8 262 28.6
CSS0001140 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.0e-15 87.4 204 32.4
CSS0027151 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.0e-15 87.4 311 28.6
CSS0031881 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.0e-15 87.4 201 32.3
CSS0038054 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.0e-15 87.4 270 27.8
CSS0024929 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.9e-15 87.0 311 28.6
Rhsim10G0097000 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.9e-15 87.0 51 70.6
CSS0017177 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 8.8e-15 85.9 169 34.3
CSS0046219 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.0e-14 84.7 273 28.9
CSS0015526 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.6e-14 84.3 309 28.2
CSS0036793 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.6e-14 84.3 201 31.8
CSS0003114 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 4.4e-14 83.6 310 27.7
CSS0011259 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 9.7e-14 82.4 145 35.2
CSS0002865 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.8e-13 80.9 204 31.4
CSS0009479 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.7e-13 80.5 179 28.5
CSS0036149 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.7e-13 80.5 167 32.9
CSS0040911 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.8e-13 80.1 145 33.8
CSS0025081 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 6.3e-13 79.7 180 30.6
CSS0043317 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 8.2e-13 79.3 189 30.2
CSS0050133 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 8.2e-13 79.3 183 31.1
CSS0006027 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.1e-12 79.0 189 29.6
CSS0007901 Camellia sinensis var. sinensis HOM05D012151 ORTHO05D006018 1.1e-12 79.0 125 35.2
CSS0011457 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.1e-12 79.0 150 31.3
CSS0027497 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.1e-12 79.0 189 29.6
CSS0039431 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.4e-12 78.6 189 29.1
CSS0042085 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.4e-12 78.6 310 26.5
CSS0010639 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 2.4e-12 77.8 173 33.5
CSS0022835 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.4e-12 77.8 189 29.1
CSS0012980 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.1e-12 77.4 150 32.0
CSS0023305 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.1e-12 77.4 121 36.4
CSS0007585 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.1e-12 77.0 150 32.0
CSS0042845 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 5.3e-12 76.6 161 31.1
CSS0012972 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 7.0e-12 76.3 150 31.3
CSS0032514 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 7.0e-12 76.3 190 28.4
CSS0048857 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 7.0e-12 76.3 180 29.4
CSS0005466 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 9.1e-12 75.9 189 29.1
CSS0045818 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 9.1e-12 75.9 180 32.2
CSS0013886 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.5e-11 75.1 150 33.3
CSS0049321 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.5e-11 75.1 180 29.4
CSS0008845 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.6e-11 74.3 150 31.3
CSS0043200 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.6e-11 74.3 302 28.5
CSS0035726 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.5e-11 73.9 177 31.6
CSS0045286 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 3.5e-11 73.9 176 30.7
CSS0011911 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 5.9e-11 73.2 179 31.3
CSS0008810 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 7.7e-11 72.8 180 28.9
CSS0025994 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.0e-10 72.4 130 34.6
CSS0033407 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.3e-10 72.0 144 31.2
CSS0003102 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.7e-10 71.6 145 33.8
CSS0004868 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 1.7e-10 71.6 158 33.5
CSS0043674 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.7e-10 71.6 179 31.3
CSS0047662 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 1.7e-10 71.6 157 33.1
CSS0015065 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.2e-10 71.2 191 30.9
CSS0015189 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.2e-10 71.2 243 25.9
CSS0044192 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.2e-10 71.2 120 35.0
CSS0019131 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.9e-10 70.9 142 32.4
CSS0034030 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 2.9e-10 70.9 175 30.9
CSS0017470 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.8e-10 70.5 121 34.7
CSS0028174 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.8e-10 70.5 180 27.8
CSS0008313 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 6.5e-10 69.7 121 34.7
CSS0025361 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.1e-09 68.9 180 32.8
Rhsim05G0118400 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.1e-09 68.9 79 51.9
CSS0015287 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.5e-09 68.6 285 27.4
CSS0022859 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.5e-09 68.6 148 32.4
CSS0035411 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.5e-09 68.6 152 32.2
CSS0042004 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.5e-09 67.8 176 29.5
QL01p024136 Quercus lobata HOM05D009834 ORTHO05D012892 2.5e-09 67.8 153 32.7
Rhsim13G0128300 Rhododendron simsii HOM05D008406 ORTHO05D339808 2.5e-09 67.8 49 75.5
CSS0047382 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.2e-09 67.4 121 33.1
CSS0005159 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.2e-09 67.0 137 33.6
CSS0047062 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.2e-09 67.0 124 33.1
CSS0034272 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 5.5e-09 66.6 167 30.5
CSS0018688 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 7.2e-09 66.2 119 33.6
CSS0032148 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 7.2e-09 66.2 130 33.8
CSS0049519 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 7.2e-09 66.2 102 34.3
CSS0031550 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.2e-08 65.5 107 33.6
CSS0043970 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.2e-08 65.5 205 28.8
CSS0014310 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 1.6e-08 65.1 157 32.5
QL01p001433 Quercus lobata HOM05D009834 ORTHO05D012892 2.1e-08 64.7 150 30.7
QL04p095280 Quercus lobata HOM05D009834 ORTHO05D012892 2.7e-08 64.3 150 30.7
QL12p022170 Quercus lobata HOM05D009834 ORTHO05D012892 3.6e-08 63.9 150 30.7
Rhsim02G0046200 Rhododendron simsii HOM05D003552 ORTHO05D006018 3.6e-08 63.9 124 32.3
CSS0037180 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 4.7e-08 63.5 150 32.0
CSS0037611 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 4.7e-08 63.5 128 34.4
CSS0022067 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 6.1e-08 63.2 167 29.9
CSS0037818 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 6.1e-08 63.2 150 31.3
CSS0041208 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.0e-07 62.4 104 32.7
CSS0046722 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.4e-07 62.0 119 33.6
CSS0049765 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.8e-07 61.6 107 32.7
QL93p0348_0001 Quercus lobata HOM05D009834 ORTHO05D012892 1.8e-07 61.6 107 38.3
vmacro12924 Vaccinium macrocarpon HOM05D000826 ORTHO05D001831 1.8e-07 61.6 143 35.7
CSS0027236 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 2.3e-07 61.2 150 28.7
CSS0013634 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.0e-07 60.8 119 33.6
CSS0029299 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 3.0e-07 60.8 129 32.6
CSS0011533 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.9e-07 60.5 119 34.5
CSS0047058 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 3.9e-07 60.5 119 31.9
CSS0003457 Camellia sinensis var. sinensis HOM05D000148 ORTHO05D000081 5.2e-07 60.1 96 34.4
CSS0003852 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.1e-06 58.9 91 34.1
CSS0008736 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.1e-06 58.9 103 34.0
CSS0033548 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.1e-06 58.9 167 28.7
CSS0045382 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 1.1e-06 58.9 119 33.6
CSS0017663 Camellia sinensis var. sinensis HOM05D011501 ORTHO05D006018 1.5e-06 58.5 100 38.0
CSS0017755 Camellia sinensis var. sinensis HOM05D012151 ORTHO05D006018 1.5e-06 58.5 136 27.9
CSS0043284 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.5e-06 58.5 110 32.7
CSS0048903 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 1.5e-06 58.5 128 32.0
Rhsim06G0088600 Rhododendron simsii HOM05D003552 ORTHO05D006018 1.5e-06 58.5 110 32.7
Rhsim03G0059300 Rhododendron simsii HOM05D008406 ORTHO05D339582 2.6e-06 57.8 47 70.2
CSS0001155 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.4e-06 57.0 119 31.1
CSS0025998 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 4.4e-06 57.0 119 31.9
Atru.chr6.385 Acer truncatum HOM05D000706 ORTHO05D000116 5.7e-06 56.6 168 26.2
Atru.chr6.434_Atru.chr6.435 Acer truncatum HOM05D000706 ORTHO05D001554 5.7e-06 56.6 168 26.2
CSS0023354 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 5.7e-06 56.6 110 33.6
Rhsim02G0153600 Rhododendron simsii HOM05D003552 ORTHO05D006018 5.7e-06 56.6 108 32.4
CSS0012193 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 7.4e-06 56.2 111 32.4
CSS0044977 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 7.4e-06 56.2 110 30.9


User provided reference genes

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