Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 6.1e-205 717.2 358 100.0
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 4.7e-173 611.3 351 85.2
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 4.0e-172 608.2 351 86.0
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 1.7e-167 592.8 351 82.3
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 3.9e-167 591.7 351 82.1
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 2.5e-166 589.0 351 78.9
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 3.3e-166 588.6 354 82.5
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 2.1e-165 585.9 351 82.1
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 8.1e-165 583.9 352 81.2
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 3.1e-164 582.0 354 80.5
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 9.0e-164 580.5 351 80.9
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 9.0e-164 580.5 347 81.0
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 1.5e-163 579.7 351 80.1
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 1.5e-163 579.7 351 80.6
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 4.5e-163 578.2 350 80.6
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 4.5e-163 578.2 351 81.5
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 9.9e-163 577.0 352 80.4
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 1.3e-162 576.6 349 78.5
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 1.3e-162 576.6 347 81.3
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 2.2e-162 575.9 352 80.1
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 2.9e-162 575.5 351 77.5
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 2.9e-162 575.5 357 78.7
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 4.9e-162 574.7 351 81.2
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 8.4e-162 573.9 351 77.2
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.4e-161 572.4 354 79.9
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.2e-161 572.0 351 77.8
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 7.1e-161 570.9 354 79.9
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 9.3e-161 570.5 351 79.5
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 2.1e-160 569.3 352 76.4
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 2.7e-160 568.9 351 79.8
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 2.7e-160 568.9 352 75.6
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 2.3e-159 565.8 354 78.8
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 2.3e-159 565.8 352 77.8
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 3.0e-159 565.5 354 79.1
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 3.0e-159 565.5 355 77.5
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 3.9e-159 565.1 354 79.1
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 1.9e-158 562.8 351 78.3
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 1.9e-158 562.8 352 79.0
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 5.6e-158 561.2 351 77.5
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 9.6e-158 560.5 354 78.5
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 1.3e-157 560.1 351 77.8
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 1.6e-157 559.7 352 77.8
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 2.8e-157 558.9 352 77.8
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 4.8e-157 558.1 351 74.9
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 4.8e-157 558.1 355 75.8
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 1.4e-156 556.6 351 77.2
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 4.0e-156 555.1 351 75.5
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 6.9e-156 554.3 352 75.9
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 1.5e-155 553.1 351 76.6
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 2.0e-155 552.7 351 76.6
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 3.4e-155 552.0 351 75.5
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 5.8e-155 551.2 351 76.9
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 7.6e-155 550.8 354 76.8
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 2.9e-154 548.9 353 74.8
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 4.9e-154 548.1 351 76.4
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 8.4e-154 547.4 351 76.1
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 4.2e-153 545.0 343 77.6
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 5.5e-153 544.7 354 78.8
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 4.6e-152 541.6 376 72.1
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 3.0e-151 538.9 355 71.5
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 8.7e-151 537.3 353 75.4
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 1.3e-149 533.5 329 78.7
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 1.3e-149 533.5 345 75.7
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 2.8e-149 532.3 355 71.3
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 1.1e-148 530.4 348 73.9
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 3.4e-147 525.4 353 74.2
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 1.3e-146 523.5 356 76.4
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 4.9e-146 521.5 348 71.8
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 6.5e-146 521.2 330 75.8
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 1.1e-145 520.4 342 69.6
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 3.2e-145 518.8 342 69.3
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 3.2e-145 518.8 342 69.3
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 4.2e-145 518.5 341 70.4
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 1.6e-144 516.5 342 71.6
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 1.0e-143 513.8 342 71.9
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.0e-143 513.8 342 68.7
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 1.3e-143 513.5 342 69.0
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 3.0e-143 512.3 343 69.4
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 5.1e-143 511.5 322 79.5
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 6.7e-143 511.1 342 78.4
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 1.1e-142 510.4 342 70.8
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 7.4e-142 507.7 342 69.3
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 9.0e-140 500.7 342 68.1
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 1.5e-139 500.0 348 67.8
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 7.6e-139 497.7 326 76.7
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 5.5e-137 491.5 342 67.0
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 1.3e-135 486.9 335 76.1
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 4.8e-133 478.4 304 79.3
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 4.1e-132 475.3 347 67.7
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 2.0e-131 473.0 350 68.6
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 7.7e-131 471.1 383 62.1
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 1.4e-129 466.8 326 67.2
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 1.9e-129 466.5 332 64.8
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 3.2e-129 465.7 350 64.6
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 2.7e-128 462.6 346 67.3
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 1.1e-126 457.2 346 65.3
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 3.7e-125 452.2 329 69.0
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 2.6e-123 446.0 336 64.0
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 1.3e-122 443.7 351 69.5
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 8.2e-117 424.5 264 79.5
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.0e-115 419.9 351 62.4
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 4.7e-96 355.5 350 53.4
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 6.1e-96 355.1 324 53.7
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 1.1e-89 334.3 223 74.9
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 4.3e-89 332.4 334 52.4
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 1.2e-88 330.9 218 70.2
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 2.1e-88 330.1 322 57.1
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 2.6e-86 323.2 322 50.3
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 1.5e-78 297.4 315 49.2
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 8.9e-71 271.6 208 61.1
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 3.0e-58 229.9 135 76.3
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.1e-55 221.5 133 74.4
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 3.4e-54 216.5 128 78.1
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 6.0e-51 205.7 138 68.8
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 2.0e-46 190.7 223 45.7
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 1.8e-42 177.6 101 80.2
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 2.4e-31 140.6 82 84.1
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 2.2e-29 134.0 134 54.5
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 4.9e-29 132.9 79 75.9
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 1.0e-26 125.2 92 77.2
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 5.5e-20 102.8 63 73.0
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.6e-19 100.1 63 71.4
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 2.6e-14 84.0 52 67.3
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 3.0e-10 70.5 52 59.6
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 4.1e-07 60.1 57 56.1


User provided reference genes

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