Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0042400 Rhododendron simsii HOM05D010878 ORTHO05D009673 4.9e-112 407.9 220 100.0
Rhsim06G0042600 Rhododendron simsii HOM05D010878 ORTHO05D009673 2.7e-110 402.1 220 98.6
Rhsim06G0042700 Rhododendron simsii HOM05D010878 ORTHO05D009673 3.1e-82 308.9 173 88.4
Rhsim06G0043800 Rhododendron simsii HOM05D000097 ORTHO05D009673 6.3e-59 231.5 214 62.6
Rhsim06G0043500 Rhododendron simsii HOM05D010878 ORTHO05D009673 1.1e-55 220.7 209 66.5
Rhsim06G0042900 Rhododendron simsii HOM05D010878 ORTHO05D009673 5.5e-55 218.4 175 76.6
Rhsim06G0044000 Rhododendron simsii HOM05D010878 ORTHO05D009673 1.6e-30 137.1 177 51.4
CSS0048318 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 8.6e-24 114.8 173 48.6
CSS0026496 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 3.3e-23 112.8 173 39.9
Cc11_g05990 Coffea canephora HOM05D000097 ORTHO05D009673 1.2e-20 104.4 173 37.6
Cc11_g06180 Coffea canephora HOM05D000097 ORTHO05D009673 2.0e-20 103.6 164 38.4
Cc11_g06000 Coffea canephora HOM05D010878 ORTHO05D009673 4.4e-20 102.4 195 44.1
CSS0022179 Camellia sinensis var. sinensis HOM05D010878 ORTHO05D009673 8.3e-19 98.2 169 47.3
Actinidia38166 Actinidia chinensis HOM05D000097 ORTHO05D009673 1.1e-18 97.8 173 36.4
Cc07_g18350 Coffea canephora HOM05D000097 ORTHO05D009673 1.1e-18 97.8 176 36.9
Solyc09g098050.2 Solanum lycopersicum HOM05D000097 ORTHO05D009673 7.0e-18 95.1 112 44.6
CSS0014543 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 1.6e-17 94.0 168 45.8
CAN.G84.45 Capsicum annuum HOM05D010878 ORTHO05D009673 4.6e-17 92.4 146 37.0
Actinidia38167 Actinidia chinensis HOM05D010878 ORTHO05D009673 3.0e-16 89.7 179 34.1
Sopen09g035970 Solanum pennellii HOM05D000097 ORTHO05D009673 3.0e-16 89.7 109 44.0
Peaxi162Scf00389g00031 Petunia axillaris HOM05D000097 ORTHO05D009673 5.0e-16 89.0 164 43.3
Nitab4.5_0000888g0040 Nicotiana tabacum HOM05D000097 ORTHO05D009673 6.6e-16 88.6 165 43.6
CSS0032671 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 8.6e-16 88.2 166 42.2
CSS0048371 Camellia sinensis var. sinensis HOM05D010878 ORTHO05D009673 8.6e-16 88.2 133 36.1
vmacro09222 Vaccinium macrocarpon HOM05D000097 ORTHO05D009673 1.9e-15 87.0 193 31.6
Nitab4.5_0000533g0020 Nicotiana tabacum HOM05D000097 ORTHO05D009673 7.3e-15 85.1 165 43.0
Rhsim10G0154500 Rhododendron simsii HOM05D010878 ORTHO05D009673 7.3e-15 85.1 164 32.3
Solyc09g098060.3 Solanum lycopersicum HOM05D000097 ORTHO05D009673 2.1e-14 83.6 109 42.2
Sopen09g035980 Solanum pennellii HOM05D000097 ORTHO05D009673 1.8e-13 80.5 109 41.3
RhsimUnG0219000 Rhododendron simsii HOM05D010878 ORTHO05D009673 3.1e-13 79.7 164 31.7
Rhsim05G0188900 Rhododendron simsii HOM05D000097 ORTHO05D009673 4.0e-13 79.3 134 37.3
Rhsim04G0081700 Rhododendron simsii HOM05D000149 ORTHO05D009673 2.0e-12 77.0 164 30.5
Nitab4.5_0012294g0050 Nicotiana tabacum HOM05D010878 ORTHO05D009673 4.4e-12 75.9 97 43.3
CAN.G799.9 Capsicum annuum HOM05D000264 ORTHO05D009673 1.7e-11 73.9 175 31.4
Rhsim05G0189100 Rhododendron simsii HOM05D000097 ORTHO05D009673 6.4e-11 72.0 133 37.6
Actinidia26770 Actinidia chinensis HOM05D010878 ORTHO05D009673 1.9e-10 70.5 117 37.6
DCAR_001312 Daucus carota HOM05D000097 ORTHO05D009673 9.2e-10 68.2 165 32.7
Peaxi162Scf00312g00612 Petunia axillaris HOM05D000097 ORTHO05D009673 1.2e-09 67.8 140 30.7
DCAR_001308 Daucus carota HOM05D000097 ORTHO05D009673 1.6e-09 67.4 202 26.7
Nitab4.5_0001693g0050 Nicotiana tabacum HOM05D010878 ORTHO05D009673 2.7e-09 66.6 91 42.9
CSS0031156 Camellia sinensis var. sinensis HOM05D010878 ORTHO05D009673 4.6e-09 65.9 167 30.5
TAR636G0150 Trochodendron aralioides HOM05D000097 ORTHO05D009673 5.0e-08 62.4 144 31.9
ATR0049G043 Amborella trichopoda HOM05D000097 ORTHO05D000041 6.6e-08 62.0 135 29.6
DCAR_006030 Daucus carota HOM05D000097 ORTHO05D009673 5.6e-07 58.9 192 26.6
Aqoxy1G02935 Aquilegia oxysepala HOM05D000097 ORTHO05D000041 9.5e-07 58.2 143 28.0
ATR0049G030 Amborella trichopoda HOM05D010878 ORTHO05D009673 1.2e-06 57.8 136 26.5
ATR0049G029 Amborella trichopoda HOM05D000097 ORTHO05D000041 2.8e-06 56.6 135 29.6
Duzib212G0087 Durio zibethinus HOM05D000097 ORTHO05D000041 6.2e-06 55.5 144 35.4
Nitab4.5_0000676g0060 Nicotiana tabacum HOM05D000097 ORTHO05D000041 6.2e-06 55.5 94 42.6


User provided reference genes

Program Settings