Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0048900 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.6e-144 514.6 334 100.0
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.8e-100 369.0 258 80.2
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.3e-83 312.8 424 48.6
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-61 240.7 424 57.3
Rhsim01G0183600 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.9e-31 139.4 155 56.1
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 9.3e-22 108.6 144 81.9
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 2.3e-20 104.0 370 31.9
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 7.4e-19 99.0 319 32.6
Rhsim05G0127300 Rhododendron simsii HOM05D024557 ORTHO05D010234 3.8e-15 86.7 142 41.5
RhsimUnG0063900 Rhododendron simsii HOM05D024557 ORTHO05D010234 6.1e-13 79.3 190 32.1
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 7.9e-13 79.0 374 27.5
RhsimUnG0134700 Rhododendron simsii HOM05D024557 ORTHO05D010234 1.0e-12 78.6 190 32.1
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.3e-12 77.4 228 32.9
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.3e-12 77.4 100 42.0
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.1e-12 76.3 352 29.8
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 4.3e-11 73.2 115 40.0
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.2e-10 70.9 250 28.0
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 6.3e-10 69.3 333 28.5
Rhsim12G0134900 Rhododendron simsii HOM05D024557 ORTHO05D010234 8.2e-10 68.9 98 50.0
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 3.1e-09 67.0 85 45.9
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 4.1e-09 66.6 61 55.7
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 6.9e-09 65.9 85 44.7
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 6.9e-09 65.9 85 44.7
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 6.9e-09 65.9 85 44.7
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 1.2e-08 65.1 241 30.3
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.0e-08 64.3 131 37.4
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-07 61.6 217 28.1
CSS0011165 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.5e-06 57.4 51 52.9
CSS0019851 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.5e-06 57.4 51 52.9
CSS0048637 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 7.2e-06 55.8 61 45.9
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 9.4e-06 55.5 110 38.2


User provided reference genes

Program Settings