Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 1.5e-192 676.0 344 100.0
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 1.3e-127 460.3 350 74.3
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.1e-78 297.7 361 53.7
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.3e-63 246.9 349 47.0
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 1.1e-54 218.0 371 42.6
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 9.2e-49 198.4 399 39.8
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.4e-44 184.5 346 40.2
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 1.8e-44 184.1 376 37.5
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 3.1e-44 183.3 373 39.7
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 6.8e-44 182.2 359 39.3
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.3e-42 177.9 397 38.8
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 1.9e-41 174.1 350 37.1
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 1.6e-40 171.0 373 35.7
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 2.7e-40 170.2 352 37.2
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 6.0e-40 169.1 382 35.9
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 1.0e-39 168.3 373 35.9
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 2.3e-39 167.2 346 37.9
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 5.6e-38 162.5 351 36.8
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 9.6e-38 161.8 212 49.1
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 8.1e-37 158.7 396 36.6
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 8.9e-36 155.2 376 30.9
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 2.6e-35 153.7 375 35.2
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 9.9e-35 151.8 369 33.6
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 9.9e-35 151.8 387 35.9
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 2.2e-34 150.6 326 36.5
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 2.9e-34 150.2 363 34.2
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 2.9e-34 150.2 363 34.2
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 1.1e-33 148.3 366 33.3
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 1.1e-33 148.3 369 32.2
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 4.2e-33 146.4 368 33.7
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 4.2e-33 146.4 363 32.5
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 5.4e-33 146.0 348 35.6
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 2.7e-32 143.7 376 33.5
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 6.0e-32 142.5 367 32.7
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 1.3e-31 141.4 374 34.0
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 2.3e-31 140.6 403 33.3
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 6.6e-31 139.0 387 32.0
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.5e-30 137.9 359 33.1
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 1.9e-30 137.5 346 32.1
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.9e-30 137.5 377 34.0
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 3.3e-30 136.7 400 32.2
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 3.3e-30 136.7 131 52.7
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 4.3e-30 136.3 403 31.8
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 7.3e-30 135.6 290 39.3
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.3e-29 134.8 367 33.5
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.1e-29 134.0 357 33.6
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 3.6e-29 133.3 345 33.3
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 4.0e-28 129.8 335 31.6
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 6.9e-28 129.0 335 31.6
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.2e-27 128.3 335 31.3
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.5e-27 127.9 369 33.6
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.0e-27 127.5 363 33.1
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 2.6e-27 127.1 275 36.0
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 1.7e-26 124.4 373 31.4
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 2.9e-26 123.6 357 33.1
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 3.8e-26 123.2 366 33.1
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 4.9e-26 122.9 275 34.9
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 4.9e-26 122.9 351 33.9
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 6.4e-26 122.5 365 30.7
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 1.9e-25 120.9 373 31.9
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 3.2e-25 120.2 356 31.2
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 4.2e-25 119.8 347 32.0
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 1.2e-24 118.2 352 29.5
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 1.0e-23 115.2 362 29.6
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 5.1e-23 112.8 343 30.6
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 8.7e-23 112.1 366 31.7
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 3.3e-22 110.2 325 33.2
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 5.6e-22 109.4 372 30.1
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 2.1e-21 107.5 367 28.6
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 4.8e-21 106.3 200 35.0
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 6.2e-21 105.9 115 49.6
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.1e-20 105.1 341 31.7
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 3.1e-20 103.6 347 30.5
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 3.1e-20 103.6 364 27.7
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 1.5e-19 101.3 353 30.0
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 2.0e-19 100.9 329 30.4
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 2.6e-19 100.5 362 32.9
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 3.4e-19 100.1 373 30.0
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 3.4e-19 100.1 368 30.2
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 5.8e-19 99.4 353 28.9
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 1.3e-18 98.2 342 31.3
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 4.9e-18 96.3 214 34.1
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 3.2e-17 93.6 339 29.5
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 4.2e-17 93.2 362 27.6
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 5.5e-17 92.8 365 29.0
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 7.1e-17 92.4 366 30.9
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 7.1e-17 92.4 355 30.1
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 1.2e-16 91.7 330 28.8
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 3.5e-16 90.1 341 28.7
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 3.5e-16 90.1 376 27.9
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 7.9e-16 89.0 354 26.8
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 1.0e-15 88.6 371 29.9
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 1.0e-15 88.6 369 28.7
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 6.7e-15 85.9 190 35.8
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 1.5e-14 84.7 350 29.4
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 1.3e-13 81.6 360 26.4
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 1.6e-13 81.3 373 26.5
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 2.8e-13 80.5 359 26.5
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 2.8e-13 80.5 344 27.0
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 6.2e-13 79.3 360 28.1
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 8.1e-13 79.0 355 26.8
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 3.1e-12 77.0 348 29.6
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 9.0e-12 75.5 347 25.9
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 4.5e-11 73.2 182 30.8
CDE02G2198 Ceratophyllum demersum HOM05D006874 ORTHO05D008334 7.6e-11 72.4 345 26.7
COL.COLO4_28465 Corchorus olitorius HOM05D006874 ORTHO05D008334 8.4e-10 68.9 165 35.8
Gorai.002G136000 Gossypium raimondii HOM05D006874 ORTHO05D008334 9.3e-09 65.5 347 27.4
Gohir.A01G123500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.1e-08 64.3 344 28.8
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 2.7e-08 63.9 357 25.8
RhsimUnG0041100 Rhododendron simsii HOM05D063883 ORTHO05D008334 3.9e-07 60.1 362 24.0
RhsimUnG0123100 Rhododendron simsii HOM05D063883 ORTHO05D008334 3.9e-07 60.1 362 24.0
Migut.O00023 Erythranthe guttata HOM05D006874 ORTHO05D008334 6.7e-07 59.3 151 34.4
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 6.7e-07 59.3 137 37.2
Gohir.D01G111300 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.5e-06 57.4 340 24.7
arahy.Tifrunner.gnm1.ann1.0IC8QA Arachis hypogaea HOM05D006874 ORTHO05D008334 7.4e-06 55.8 235 28.1


User provided reference genes

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