Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 1.6e-166 589.3 289 100.0
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 4.3e-140 501.5 342 74.6
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 4.4e-137 491.5 308 77.3
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.7e-136 489.6 313 76.0
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 2.2e-136 489.2 308 76.3
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 2.2e-136 489.2 311 78.5
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 2.8e-131 472.2 311 73.3
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 4.0e-130 468.4 324 72.5
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 1.5e-129 466.5 296 77.0
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.5e-129 466.5 309 71.8
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 1.0e-125 453.8 305 73.8
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 1.5e-124 449.9 307 71.0
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 3.3e-124 448.7 311 70.1
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 5.6e-124 448.0 306 70.6
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 3.6e-123 445.3 306 69.9
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 1.1e-122 443.7 311 69.5
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 5.3e-122 441.4 308 69.2
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 1.5e-121 439.9 311 68.5
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 1.5e-121 439.9 302 68.5
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 3.4e-121 438.7 313 68.7
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 3.4e-121 438.7 305 68.9
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 3.4e-121 438.7 309 69.6
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 4.4e-121 438.3 303 68.0
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 9.9e-121 437.2 311 69.1
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 8.4e-120 434.1 312 68.3
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 1.4e-119 433.3 311 67.2
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 1.4e-119 433.3 306 69.3
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 1.9e-119 433.0 340 63.2
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 3.2e-119 432.2 280 75.0
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 3.2e-119 432.2 306 67.6
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 7.1e-119 431.0 270 77.4
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 3.5e-118 428.7 305 67.9
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 4.6e-118 428.3 307 66.1
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 1.3e-117 426.8 306 67.3
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 3.9e-117 425.2 302 67.9
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 5.1e-117 424.9 307 66.1
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 5.1e-117 424.9 292 69.9
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 6.6e-117 424.5 307 68.7
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 6.6e-117 424.5 301 67.4
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 8.7e-117 424.1 306 67.0
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 1.1e-116 423.7 307 66.4
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 1.9e-116 422.9 306 65.7
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 2.5e-116 422.5 306 65.7
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 3.3e-116 422.2 303 67.3
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 3.3e-116 422.2 311 66.2
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 1.3e-115 420.2 304 67.1
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 2.8e-115 419.1 312 65.4
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 6.2e-115 417.9 304 65.1
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 6.2e-115 417.9 313 65.5
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 6.2e-115 417.9 305 64.6
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 1.1e-114 417.2 305 66.9
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 1.1e-114 417.2 305 66.6
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 1.1e-114 417.2 302 66.9
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 1.4e-114 416.8 306 64.4
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 2.4e-114 416.0 306 66.3
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 3.1e-114 415.6 302 66.6
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 3.1e-114 415.6 310 64.8
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 6.9e-114 414.5 308 65.3
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 1.2e-113 413.7 306 65.7
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 1.2e-113 413.7 311 65.3
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 1.3e-112 410.2 305 63.3
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 2.2e-112 409.5 319 62.7
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 3.8e-112 408.7 303 63.4
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 8.4e-112 407.5 297 65.0
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 1.4e-111 406.8 306 63.4
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 1.9e-111 406.4 305 63.3
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 1.9e-111 406.4 306 63.4
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 9.3e-111 404.1 297 63.3
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 9.3e-111 404.1 306 64.1
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 2.7e-110 402.5 309 61.5
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 1.0e-109 400.6 307 61.2
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 1.0e-109 400.6 297 63.0
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 6.7e-109 397.9 305 62.3
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 8.7e-109 397.5 307 61.9
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 1.9e-108 396.4 327 59.6
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 1.9e-108 396.4 308 62.3
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 9.6e-108 394.0 307 61.6
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 2.8e-107 392.5 337 58.2
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 2.8e-107 392.5 307 61.6
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 3.7e-107 392.1 300 63.7
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 6.2e-107 391.3 283 68.2
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 8.1e-107 391.0 368 54.6
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 1.4e-106 390.2 307 60.9
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 3.1e-106 389.0 312 61.5
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 2.6e-105 386.0 277 65.3
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 1.4e-103 380.2 308 60.1
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 3.5e-102 375.6 286 62.2
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 6.0e-102 374.8 309 61.2
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 3.9e-101 372.1 285 67.0
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 8.2e-99 364.4 310 59.0
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 1.2e-94 350.5 282 61.7
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 1.3e-93 347.1 282 61.7
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.5e-92 343.6 311 56.6
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 3.1e-90 335.9 306 56.2
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 4.2e-87 325.5 303 53.5
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 4.2e-87 325.5 314 51.6
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 9.4e-87 324.3 272 62.5
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 1.2e-86 323.9 303 54.8
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 1.4e-85 320.5 288 54.9
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 2.3e-85 319.7 299 53.8
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 7.2e-79 298.1 303 50.8
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 2.0e-76 290.0 283 54.1
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 3.3e-76 289.3 311 50.2
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 8.2e-75 284.6 224 61.6
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 4.5e-73 278.9 308 48.1
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 1.9e-71 273.5 220 60.5
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 9.4e-71 271.2 224 58.0
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 2.7e-70 269.6 176 69.9
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 1.3e-67 260.8 171 71.3
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 8.5e-64 248.1 201 61.7
Actinidia17028 Actinidia chinensis HOM05D005792 ORTHO05D007171 2.7e-62 243.0 165 73.3
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 8.8e-61 238.0 192 63.5
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 7.5e-60 235.0 172 64.0
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 9.1e-58 228.0 166 68.1
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 3.8e-56 222.6 217 53.9
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 1.2e-54 217.6 230 52.2
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 1.6e-54 217.2 284 43.7
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 3.0e-53 213.0 158 62.0
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 3.4e-52 209.5 398 34.7
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 2.5e-47 193.4 208 49.5
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.0e-45 188.0 131 71.0
TPR.G753 Trifolium pratense HOM05D005792 ORTHO05D007171 1.6e-41 174.1 113 73.5
TAR625G0970 Trochodendron aralioides HOM05D005792 ORTHO05D007171 1.0e-40 171.4 108 72.2
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 1.0e-37 161.4 277 34.3
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 2.0e-36 157.1 258 37.6
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 3.6e-30 136.3 282 31.9
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 1.5e-28 131.0 83 72.3
HPP92_014386 Vanilla planifolia HOM05D005792 ORTHO05D007171 2.4e-26 123.6 89 64.0
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 5.1e-24 115.9 134 47.8
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 7.1e-18 95.5 85 58.8
ATR0661G053 Amborella trichopoda HOM05D005792 ORTHO05D007171 2.1e-14 84.0 63 65.1
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 6.8e-13 79.0 77 54.5
COL.COLO4_12452 Corchorus olitorius HOM05D005792 ORTHO05D007171 6.4e-11 72.4 71 52.1
Sabra02G0010700 Salix brachista HOM05D000201 ORTHO05D000490 1.9e-10 70.9 59 55.9
SEGI_02138 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 2.1e-09 67.4 46 60.9
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 6.0e-09 65.9 55 52.7
Cpa.g.sc26.236 Carica papaya HOM05D005792 ORTHO05D007171 9.6e-07 58.5 36 77.8


User provided reference genes

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