Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 3.4e-167 591.7 312 100.0
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 3.9e-123 445.3 291 85.9
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 3.7e-105 385.6 301 73.1
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 3.3e-98 362.5 299 69.6
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 3.2e-93 345.9 295 69.5
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 8.8e-91 337.8 294 63.9
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 9.8e-90 334.3 294 66.0
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 2.4e-88 329.7 303 62.4
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 1.2e-87 327.4 298 64.1
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 4.5e-87 325.5 295 64.1
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 4.5e-87 325.5 303 62.0
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 1.7e-86 323.6 303 62.0
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 3.8e-86 322.4 294 63.9
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 1.1e-85 320.9 294 62.2
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 4.2e-85 318.9 299 64.5
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 5.5e-85 318.5 297 62.6
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 7.2e-85 318.2 299 64.2
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 7.2e-85 318.2 297 65.3
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 4.7e-84 315.5 299 63.5
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 4.0e-83 312.4 302 63.2
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 1.2e-82 310.8 300 60.7
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 5.7e-82 308.5 310 58.1
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 1.3e-81 307.4 298 60.7
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 1.7e-81 307.0 300 61.7
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 4.9e-81 305.4 306 59.2
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 1.8e-80 303.5 299 57.9
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 5.4e-80 302.0 294 59.2
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 7.0e-80 301.6 292 61.6
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 9.2e-80 301.2 303 59.7
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 2.0e-79 300.1 294 59.5
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 7.8e-79 298.1 297 59.3
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 1.0e-78 297.7 312 55.8
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 1.3e-78 297.4 300 60.0
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.7e-78 297.0 331 54.4
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 3.8e-78 295.8 331 54.4
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 6.6e-78 295.0 293 57.7
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 5.6e-77 292.0 299 55.9
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 7.3e-77 291.6 294 56.8
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 7.3e-77 291.6 308 54.2
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 2.1e-76 290.0 297 56.6
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 3.6e-76 289.3 295 62.7
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 1.8e-75 287.0 293 62.5
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 5.2e-75 285.4 289 56.4
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 1.2e-74 284.3 300 56.7
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 1.5e-74 283.9 321 53.6
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 2.0e-74 283.5 291 57.0
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 2.0e-74 283.5 298 56.0
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 4.4e-74 282.3 306 58.2
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 5.7e-74 282.0 305 55.7
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 5.7e-74 282.0 321 53.6
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 1.3e-73 280.8 287 55.1
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 1.7e-73 280.4 305 55.4
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 2.9e-73 279.6 294 56.1
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 3.7e-73 279.3 286 57.0
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 6.4e-73 278.5 302 58.6
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.1e-72 277.7 296 55.4
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.8e-72 276.9 294 56.5
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 4.1e-72 275.8 297 56.6
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 5.4e-72 275.4 294 56.1
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 7.0e-72 275.0 286 58.0
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 7.0e-72 275.0 286 58.0
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 1.6e-71 273.9 259 59.5
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 1.6e-71 273.9 297 56.6
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.9e-71 271.9 293 54.6
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.9e-69 266.9 302 54.6
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 2.5e-69 266.5 295 57.3
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 7.3e-69 265.0 296 54.1
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 2.1e-68 263.5 289 57.4
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 1.4e-67 260.8 295 53.9
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 2.3e-67 260.0 294 53.7
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 2.3e-67 260.0 303 51.5
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 4.0e-67 259.2 304 52.3
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 2.0e-66 256.9 311 52.1
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 5.8e-66 255.4 301 51.2
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 9.8e-66 254.6 287 51.6
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.7e-65 253.8 300 51.3
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 2.2e-65 253.4 295 54.2
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 2.4e-64 250.0 300 52.3
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 3.2e-64 249.6 313 49.5
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 2.7e-63 246.5 285 50.9
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 3.0e-62 243.0 284 55.6
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 5.0e-62 242.3 345 46.1
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 8.6e-62 241.5 339 46.9
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 1.2e-60 237.7 309 48.5
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 8.1e-60 235.0 345 45.5
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 1.1e-59 234.6 130 86.9
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 9.8e-58 228.0 258 56.6
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 3.7e-57 226.1 387 41.1
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 2.3e-54 216.9 212 60.4
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 1.6e-52 210.7 292 53.1
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 2.4e-48 196.8 290 44.1
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.7e-46 190.7 139 70.5
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 1.7e-46 190.7 283 43.8
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.3e-46 190.3 98 88.8
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 1.5e-45 187.6 98 89.8
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.5e-45 186.8 98 90.8
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 4.7e-44 182.6 99 86.9
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 1.8e-43 180.6 98 84.7
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 9.9e-42 174.9 122 68.9
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 2.4e-40 170.2 140 59.3
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 3.3e-37 159.8 103 72.8
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 1.3e-36 157.9 127 73.2
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 2.1e-36 157.1 98 78.6
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 6.2e-36 155.6 214 51.9
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 1.8e-35 154.1 79 88.6
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 4.5e-34 149.4 134 54.5
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 5.8e-34 149.1 217 47.9
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 1.2e-31 141.4 248 42.7
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.5e-26 124.4 199 45.7
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.8e-22 110.9 216 40.7
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.8e-20 103.6 196 42.9
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 4.2e-16 89.7 196 39.3
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 2.5e-13 80.5 81 56.8
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 3.3e-13 80.1 81 56.8
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 3.3e-13 80.1 81 56.8
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 3.3e-13 80.1 81 56.8
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 3.3e-13 80.1 82 53.7
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 9.7e-13 78.6 41 87.8
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.3e-12 78.2 205 34.6
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 5.9e-10 69.3 114 45.6
CDE02G2228 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 1.7e-09 67.8 113 39.8
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 6.5e-09 65.9 44 68.2
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 7.2e-08 62.4 115 43.5
Lsat_1_v5_gn_5_23780 Lactuca sativa HOM05D004869 ORTHO05D005893 3.9e-06 56.6 91 47.3


User provided reference genes

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