Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0198700 Rhododendron simsii HOM05D000030 ORTHO05D030540 2.8e-100 368.6 184 100.0
Rhsim05G0198600 Rhododendron simsii HOM05D000030 ORTHO05D003768 3.6e-52 208.8 108 97.2
Rhsim02G0147200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.1e-37 160.6 93 88.2
Rhsim13G0145000 Rhododendron simsii HOM05D001778 ORTHO05D030540 1.9e-37 159.8 76 100.0
Rhsim04G0186500 Rhododendron simsii HOM05D000118 ORTHO05D000098 4.3e-37 158.7 77 98.7
Rhsim07G0141300 Rhododendron simsii HOM05D001778 ORTHO05D005872 9.0e-35 151.0 78 91.0
Rhsim10G0119100 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.6e-34 149.4 91 85.7
Rhsim09G0078900 Rhododendron simsii HOM05D000030 ORTHO05D000031 3.6e-23 112.5 95 66.3
RhsimUnG0100400 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.6e-23 112.5 85 72.9
Rhsim02G0034500 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.6e-23 112.1 85 71.8
Rhsim07G0239000 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.0e-22 110.9 86 70.9
Rhsim08G0083100 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.0e-22 110.9 85 69.4
Rhsim05G0082600 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.8e-22 110.2 86 70.9
Rhsim10G0102100 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.3e-22 109.8 88 71.6
Rhsim03G0100100 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.1e-22 108.6 85 70.6
Rhsim05G0198800 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.3e-21 105.9 183 45.4
Rhsim04G0141100 Rhododendron simsii HOM05D000030 ORTHO05D000031 7.4e-21 104.8 86 69.8
Rhsim12G0116200 Rhododendron simsii HOM05D000002 ORTHO05D000047 9.7e-21 104.4 80 72.5
Rhsim04G0130100 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.2e-20 103.2 88 68.2
Rhsim02G0100400 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.1e-19 100.9 86 65.1
RhsimUnG0150000 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.1e-15 86.7 95 50.5
Rhsim05G0209500 Rhododendron simsii HOM05D001778 ORTHO05D030540 2.3e-14 83.2 47 87.2
Actinidia30333 Actinidia chinensis HOM05D001778 ORTHO05D005872 3.9e-14 82.4 80 51.2
Rhsim01G0161000 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.1e-13 80.9 76 64.5
CSS0047621 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D005872 4.4e-13 79.0 79 49.4
Dinv09422 Davidia involucrata HOM05D001778 ORTHO05D005872 5.7e-13 78.6 86 48.8
Rhsim09G0124200 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.4e-13 78.2 90 50.0
CSS0021828 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D005872 9.7e-13 77.8 86 47.7
Dinv37445 Davidia involucrata HOM05D001778 ORTHO05D005872 1.3e-12 77.4 83 51.8
Rhsim05G0158300 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.1e-11 74.3 90 47.8
vmacro00111 Vaccinium macrocarpon HOM05D001778 ORTHO05D005872 3.1e-11 72.8 79 44.3
Lj8C369T4 Lonicera japonica HOM05D001778 ORTHO05D005872 5.3e-11 72.0 80 43.8
GSVIVG01036912001 Vitis vinifera HOM05D001778 ORTHO05D005872 2.6e-10 69.7 90 42.2
Rhsim12G0091200 Rhododendron simsii HOM05D000030 ORTHO05D339809 2.2e-09 66.6 64 59.4
Rhsim03G0092700 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.8e-09 65.9 50 72.0
Sabra01G0098000 Salix brachista HOM05D001778 ORTHO05D005872 3.8e-09 65.9 78 43.6
Potri.001G127100 Populus trichocarpa HOM05D001778 ORTHO05D005872 5.0e-09 65.5 78 42.3
CiPaw.11G077400 Carya illinoinensis HOM05D001778 ORTHO05D005872 6.5e-09 65.1 69 46.4
Sabra03G0073400 Salix brachista HOM05D001778 ORTHO05D005872 1.5e-08 63.9 78 42.3
Hma1.2p1_0262F.1_g105213 Hydrangea macrophylla HOM05D001778 ORTHO05D005872 1.9e-08 63.5 84 45.2
Cfa012632 Carpinus fangiana HOM05D001778 ORTHO05D005872 7.2e-08 61.6 86 39.5
Hma1.2p1_1969F.1_g309500 Hydrangea macrophylla HOM05D001778 ORTHO05D005872 7.2e-08 61.6 88 43.2
Rhsim03G0071200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.2e-07 60.8 57 56.1
Rhsim12G0047200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.2e-07 60.8 57 56.1
Rhsim05G0072700 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.7e-07 58.9 40 70.0
Rhsim09G0081600 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.7e-07 58.9 40 70.0
TAR629G1808 Trochodendron aralioides HOM05D001778 ORTHO05D005872 4.7e-07 58.9 86 40.7
Potri.003G106600 Populus trichocarpa HOM05D001778 ORTHO05D005872 6.1e-07 58.5 78 41.0
Nn3g19165 Nelumbo nucifera HOM05D001778 ORTHO05D005872 1.0e-06 57.8 90 38.9
Prupe.5G015800 Prunus persica HOM05D001778 ORTHO05D005872 1.8e-06 57.0 91 37.4
Rhsim02G0095800 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.8e-06 57.0 59 55.9
Manes.17G002200 Manihot esculenta HOM05D001778 ORTHO05D005872 2.3e-06 56.6 81 39.5
Haze_08034 Corylus avellana HOM05D001778 ORTHO05D005872 3.0e-06 56.2 86 37.2
RcHm_v2.0_Chr7g0214911 Rosa chinensis HOM05D001778 ORTHO05D005872 3.0e-06 56.2 91 34.1
Actinidia01233 Actinidia chinensis HOM05D001778 ORTHO05D005872 5.2e-06 55.5 84 42.9


User provided reference genes

Program Settings