Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0044600 Rhododendron simsii HOM05D009663 ORTHO05D007789 7.4e-124 447.2 225 100.0
Rhsim06G0041600 Rhododendron simsii HOM05D000163 ORTHO05D000962 6.7e-24 115.2 158 46.2
Rhsim12G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.5e-23 114.0 138 46.4
Rhsim12G0082100 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.1e-21 106.3 146 43.8
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.5e-15 87.4 139 39.6
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.6e-15 86.7 141 37.6
vmacro01230 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 3.3e-15 86.3 144 34.7
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.7e-14 84.0 152 37.5
vmacro05103 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 2.8e-14 83.2 154 36.4
Rhsim06G0038200 Rhododendron simsii HOM05D038451 ORTHO05D007789 4.8e-14 82.4 182 35.2
Rhsim07G0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.8e-14 82.4 152 38.8
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 1.2e-12 77.8 166 36.7
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 1.2e-12 77.8 159 38.4
Rhsim06G0038400 Rhododendron simsii HOM05D038451 ORTHO05D007789 1.6e-12 77.4 139 41.0
Rhsim12G0034900 Rhododendron simsii HOM05D042119 ORTHO05D007789 1.7e-11 73.9 139 40.3
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.2e-11 73.6 166 33.1
vmacro13892 Vaccinium macrocarpon HOM05D000906 ORTHO05D000713 2.2e-11 73.6 108 37.0
Rhsim06G0049300 Rhododendron simsii HOM05D031946 ORTHO05D007789 2.9e-11 73.2 137 38.7
Rhsim07G0120100 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.5e-10 70.9 140 38.6
Rhsim08G0153800 Rhododendron simsii HOM05D042119 ORTHO05D007789 2.5e-10 70.1 156 34.6
vmacro14314 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 4.2e-10 69.3 117 36.8
Rhsim10G0207200 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.2e-09 67.8 147 33.3
Rhsim06G0060500 Rhododendron simsii HOM05D031946 ORTHO05D007789 2.7e-09 66.6 131 34.4
Nitab4.5_0000613g0220 Nicotiana tabacum HOM05D010354 ORTHO05D012840 6.1e-09 65.5 135 31.1
RhsimUnG0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.1e-09 65.5 160 35.0
Rhsim04G0228600 Rhododendron simsii HOM05D009663 ORTHO05D011812 8.0e-09 65.1 130 32.3
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 1.4e-08 64.3 131 31.3
PGSC0003DMG400006633 Solanum tuberosum HOM05D010354 ORTHO05D012840 1.4e-08 64.3 122 32.0
Rhsim09G0029000 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.3e-08 63.5 134 33.6
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 3.0e-08 63.2 134 32.1
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 4.0e-08 62.8 125 28.8
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 6.7e-08 62.0 120 30.0
Rhsim12G0199500 Rhododendron simsii HOM05D000727 ORTHO05D000541 8.8e-08 61.6 117 35.0
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.5e-07 60.8 133 28.6
Peaxi162Scf00045g00629 Petunia axillaris HOM05D010354 ORTHO05D012840 2.6e-07 60.1 122 31.1
PGSC0003DMG400012275 Solanum tuberosum HOM05D008744 ORTHO05D010647 2.6e-07 60.1 123 30.1
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.3e-07 59.7 127 31.5
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.3e-07 59.7 160 32.5
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.7e-07 58.9 142 32.4
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 5.7e-07 58.9 121 29.8
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 7.5e-07 58.5 113 29.2
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 9.7e-07 58.2 114 29.8
PGSC0003DMG402009490 Solanum tuberosum HOM05D010354 ORTHO05D012840 1.3e-06 57.8 144 27.8
CAN.G1522.9 Capsicum annuum HOM05D010354 ORTHO05D012840 1.7e-06 57.4 114 30.7
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 1.7e-06 57.4 120 28.3
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 2.2e-06 57.0 156 28.2
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.7e-06 56.2 145 28.3
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 4.8e-06 55.8 156 27.6
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 4.8e-06 55.8 135 28.9
CiPaw.10G106400 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.8e-06 55.8 113 28.3
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 6.3e-06 55.5 149 27.5
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.3e-06 55.5 113 28.3
RhsimUnG0148900 Rhododendron simsii HOM05D009663 ORTHO05D011812 6.3e-06 55.5 114 31.6
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 8.2e-06 55.1 110 30.0
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 8.2e-06 55.1 131 29.0


User provided reference genes

Program Settings