Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.9e-196 688.3 340 100.0
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 8.2e-175 617.1 331 91.5
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 5.2e-153 544.7 334 80.2
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.1e-150 537.0 334 81.4
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 1.0e-148 530.4 334 77.5
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.9e-148 528.9 334 78.4
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 8.6e-148 527.3 329 80.5
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 7.2e-147 524.2 334 77.5
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.3e-143 513.5 323 77.7
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 4.9e-143 511.5 323 77.7
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 1.7e-140 503.1 334 74.0
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 6.6e-140 501.1 334 73.4
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 1.5e-139 500.0 334 73.4
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 3.6e-138 495.4 334 71.9
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 8.0e-138 494.2 334 72.5
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 1.8e-137 493.0 334 71.6
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 8.9e-137 490.7 333 73.3
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 1.2e-136 490.3 317 74.8
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 4.4e-136 488.4 332 71.7
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 5.8e-136 488.0 334 71.3
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 1.3e-135 486.9 334 71.0
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 2.9e-135 485.7 339 70.5
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 6.4e-135 484.6 334 71.0
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 6.4e-135 484.6 334 70.7
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 8.3e-135 484.2 333 72.1
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.4e-134 483.4 334 70.4
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 1.4e-134 483.4 326 70.9
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.4e-134 483.4 334 71.9
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 3.2e-134 482.3 318 73.9
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 4.1e-134 481.9 318 73.3
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 4.6e-133 478.4 331 70.1
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 4.6e-133 478.4 330 70.6
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 1.0e-132 477.2 334 69.8
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 1.7e-132 476.5 327 70.6
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 2.3e-132 476.1 334 71.0
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 1.1e-131 473.8 334 69.8
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.9e-131 473.0 331 70.7
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 4.3e-131 471.9 334 67.7
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 5.6e-131 471.5 321 69.5
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 7.3e-131 471.1 322 68.9
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 7.3e-131 471.1 334 71.0
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 1.6e-130 469.9 322 68.3
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.6e-130 469.9 334 70.7
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 2.1e-130 469.5 334 68.9
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 4.7e-130 468.4 333 67.9
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 6.2e-130 468.0 326 69.3
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 1.4e-129 466.8 334 69.2
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 2.3e-129 466.1 334 67.4
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 5.2e-129 464.9 330 68.8
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 5.2e-129 464.9 321 69.8
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 5.2e-129 464.9 321 68.5
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.2e-128 463.8 331 69.5
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 2.0e-128 463.0 330 68.2
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 5.8e-128 461.5 335 67.2
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 7.5e-128 461.1 335 66.9
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 7.5e-128 461.1 329 68.1
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 9.8e-128 460.7 334 65.9
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 2.2e-127 459.5 342 66.1
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 2.2e-127 459.5 334 65.9
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 2.9e-127 459.1 319 68.3
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 2.9e-127 459.1 319 68.3
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 2.9e-127 459.1 319 68.3
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 2.9e-127 459.1 341 66.3
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 3.7e-127 458.8 350 64.3
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 3.7e-127 458.8 319 69.0
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 4.9e-127 458.4 334 67.4
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 8.3e-127 457.6 341 66.3
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 8.3e-127 457.6 334 68.9
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.4e-126 456.8 335 66.0
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 1.9e-126 456.4 319 68.3
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 1.9e-126 456.4 319 68.3
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 7.1e-126 454.5 334 67.7
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 1.2e-125 453.8 340 64.7
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 2.7e-125 452.6 335 66.0
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 2.7e-125 452.6 334 68.3
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 1.0e-124 450.7 335 66.0
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 6.6e-124 448.0 310 70.3
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 1.2e-122 443.7 333 66.1
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 9.9e-120 434.1 320 66.9
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 3.7e-119 432.2 330 67.3
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 1.1e-118 430.6 334 64.1
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.7e-116 423.3 336 62.8
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 8.6e-116 421.0 317 64.0
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.5e-115 420.2 330 61.8
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 3.3e-115 419.1 321 64.5
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 4.3e-115 418.7 334 63.5
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 2.8e-114 416.0 321 62.6
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.6e-114 415.6 317 66.6
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 8.4e-111 404.4 331 61.6
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 4.2e-102 375.6 303 61.7
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 2.8e-98 362.8 309 57.9
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.3e-95 354.0 289 60.6
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.1e-94 350.9 318 56.0
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 5.1e-84 315.5 203 74.9
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 7.4e-83 311.6 322 50.3
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.1e-82 310.1 307 53.1
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 4.1e-81 305.8 200 73.0
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 6.9e-81 305.1 303 52.5
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.6e-77 293.9 262 58.0
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.3e-75 286.2 157 88.5
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 3.7e-74 282.7 215 66.0
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 8.8e-68 261.5 204 61.8
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 3.2e-62 243.0 184 63.0
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.0e-60 236.5 157 69.4
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 5.1e-60 235.7 130 83.1
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 9.7e-59 231.5 156 73.7
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 8.0e-53 211.8 242 50.8
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.7e-50 204.1 282 43.6
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.9e-46 190.7 135 71.9
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.1e-45 187.2 133 68.4
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.8e-44 184.1 155 60.6
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 1.6e-37 161.0 86 82.6
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.5e-32 143.3 129 59.7
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.4e-27 126.7 88 67.0
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 8.0e-21 105.5 72 69.4
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 3.7e-18 96.7 212 37.7
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 7.3e-14 82.4 88 51.1
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 8.9e-12 75.5 173 32.4
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 3.0e-07 60.5 129 33.3


User provided reference genes

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