Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0065600 Rhododendron simsii HOM05D004812 ORTHO05D005721 1.8e-128 462.6 238 100.0
Actinidia19286 Actinidia chinensis HOM05D004812 ORTHO05D005721 2.2e-73 279.6 223 68.2
CiPaw.07G171000 Carya illinoinensis HOM05D004812 ORTHO05D005721 1.2e-71 273.9 229 62.9
Haze_22372 Corylus avellana HOM05D004812 ORTHO05D005721 2.9e-70 269.2 232 61.6
Dinv44924 Davidia involucrata HOM05D004812 ORTHO05D005721 3.8e-70 268.9 234 62.0
Prupe.1G418000 Prunus persica HOM05D004812 ORTHO05D005721 3.8e-70 268.9 235 61.7
Atru.chr13.882 Acer truncatum HOM05D004812 ORTHO05D005721 2.5e-69 266.2 233 60.9
CSS0032884 Camellia sinensis var. sinensis HOM05D004812 ORTHO05D005721 4.2e-69 265.4 202 69.8
Cfa013725 Carpinus fangiana HOM05D004812 ORTHO05D005721 9.5e-69 264.2 232 60.8
VMungo1309G0464 Vigna mungo HOM05D004812 ORTHO05D005721 1.4e-67 260.4 217 60.4
Ciclev10002309m.g Citrus clementina HOM05D004812 ORTHO05D005721 1.8e-67 260.0 233 62.7
QL09p016104 Quercus lobata HOM05D004812 ORTHO05D005721 2.3e-67 259.6 236 58.9
TAR381G1267 Trochodendron aralioides HOM05D004812 ORTHO05D005721 2.3e-67 259.6 202 66.8
CiPaw.08G053200 Carya illinoinensis HOM05D004812 ORTHO05D005721 2.6e-66 256.1 232 59.1
Hma1.2p1_1230F.1_g268750 Hydrangea macrophylla HOM05D004812 ORTHO05D005721 4.4e-66 255.4 235 59.6
Nn6g34543 Nelumbo nucifera HOM05D004812 ORTHO05D005721 3.7e-65 252.3 201 65.2
Ca_15883_v3 Cicer arietinum L. HOM05D004812 ORTHO05D005721 8.3e-65 251.1 220 60.9
Glyma.04G048400 Glycine max HOM05D004812 ORTHO05D005721 1.4e-64 250.4 221 58.8
Actinidia29636 Actinidia chinensis HOM05D004812 ORTHO05D005721 2.4e-64 249.6 205 66.3
Lj1g0006267 Lotus japonicus HOM05D004812 ORTHO05D005721 3.1e-64 249.2 203 63.1
vmacro21405 Vaccinium macrocarpon HOM05D004812 ORTHO05D005721 9.2e-64 247.7 184 75.0
Glyma.06G049600 Glycine max HOM05D004812 ORTHO05D005721 1.2e-63 247.3 220 59.1
Gorai.009G222500 Gossypium raimondii HOM05D004812 ORTHO05D005721 1.2e-63 247.3 234 57.3
Gohir.D06G024100 Gossypium hirsutum HOM05D004812 ORTHO05D005721 2.0e-63 246.5 226 60.2
Gorai.010G028600 Gossypium raimondii HOM05D004812 ORTHO05D005721 2.0e-63 246.5 226 60.2
TWI36G1081 Tripterygium wilfordii HOM05D004812 ORTHO05D005721 5.9e-63 245.0 208 61.5
GSVIVG01009286001 Vitis vinifera HOM05D004812 ORTHO05D005721 1.0e-62 244.2 205 65.9
Cpa.g.sc160.27 Carica papaya HOM05D004812 ORTHO05D005721 1.7e-62 243.4 220 59.1
Cc10_g07760 Coffea canephora HOM05D004812 ORTHO05D005721 1.7e-62 243.4 223 60.5
MD15G1064000 Malus domestica HOM05D004812 ORTHO05D005721 1.7e-62 243.4 236 58.9
Manes.05G184100 Manihot esculenta HOM05D004812 ORTHO05D005721 2.9e-62 242.7 203 66.0
Gohir.A06G026800 Gossypium hirsutum HOM05D004812 ORTHO05D005721 6.6e-62 241.5 226 59.3
Gohir.A05G212600 Gossypium hirsutum HOM05D004812 ORTHO05D005721 8.6e-62 241.1 235 55.7
MD08G1076700 Malus domestica HOM05D004812 ORTHO05D005721 1.1e-61 240.7 234 58.1
Thecc.08G083100 Theobroma cacao HOM05D004812 ORTHO05D005721 2.5e-61 239.6 235 57.0
arahy.Tifrunner.gnm1.ann1.HYM163 Arachis hypogaea HOM05D004812 ORTHO05D005721 3.3e-61 239.2 205 61.5
arahy.Tifrunner.gnm1.ann1.PWJU0J Arachis hypogaea HOM05D004812 ORTHO05D005721 3.3e-61 239.2 205 62.0
TPR.G30200 Trifolium pratense HOM05D004812 ORTHO05D005721 3.3e-61 239.2 202 61.9
MSTRG.25014 Avicennia marina HOM05D004812 ORTHO05D005721 5.6e-61 238.4 209 60.8
Nitab4.5_0001494g0140 Nicotiana tabacum HOM05D004812 ORTHO05D005721 9.5e-61 237.7 222 60.8
MBI16_g36640_MAGBIO Magnolia biondii HOM05D004812 ORTHO05D005721 2.8e-60 236.1 203 60.6
RcHm_v2.0_Chr6g0310161 Rosa chinensis HOM05D004812 ORTHO05D005721 2.8e-60 236.1 202 63.9
Lalb_Chr23g0267661 Lupinus albus HOM05D004812 ORTHO05D005721 3.6e-60 235.7 202 59.4
Aqoxy6G02958 Aquilegia oxysepala HOM05D004812 ORTHO05D005721 4.7e-60 235.3 202 62.4
Lsat_1_v5_gn_9_79341 Lactuca sativa HOM05D004812 ORTHO05D005721 8.0e-60 234.6 207 59.4
Duzib093G1850 Durio zibethinus HOM05D004812 ORTHO05D005721 1.4e-59 233.8 235 55.3
FvH4_2g32490 Fragaria vesca HOM05D004812 ORTHO05D005721 1.4e-59 233.8 201 59.7
Peaxi162Scf01161g00329 Petunia axillaris HOM05D004812 ORTHO05D005721 1.8e-59 233.4 202 61.4
Lj4A77G54 Lonicera japonica HOM05D004812 ORTHO05D005721 2.3e-59 233.0 248 54.8
Sed0005944 Sechium edule HOM05D004812 ORTHO05D005721 2.3e-59 233.0 202 62.9
MELO3C010780.2 Cucumis melo HOM05D004812 ORTHO05D005721 5.2e-59 231.9 206 60.7
FAN15G0694 Fragaria x ananassa HOM05D004812 ORTHO05D005721 5.2e-59 231.9 208 58.2
Medtr3g103530 Medicago truncatula HOM05D004812 ORTHO05D005721 5.2e-59 231.9 210 57.1
Dinv39198 Davidia involucrata HOM05D004812 ORTHO05D005721 6.8e-59 231.5 193 63.7
Duzib041G0236 Durio zibethinus HOM05D004812 ORTHO05D005721 8.9e-59 231.1 202 59.9
ClCG08G016760 Citrullus lanatus HOM05D004812 ORTHO05D005721 1.2e-58 230.7 204 60.3
Gohir.D05G215800 Gossypium hirsutum HOM05D004812 ORTHO05D005721 1.5e-58 230.3 212 58.0
Psat5g042400 Pisum sativum HOM05D004812 ORTHO05D005721 1.5e-58 230.3 219 57.5
CAN.G416.6 Capsicum annuum HOM05D004812 ORTHO05D005721 3.4e-58 229.2 202 62.9
CsaV3_2G025860 Cucumis sativus L. HOM05D004812 ORTHO05D005721 3.4e-58 229.2 206 59.7
Eucgr.F02213 Eucalyptus grandis HOM05D004812 ORTHO05D005721 3.4e-58 229.2 201 59.7
MSTRG.923 Avicennia marina HOM05D004812 ORTHO05D005721 4.4e-58 228.8 236 53.8
Ah.05g166930 Amaranthus hybridus HOM05D004812 ORTHO05D005721 9.8e-58 227.6 204 60.8
Sabra02G0090600 Salix brachista HOM05D004812 ORTHO05D005721 1.3e-57 227.3 233 54.9
Sopen04g031020 Solanum pennellii HOM05D004812 ORTHO05D005721 2.2e-57 226.5 202 61.9
Duzib041G0573 Durio zibethinus HOM05D004812 ORTHO05D005721 3.7e-57 225.7 202 59.4
THA.LOC104799834 Tarenaya hassleriana HOM05D004812 ORTHO05D005721 3.7e-57 225.7 224 55.4
Potri.005G146600 Populus trichocarpa HOM05D004812 ORTHO05D005721 4.9e-57 225.3 204 59.8
TWI56G0383 Tripterygium wilfordii HOM05D004812 ORTHO05D005721 4.9e-57 225.3 233 54.5
arahy.Tifrunner.gnm1.ann1.4PX4MG Arachis hypogaea HOM05D004812 ORTHO05D005721 6.4e-57 224.9 224 55.4
Hund05266 Selenicereus undatus HOM05D004812 ORTHO05D005721 6.4e-57 224.9 209 60.8
vmacro04604 Vaccinium macrocarpon HOM05D004812 ORTHO05D005721 8.3e-57 224.6 233 56.2
Solyc04g077430.4 Solanum lycopersicum HOM05D004812 ORTHO05D005721 1.1e-56 224.2 202 61.4
Potri.002G114600 Populus trichocarpa HOM05D004812 ORTHO05D005721 9.2e-56 221.1 232 54.7
ECA232G4694 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.6e-55 220.3 201 58.2
Migut.N02802 Erythranthe guttata HOM05D004812 ORTHO05D005721 3.5e-55 219.2 204 55.9
PSO541G3106 Papaver somniferum HOM05D004812 ORTHO05D005721 1.0e-54 217.6 204 58.3
CANSAT11G0724 Cannabis sativa HOM05D004812 ORTHO05D005721 1.3e-54 217.2 248 54.4
FAN20G0597 Fragaria x ananassa HOM05D004812 ORTHO05D005721 1.3e-54 217.2 187 59.9
FAN27G1358 Fragaria x ananassa HOM05D004812 ORTHO05D005721 1.3e-54 217.2 187 59.9
FAN24G1448 Fragaria x ananassa HOM05D004812 ORTHO05D005721 1.7e-54 216.9 187 59.9
AL6G41350 Arabidopsis lyrata HOM05D004812 ORTHO05D005721 2.3e-54 216.5 203 56.2
EL10Ac1g02340 Beta vulgaris HOM05D004812 ORTHO05D005721 3.0e-54 216.1 204 58.8
Nitab4.5_0024059g0010 Nicotiana tabacum HOM05D004812 ORTHO05D005721 3.0e-54 216.1 172 67.4
Sc02g0008200 Simmondsia chinensis HOM05D004812 ORTHO05D005721 3.0e-54 216.1 167 66.5
Aa31sc619G20 Aethionema arabicum HOM05D004812 ORTHO05D005721 8.6e-54 214.5 202 55.9
PSO675G4508 Papaver somniferum HOM05D004812 ORTHO05D005721 1.9e-53 213.4 204 57.4
Thhalv10028923m.g Eutrema salsugineum HOM05D004812 ORTHO05D005721 4.3e-53 212.2 234 50.4
Rhsim07G0216800 Rhododendron simsii HOM05D004812 ORTHO05D005721 4.3e-53 212.2 311 44.1
Sp6g10230 Schrenkiella parvula HOM05D004812 ORTHO05D005721 4.3e-53 212.2 203 54.2
BcaB01g02879 Brassica carinata HOM05D004812 ORTHO05D005721 2.1e-52 209.9 203 53.7
Oeu048563.2 Olea europaea HOM05D004812 ORTHO05D005721 3.6e-52 209.1 243 50.6
PGR031G3368 Punica granatum HOM05D004812 ORTHO05D005721 6.2e-52 208.4 201 57.7
HanXRQChr08g0226381 Helianthus annuus HOM05D004812 ORTHO05D005721 1.1e-51 207.6 227 48.5
BcaC01g04783 Brassica carinata HOM05D004812 ORTHO05D005721 6.8e-51 204.9 205 53.7
Eucgr.F00104 Eucalyptus grandis HOM05D004812 ORTHO05D005721 2.6e-50 203.0 228 49.1
C03p33720 Brassica napus HOM05D004812 ORTHO05D005721 3.4e-50 202.6 205 53.2
CARHR259230 Cardamine hirsuta HOM05D004812 ORTHO05D005721 4.4e-50 202.2 232 49.1
HanXRQChr04g0110461 Helianthus annuus HOM05D004812 ORTHO05D005721 4.4e-50 202.2 202 55.0
Ca_06989_v3 Cicer arietinum L. HOM05D004812 ORTHO05D005721 5.8e-50 201.8 205 52.7
Glyma.14G090500 Glycine max HOM05D004812 ORTHO05D005721 1.4e-48 197.2 202 52.5
SGA_v2.0_scaffold238G43884 Striga asiatica HOM05D004812 ORTHO05D005721 1.4e-48 197.2 296 43.6
Phvul.001G031700 Phaseolus vulgaris HOM05D004812 ORTHO05D005721 1.9e-48 196.8 202 51.5
Migut.C00441 Erythranthe guttata HOM05D004812 ORTHO05D005721 2.4e-48 196.4 201 52.7
AT4G07990 Arabidopsis thaliana HOM05D004812 ORTHO05D005721 4.1e-48 195.7 216 52.3
Os03g0728100 Oryza sativa ssp. japonica HOM05D004812 ORTHO05D005721 1.2e-47 194.1 231 45.0
Carub.0006s2656 Capsella rubella HOM05D004812 ORTHO05D005721 2.1e-47 193.4 169 58.0
Lalb_Chr24g0399541 Lupinus albus HOM05D004812 ORTHO05D005721 3.5e-47 192.6 202 52.0
Psat6g018520 Pisum sativum HOM05D004812 ORTHO05D005721 3.5e-47 192.6 205 51.7
CDE02G0400 Ceratophyllum demersum HOM05D004812 ORTHO05D005721 6.0e-47 191.8 225 50.7
AUR62039348 Chenopodium quinoa HOM05D004812 ORTHO05D005721 5.1e-46 188.7 236 47.9
Medtr1g017260 Medicago truncatula HOM05D004812 ORTHO05D005721 5.6e-45 185.3 205 49.8
PGSC0003DMG400004945 Solanum tuberosum HOM05D004812 ORTHO05D005721 2.1e-44 183.3 161 60.2
unitig_744.g24118 Utricularia gibba HOM05D004812 ORTHO05D005721 3.6e-44 182.6 207 50.7
COL.COLO4_28448 Corchorus olitorius HOM05D004812 ORTHO05D005721 4.7e-44 182.2 132 67.4
Zm00001eb215650 Zea mays HOM05D004812 ORTHO05D005721 4.7e-44 182.2 202 48.0
Manes.18G050200 Manihot esculenta HOM05D004812 ORTHO05D005721 8.1e-44 181.4 191 56.0
TPR.G13010 Trifolium pratense HOM05D004812 ORTHO05D005721 8.1e-44 181.4 205 47.8
Lj5g0016152 Lotus japonicus HOM05D004812 ORTHO05D005721 8.9e-43 177.9 179 55.3
Oeu038874.1 Olea europaea HOM05D004812 ORTHO05D005721 1.5e-42 177.2 144 61.1
arahy.Tifrunner.gnm1.ann1.FJ07HR Arachis hypogaea HOM05D004812 ORTHO05D005721 4.4e-42 175.6 127 66.1
Sabra05G0117000 Salix brachista HOM05D004812 ORTHO05D005721 9.9e-42 174.5 163 58.3
PGR083G2836 Punica granatum HOM05D004812 ORTHO05D005721 1.7e-41 173.7 201 48.3
ATR0019G011 Amborella trichopoda HOM05D004812 ORTHO05D005721 6.4e-41 171.8 163 57.7
Duzib041G0112 Durio zibethinus HOM05D004812 ORTHO05D005721 4.6e-39 165.6 131 63.4
HPP92_028656 Vanilla planifolia HOM05D004812 ORTHO05D005721 5.6e-37 158.7 192 50.0
Zm00001eb299310 Zea mays HOM05D004812 ORTHO05D005721 1.6e-36 157.1 227 43.2
ECA247G0897 Erigeron canadensis HOM05D004812 ORTHO05D005721 2.4e-35 153.3 167 47.3
A03p27930 Brassica napus HOM05D004812 ORTHO05D005721 4.0e-35 152.5 152 52.6
BolC3t15691H Brassica oleracea HOM05D004812 ORTHO05D005721 4.0e-35 152.5 152 52.6
BraA03t12006Z Brassica rapa HOM05D004812 ORTHO05D005721 4.0e-35 152.5 152 52.6
Os07g0124800 Oryza sativa ssp. japonica HOM05D004812 ORTHO05D005721 4.0e-35 152.5 217 42.4
VMungo0647G0241 Vigna mungo HOM05D004812 ORTHO05D005721 2.0e-34 150.2 149 55.0
Medtr3g103520 Medicago truncatula HOM05D004812 ORTHO05D005721 2.2e-33 146.7 195 44.6
CSS0043183 Camellia sinensis var. sinensis HOM05D004812 ORTHO05D005721 2.9e-33 146.4 187 50.8
AUR62034973 Chenopodium quinoa HOM05D004812 ORTHO05D005721 1.2e-28 131.0 196 47.4
HanXRQChr08g0231951 Helianthus annuus HOM05D004812 ORTHO05D005721 1.7e-17 94.0 78 56.4
HPP92_011733 Vanilla planifolia HOM05D004812 ORTHO05D005721 3.2e-16 89.7 63 65.1
Mapoly0153s0040 Marchantia polymorpha HOM05D004812 ORTHO05D005721 1.3e-14 84.3 195 33.8
Glyma.17G232245 Glycine max HOM05D004812 ORTHO05D005721 1.5e-13 80.9 100 48.0
AagrBONN_evm.TU.Sc2ySwM_344.5440 Anthoceros agrestis HOM05D004812 ORTHO05D005721 3.3e-13 79.7 141 36.9
Mapoly0001s0190 Marchantia polymorpha HOM05D004812 ORTHO05D005721 1.6e-12 77.4 150 37.3
Glyma.14G121300 Glycine max HOM05D004812 ORTHO05D005721 2.4e-11 73.6 62 54.8
Pp3c17_7620 Physcomitrium patens HOM05D004812 ORTHO05D005721 1.5e-10 70.9 166 30.7
AagrBONN_evm.TU.Sc2ySwM_228.2797 Anthoceros agrestis HOM05D004812 ORTHO05D005721 2.0e-10 70.5 223 30.0
Phvul.L001695 Phaseolus vulgaris HOM05D004812 ORTHO05D005721 5.8e-10 68.9 95 42.1
SMO351G0516 Selaginella moellendorffii HOM05D004812 ORTHO05D005721 2.9e-09 66.6 167 31.1
HPP92_017697 Vanilla planifolia HOM05D001988 ORTHO05D006298 1.3e-06 57.8 45 62.2
SEGI_24355 Sequoiadendron giganteum HOM05D004812 ORTHO05D005721 6.7e-06 55.5 54 53.7


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