Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0043500 Rhododendron simsii HOM05D010878 ORTHO05D009673 1.1e-89 333.6 211 100.0
Rhsim06G0043800 Rhododendron simsii HOM05D000097 ORTHO05D009673 2.5e-65 252.7 202 78.7
Rhsim06G0042700 Rhododendron simsii HOM05D010878 ORTHO05D009673 5.1e-58 228.4 202 62.9
Rhsim06G0042400 Rhododendron simsii HOM05D010878 ORTHO05D009673 3.1e-55 219.2 209 66.5
Rhsim06G0042600 Rhododendron simsii HOM05D010878 ORTHO05D009673 6.9e-55 218.0 209 66.5
Rhsim06G0042900 Rhododendron simsii HOM05D010878 ORTHO05D009673 3.0e-50 202.6 203 66.5
Rhsim06G0044000 Rhododendron simsii HOM05D010878 ORTHO05D009673 2.6e-25 119.8 157 47.1
CSS0026496 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 2.3e-18 96.7 209 34.0
Actinidia38166 Actinidia chinensis HOM05D000097 ORTHO05D009673 2.0e-17 93.6 205 33.7
CAN.G84.45 Capsicum annuum HOM05D010878 ORTHO05D009673 4.8e-16 89.0 191 33.5
Nitab4.5_0000888g0040 Nicotiana tabacum HOM05D000097 ORTHO05D009673 4.8e-16 89.0 121 43.8
CSS0048318 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 8.2e-16 88.2 123 42.3
Solyc09g098050.2 Solanum lycopersicum HOM05D000097 ORTHO05D009673 8.2e-16 88.2 116 44.0
Sopen09g035970 Solanum pennellii HOM05D000097 ORTHO05D009673 8.2e-16 88.2 112 44.6
Cc11_g06000 Coffea canephora HOM05D010878 ORTHO05D009673 3.1e-15 86.3 117 44.4
Solyc09g098060.3 Solanum lycopersicum HOM05D000097 ORTHO05D009673 3.1e-15 86.3 112 43.8
Cc11_g06180 Coffea canephora HOM05D000097 ORTHO05D009673 9.1e-15 84.7 117 42.7
CSS0022179 Camellia sinensis var. sinensis HOM05D010878 ORTHO05D009673 1.6e-14 84.0 200 39.0
Cc11_g05990 Coffea canephora HOM05D000097 ORTHO05D009673 1.6e-14 84.0 117 41.9
Cc07_g18350 Coffea canephora HOM05D000097 ORTHO05D009673 2.6e-14 83.2 129 41.9
Nitab4.5_0000533g0020 Nicotiana tabacum HOM05D000097 ORTHO05D009673 2.6e-14 83.2 120 40.8
Sopen09g035980 Solanum pennellii HOM05D000097 ORTHO05D009673 2.6e-14 83.2 112 42.9
Actinidia38167 Actinidia chinensis HOM05D010878 ORTHO05D009673 1.1e-12 77.8 207 30.0
Peaxi162Scf00389g00031 Petunia axillaris HOM05D000097 ORTHO05D009673 7.2e-12 75.1 97 42.3
CSS0014543 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 9.4e-12 74.7 148 44.6
CSS0032671 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 1.2e-11 74.3 132 40.9
CSS0048371 Camellia sinensis var. sinensis HOM05D010878 ORTHO05D009673 2.1e-11 73.6 101 40.6
Nitab4.5_0012294g0050 Nicotiana tabacum HOM05D010878 ORTHO05D009673 6.1e-11 72.0 98 42.9
Rhsim04G0081700 Rhododendron simsii HOM05D000149 ORTHO05D009673 1.8e-10 70.5 116 35.3
vmacro09222 Vaccinium macrocarpon HOM05D000097 ORTHO05D009673 4.0e-10 69.3 112 35.7
Rhsim05G0188900 Rhododendron simsii HOM05D000097 ORTHO05D009673 6.8e-10 68.6 117 41.0
Rhsim10G0154500 Rhododendron simsii HOM05D010878 ORTHO05D009673 8.8e-10 68.2 118 37.3
Rhsim05G0189100 Rhododendron simsii HOM05D000097 ORTHO05D009673 2.6e-09 66.6 81 48.1
RhsimUnG0219000 Rhododendron simsii HOM05D010878 ORTHO05D009673 3.7e-08 62.8 116 34.5
Nitab4.5_0001693g0050 Nicotiana tabacum HOM05D010878 ORTHO05D009673 4.8e-08 62.4 95 40.0
Actinidia26770 Actinidia chinensis HOM05D010878 ORTHO05D009673 1.1e-07 61.2 145 31.0
CAN.G799.9 Capsicum annuum HOM05D000264 ORTHO05D009673 9.1e-07 58.2 84 36.9
Peaxi162Scf00312g00612 Petunia axillaris HOM05D000097 ORTHO05D009673 5.9e-06 55.5 82 36.6


User provided reference genes

Program Settings