Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.0e-157 560.1 289 100.0
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.9e-112 409.1 292 73.3
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 9.0e-98 360.9 292 65.4
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.6e-97 359.4 294 66.7
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.0e-80 302.0 304 56.9
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.4e-71 273.9 257 61.1
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 4.8e-67 258.8 285 52.3
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 3.8e-64 249.2 231 59.7
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 9.4e-63 244.6 269 52.8
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 1.0e-61 241.1 294 49.3
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.0e-60 236.9 282 47.9
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 7.0e-58 228.4 233 53.6
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.0e-57 226.9 233 53.6
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.0e-57 226.9 233 53.6
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.9e-55 220.3 209 60.8
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.9e-55 220.3 209 60.8
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 6.1e-54 215.3 235 51.5
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.4e-52 209.5 227 51.5
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.7e-51 207.2 212 51.9
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.1e-50 202.6 227 49.8
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 1.2e-49 201.1 169 63.3
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 1.0e-48 198.0 176 56.2
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 5.5e-47 192.2 284 41.5
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 9.5e-47 191.4 284 41.5
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 6.1e-46 188.7 285 41.1
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 6.1e-46 188.7 171 56.7
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 2.8e-43 179.9 333 36.6
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 6.3e-43 178.7 297 39.1
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 3.2e-42 176.4 227 43.2
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 3.2e-42 176.4 227 43.2
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 5.4e-42 175.6 227 42.3
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.4e-42 175.6 282 35.5
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 5.4e-42 175.6 252 44.0
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 5.0e-40 169.1 228 42.1
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 8.6e-40 168.3 228 42.1
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 1.9e-39 167.2 130 66.9
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 1.2e-38 164.5 227 41.0
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 3.6e-38 162.9 282 34.0
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 4.7e-38 162.5 227 39.6
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 8.0e-38 161.8 227 39.6
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 8.0e-38 161.8 227 39.6
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 8.0e-38 161.8 227 39.6
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 8.0e-38 161.8 214 43.5
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.0e-38 161.8 210 42.4
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 8.0e-38 161.8 129 65.1
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 1.0e-37 161.4 228 40.8
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 1.4e-37 161.0 263 36.5
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.3e-37 160.2 272 38.2
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.3e-37 160.2 169 47.3
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 8.9e-37 158.3 258 40.3
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 1.5e-36 157.5 227 39.6
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.0e-36 157.1 237 36.7
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.0e-36 157.1 223 39.9
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 2.6e-36 156.8 227 39.2
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.5e-36 155.2 175 45.7
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 7.5e-36 155.2 223 39.0
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 9.8e-36 154.8 227 39.2
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.8e-36 154.8 166 48.2
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.8e-36 154.8 166 48.2
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-35 154.5 223 39.5
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-35 154.5 228 40.4
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-35 154.5 228 40.4
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.9e-35 153.3 223 38.6
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 1.4e-34 151.0 218 38.5
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 4.1e-34 149.4 229 40.2
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.0e-34 148.7 223 38.6
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.0e-33 147.1 215 39.5
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.7e-33 146.7 239 39.3
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 1.0e-32 144.8 223 37.7
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 1.0e-32 144.8 167 46.7
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.0e-32 143.3 229 37.6
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 8.6e-32 141.7 234 36.3
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.1e-31 141.4 227 37.0
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.1e-31 141.4 228 36.4
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-31 141.4 218 35.8
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.5e-31 140.2 133 50.4
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 7.3e-31 138.7 278 36.0
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-30 137.5 223 36.8
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 2.1e-30 137.1 195 45.1
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.7e-30 136.0 239 35.1
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 2.3e-29 133.7 204 41.2
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 5.2e-29 132.5 295 35.6
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-28 131.3 179 40.2
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 7.5e-28 128.6 294 32.7
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 9.8e-28 128.3 227 35.2
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 4.9e-27 125.9 223 36.3
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 3.2e-26 123.2 189 41.3
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.6e-25 120.9 226 34.1
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 3.5e-25 119.8 228 34.6
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.5e-25 119.8 126 45.2
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 1.0e-24 118.2 164 40.9
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.1e-24 115.9 209 33.5
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 1.1e-23 114.8 179 41.3
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.5e-23 113.6 114 48.2
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 7.3e-23 112.1 237 31.6
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 9.5e-23 111.7 145 43.4
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 9.5e-23 111.7 145 43.4
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 1.6e-22 110.9 237 32.1
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 3.6e-22 109.8 232 33.6
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 8.1e-22 108.6 176 39.2
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-21 108.2 219 32.0
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-21 108.2 162 37.0
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-20 104.4 222 31.5
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-20 104.4 176 36.9
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.4e-20 103.2 227 33.0
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.9e-19 99.4 173 34.7
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 1.9e-18 97.4 214 31.8
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 7.1e-18 95.5 171 35.7
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-17 94.7 167 35.3
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-17 94.4 186 34.9
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 3.5e-17 93.2 231 30.3
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 4.6e-17 92.8 150 38.7
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 1.0e-16 91.7 148 38.5
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 3.0e-16 90.1 223 30.0
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 3.0e-16 90.1 156 37.2
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 3.9e-16 89.7 166 32.5
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 6.6e-16 89.0 143 40.6
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 8.6e-16 88.6 129 38.0
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 5.6e-15 85.9 153 37.3
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 7.3e-15 85.5 152 32.9
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 4.7e-14 82.8 101 48.5
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-13 81.6 118 39.0
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 1.4e-13 81.3 165 34.5
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 1.8e-13 80.9 149 35.6
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 3.1e-13 80.1 93 48.4
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 8.9e-13 78.6 100 45.0
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.9e-10 70.9 141 33.3
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 7.1e-10 68.9 113 34.5
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 1.0e-08 65.1 103 37.9
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 2.5e-07 60.5 94 35.1
Dinv03816 Davidia involucrata HOM05D031496 ORTHO05D029219 3.3e-07 60.1 62 46.8
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 1.3e-06 58.2 84 40.5
TPR.G33490 Trifolium pratense HOM05D005276 ORTHO05D006813 1.3e-06 58.2 72 44.4
Psat1g051400 Pisum sativum HOM05D005276 ORTHO05D006813 1.6e-06 57.8 71 43.7


User provided reference genes

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