Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0207200 Rhododendron simsii HOM05D000152 ORTHO05D340197 1.6e-91 339.3 169 100.0
Rhsim05G0207100 Rhododendron simsii HOM05D000152 ORTHO05D001046 1.6e-22 110.2 80 70.0
CSS0011603 Camellia sinensis var. sinensis HOM05D000152 ORTHO05D001046 6.6e-16 88.2 82 56.1
CSS0025839 Camellia sinensis var. sinensis HOM05D000152 ORTHO05D001046 6.6e-16 88.2 82 56.1
Actinidia13772 Actinidia chinensis HOM05D000152 ORTHO05D001046 2.3e-13 79.7 82 54.9
vmacro22552 Vaccinium macrocarpon HOM05D000152 ORTHO05D001046 7.5e-12 74.7 82 51.2
Rhsim05G0207000 Rhododendron simsii HOM05D000152 ORTHO05D001046 3.7e-11 72.4 82 48.8
CSS0011075 Camellia sinensis var. sinensis HOM05D000152 ORTHO05D001046 4.1e-10 68.9 148 35.8
CSS0011801 Camellia sinensis var. sinensis HOM05D000152 ORTHO05D001046 4.1e-10 68.9 148 35.8
Rhsim06G0181000 Rhododendron simsii HOM05D000152 ORTHO05D001046 1.6e-09 67.0 80 46.2
Rhsim13G0183300 Rhododendron simsii HOM05D000152 ORTHO05D026097 2.7e-09 66.2 130 32.3
Dinv41266 Davidia involucrata HOM05D000152 ORTHO05D001046 2.3e-08 63.2 84 41.7
Solyc10g008830.2 Solanum lycopersicum HOM05D000152 ORTHO05D001046 1.1e-07 60.8 82 36.6
Sopen10g004620 Solanum pennellii HOM05D000152 ORTHO05D001046 1.1e-07 60.8 82 36.6
PGSC0003DMG400022820 Solanum tuberosum HOM05D000152 ORTHO05D001046 3.3e-07 59.3 82 35.4
CAN.G361.11 Capsicum annuum HOM05D000152 ORTHO05D001046 4.3e-07 58.9 82 34.1
Dinv40627 Davidia involucrata HOM05D000152 ORTHO05D001046 4.3e-07 58.9 82 35.4
Rhsim13G0183000 Rhododendron simsii HOM05D000152 ORTHO05D026097 4.3e-07 58.9 82 36.6
CSS0013688 Camellia sinensis var. sinensis HOM05D000152 ORTHO05D001046 7.3e-07 58.2 82 34.1
Nitab4.5_0002114g0040 Nicotiana tabacum HOM05D000152 ORTHO05D001046 9.5e-07 57.8 82 32.9
Nitab4.5_0008770g0010 Nicotiana tabacum HOM05D000152 ORTHO05D001046 1.2e-06 57.4 82 34.1
Psat1g200800 Pisum sativum HOM05D000152 ORTHO05D001046 1.2e-06 57.4 142 30.3
Peaxi162Scf00269g00121 Petunia axillaris HOM05D000152 ORTHO05D001046 1.6e-06 57.0 82 36.6
Lj1A1198G24 Lonicera japonica HOM05D000152 ORTHO05D001046 2.1e-06 56.6 82 36.6
QL01p014106 Quercus lobata HOM05D000152 ORTHO05D001212 2.1e-06 56.6 82 37.8
CiPaw.10G054700 Carya illinoinensis HOM05D000152 ORTHO05D001046 2.8e-06 56.2 144 31.2
Medtr2g015080 Medicago truncatula HOM05D000152 ORTHO05D001046 2.8e-06 56.2 143 28.0
Nitab4.5_0008770g0020 Nicotiana tabacum HOM05D000152 ORTHO05D001046 2.8e-06 56.2 82 31.7
Solyc02g077340.1 Solanum lycopersicum HOM05D000152 ORTHO05D001046 2.8e-06 56.2 82 34.1
CiPaw.10G054800 Carya illinoinensis HOM05D000152 ORTHO05D001046 6.2e-06 55.1 144 29.9
Migut.M01082 Erythranthe guttata HOM05D000152 ORTHO05D001046 6.2e-06 55.1 85 35.3
Sabra11G0042300 Salix brachista HOM05D000152 ORTHO05D001046 6.2e-06 55.1 80 33.8


User provided reference genes

Program Settings