Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.5e-127 459.5 231 100.0
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 2.1e-89 332.8 213 80.3
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 6.3e-86 321.2 220 74.5
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 2.4e-85 319.3 212 76.4
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 6.1e-81 304.7 229 68.6
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 3.0e-80 302.4 213 71.8
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 2.0e-79 299.7 188 80.3
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 4.4e-79 298.5 220 67.7
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 4.4e-79 298.5 212 70.3
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 7.5e-79 297.7 224 71.9
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 1.7e-78 296.6 208 73.6
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 6.3e-78 294.7 198 73.2
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 1.4e-77 293.5 228 67.5
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 2.4e-77 292.7 191 78.0
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 3.1e-77 292.4 215 67.9
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 5.4e-77 291.6 209 71.8
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 9.2e-77 290.8 220 67.3
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 9.2e-77 290.8 189 77.2
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.7e-76 289.3 187 75.4
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.5e-76 288.9 187 75.4
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 3.5e-76 288.9 221 66.1
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 5.9e-76 288.1 216 67.1
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 1.0e-75 287.3 188 74.5
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.3e-75 287.0 218 68.3
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 1.7e-75 286.6 213 66.2
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 2.3e-75 286.2 181 77.9
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 2.9e-75 285.8 202 73.8
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 3.8e-75 285.4 212 68.4
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 6.6e-75 284.6 217 70.0
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 1.1e-74 283.9 219 63.0
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 1.5e-74 283.5 181 77.3
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.9e-74 283.1 180 75.6
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 5.6e-74 281.6 179 76.5
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 7.3e-74 281.2 188 74.5
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 1.2e-73 280.4 183 75.4
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 1.2e-73 280.4 193 72.0
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 2.1e-73 279.6 193 72.5
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 2.1e-73 279.6 190 74.7
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 2.8e-73 279.3 176 80.1
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 2.8e-73 279.3 199 70.4
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 6.1e-73 278.1 215 64.7
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 8.0e-73 277.7 179 76.5
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 8.0e-73 277.7 199 70.4
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.4e-72 276.9 204 67.6
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.8e-72 276.6 187 72.7
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 3.0e-72 275.8 207 70.5
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 4.0e-72 275.4 199 71.9
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 5.2e-72 275.0 184 75.0
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 5.2e-72 275.0 199 72.4
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 6.8e-72 274.6 190 73.2
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 1.5e-71 273.5 216 67.6
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 2.6e-71 272.7 203 70.0
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 2.6e-71 272.7 207 65.7
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 3.4e-71 272.3 200 68.0
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 3.4e-71 272.3 189 73.0
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 5.8e-71 271.6 187 72.7
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.7e-70 270.0 189 72.5
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 1.7e-70 270.0 180 73.9
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 2.2e-70 269.6 184 73.9
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 3.7e-70 268.9 190 69.5
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 3.7e-70 268.9 187 73.3
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 6.4e-70 268.1 199 67.8
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 8.3e-70 267.7 199 66.3
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 1.1e-69 267.3 180 73.3
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 1.1e-69 267.3 204 67.2
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 1.4e-69 266.9 202 67.3
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 1.9e-69 266.5 199 66.3
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 3.2e-69 265.8 199 66.8
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 7.0e-69 264.6 201 66.2
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 1.6e-68 263.5 199 65.8
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 1.6e-68 263.5 199 67.3
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 1.6e-68 263.5 219 61.6
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 2.0e-68 263.1 197 67.5
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 6.0e-68 261.5 244 61.5
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 6.0e-68 261.5 188 70.2
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 6.0e-68 261.5 203 68.5
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 7.8e-68 261.2 244 61.5
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 7.8e-68 261.2 184 69.6
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 1.0e-67 260.8 191 73.3
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 1.0e-67 260.8 265 57.0
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 2.3e-67 259.6 219 65.3
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 7.3e-66 254.6 177 75.7
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 6.2e-65 251.5 209 61.7
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 8.3e-62 241.1 177 69.5
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 9.2e-61 237.7 177 68.4
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 4.6e-60 235.3 184 64.7
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 3.9e-59 232.3 276 49.3
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 3.4e-55 219.2 196 59.7
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 1.4e-53 213.8 132 76.5
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 2.4e-53 213.0 123 87.0
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 7.1e-53 211.5 181 65.2
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 3.5e-52 209.1 143 76.2
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 3.3e-50 202.6 152 67.1
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.3e-50 202.6 141 75.9
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 1.6e-49 200.3 217 54.4
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 3.6e-49 199.1 138 72.5
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.4e-48 197.2 116 84.5
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 1.8e-48 196.8 159 62.9
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 6.8e-48 194.9 133 74.4
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.4e-47 192.6 141 74.5
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 1.4e-45 187.2 124 74.2
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.0e-43 181.0 106 84.0
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 2.3e-43 179.9 145 66.2
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 4.7e-41 172.2 155 56.1
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 9.0e-40 167.9 218 45.9
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 1.2e-39 167.5 109 78.9
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.3e-35 154.1 158 49.4
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 1.3e-33 147.5 125 62.4
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.4e-32 143.3 98 74.5
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 3.9e-27 125.9 152 46.7
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 1.9e-26 123.6 73 79.5
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 1.3e-25 120.9 96 64.6
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 4.9e-22 109.0 133 44.4
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 9.6e-18 94.7 189 34.9
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 2.0e-15 87.0 49 77.6
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 4.5e-15 85.9 58 70.7
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 1.9e-10 70.5 41 73.2
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 2.8e-09 66.6 48 62.5
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 8.2e-09 65.1 89 43.8
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 5.3e-08 62.4 39 66.7
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 6.9e-08 62.0 104 41.3
SEGI_24864 Sequoiadendron giganteum HOM05D006638 ORTHO05D008246 1.3e-06 57.8 49 53.1


User provided reference genes

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