Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0186200 Rhododendron simsii HOM05D007616 ORTHO05D008751 3.2e-168 595.1 324 100.0
Actinidia06472 Actinidia chinensis HOM05D007616 ORTHO05D008751 2.3e-41 173.7 199 57.3
CSS0021835 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 4.3e-40 169.5 222 53.2
CSS0006253 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 7.4e-40 168.7 222 53.2
Oeu000131.1 Olea europaea HOM05D007616 ORTHO05D008751 3.4e-37 159.8 226 49.6
vmacro19869 Vaccinium macrocarpon HOM05D007616 ORTHO05D008751 2.9e-36 156.8 255 45.5
Sopen01g046110 Solanum pennellii HOM05D007616 ORTHO05D008751 4.6e-34 149.4 227 45.8
Solyc01g103700.3 Solanum lycopersicum HOM05D007616 ORTHO05D008751 1.3e-33 147.9 236 43.6
Potri.003G009400 Populus trichocarpa HOM05D007616 ORTHO05D008751 2.3e-33 147.1 237 43.5
DCAR_025356 Daucus carota HOM05D007616 ORTHO05D008751 5.1e-33 146.0 229 47.2
CiPaw.05G005800 Carya illinoinensis HOM05D007616 ORTHO05D008751 7.4e-32 142.1 232 45.7
COL.COLO4_17740 Corchorus olitorius HOM05D007616 ORTHO05D008751 1.3e-31 141.4 247 46.2
Nitab4.5_0000948g0040 Nicotiana tabacum HOM05D007616 ORTHO05D008751 1.3e-31 141.4 266 39.8
Potri.004G222800 Populus trichocarpa HOM05D007616 ORTHO05D008751 2.8e-31 140.2 251 42.2
Nitab4.5_0002596g0080 Nicotiana tabacum HOM05D007616 ORTHO05D008751 1.1e-30 138.3 259 41.7
Manes.07G023000 Manihot esculenta HOM05D007616 ORTHO05D008751 1.4e-30 137.9 242 44.2
PGSC0003DMG400024897 Solanum tuberosum HOM05D007616 ORTHO05D008751 1.4e-30 137.9 238 43.7
Peaxi162Scf00011g00934 Petunia axillaris HOM05D007616 ORTHO05D008751 3.1e-30 136.7 249 42.6
Glyma.12G167600 Glycine max HOM05D007616 ORTHO05D008751 5.3e-30 136.0 233 42.5
Manes.10G119800 Manihot esculenta HOM05D007616 ORTHO05D008751 5.3e-30 136.0 224 43.8
Eucgr.I02753 Eucalyptus grandis HOM05D007616 ORTHO05D008751 4.5e-29 132.9 229 43.2
Thecc.02G023400 Theobroma cacao HOM05D007616 ORTHO05D008751 4.5e-29 132.9 247 43.3
Duzib132G0975 Durio zibethinus HOM05D007616 ORTHO05D008751 7.6e-29 132.1 244 42.2
MSTRG.20315 Avicennia marina HOM05D007616 ORTHO05D008751 2.9e-28 130.2 223 46.2
Lsat_1_v5_gn_9_120740 Lactuca sativa HOM05D007616 ORTHO05D008751 5.0e-28 129.4 244 40.6
FvH4_6g51930 Fragaria vesca HOM05D007616 ORTHO05D008751 8.4e-28 128.6 236 42.4
FAN09G2205 Fragaria x ananassa HOM05D007616 ORTHO05D008751 8.4e-28 128.6 239 42.3
FAN14G2995 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.1e-27 128.3 236 42.4
Atru.chr4.2705 Acer truncatum HOM05D007616 ORTHO05D008751 1.4e-27 127.9 228 42.5
Psat1g223480 Pisum sativum HOM05D007616 ORTHO05D008751 1.4e-27 127.9 253 40.3
Sabra01G0168700 Salix brachista HOM05D007616 ORTHO05D008751 1.9e-27 127.5 237 44.3
Cc02_g23010 Coffea canephora HOM05D007616 ORTHO05D008751 2.5e-27 127.1 246 42.7
Oeu058636.1 Olea europaea HOM05D007616 ORTHO05D008751 2.5e-27 127.1 215 47.4
QL02p100178 Quercus lobata HOM05D007616 ORTHO05D008751 2.5e-27 127.1 271 39.1
ClCG11G013320 Citrullus lanatus HOM05D007616 ORTHO05D008751 3.2e-27 126.7 236 46.6
Phvul.006G218400 Phaseolus vulgaris HOM05D007616 ORTHO05D008751 3.2e-27 126.7 217 42.9
CANSAT54G0672 Cannabis sativa HOM05D007616 ORTHO05D008751 4.2e-27 126.3 223 43.9
Gohir.A01G182700 Gossypium hirsutum HOM05D007616 ORTHO05D008751 7.1e-27 125.6 243 43.2
Prupe.1G577200 Prunus persica HOM05D007616 ORTHO05D008751 1.2e-26 124.8 259 41.7
MD08G1240500 Malus domestica HOM05D007616 ORTHO05D008751 1.6e-26 124.4 248 39.1
CiPaw.06G173100 Carya illinoinensis HOM05D007616 ORTHO05D008751 2.1e-26 124.0 212 45.8
Sed0008181 Sechium edule HOM05D007616 ORTHO05D008751 2.1e-26 124.0 221 45.2
Gohir.D01G173800 Gossypium hirsutum HOM05D007616 ORTHO05D008751 2.7e-26 123.6 242 42.1
Gorai.002G215900 Gossypium raimondii HOM05D007616 ORTHO05D008751 2.7e-26 123.6 242 42.1
MELO3C011824.2 Cucumis melo HOM05D007616 ORTHO05D008751 6.1e-26 122.5 195 45.1
RcHm_v2.0_Chr2g0173411 Rosa chinensis HOM05D007616 ORTHO05D008751 7.9e-26 122.1 256 42.2
arahy.Tifrunner.gnm1.ann1.4HSG2Y Arachis hypogaea HOM05D007616 ORTHO05D008751 1.0e-25 121.7 243 42.0
arahy.Tifrunner.gnm1.ann1.D7HVAZ Arachis hypogaea HOM05D007616 ORTHO05D008751 1.0e-25 121.7 238 42.4
Rhsim05G0130500 Rhododendron simsii HOM05D007616 ORTHO05D008751 1.3e-25 121.3 87 81.6
Migut.B00786 Erythranthe guttata HOM05D007616 ORTHO05D008751 2.3e-25 120.6 243 42.8
Lalb_Chr18g0061041 Lupinus albus HOM05D007616 ORTHO05D008751 5.1e-25 119.4 248 39.5
Sabra03G0004800 Salix brachista HOM05D007616 ORTHO05D008751 8.7e-25 118.6 223 43.0
Duzib248G0210 Durio zibethinus HOM05D007616 ORTHO05D008751 4.3e-24 116.3 224 42.9
CAN.G798.53 Capsicum annuum HOM05D007616 ORTHO05D008751 1.3e-23 114.8 249 37.3
Medtr2g005910 Medicago truncatula HOM05D007616 ORTHO05D008751 1.6e-23 114.4 189 44.4
VMungo0540G1916 Vigna mungo HOM05D007616 ORTHO05D008751 6.3e-23 112.5 223 38.6
TPR.G2142 Trifolium pratense HOM05D007616 ORTHO05D008751 3.1e-22 110.2 237 39.7
Nn5g27765 Nelumbo nucifera HOM05D007616 ORTHO05D008751 5.3e-22 109.4 210 41.9
HanXRQChr06g0181301 Helianthus annuus HOM05D007616 ORTHO05D008751 6.9e-22 109.0 234 40.6
Lj6g0028114 Lotus japonicus HOM05D007616 ORTHO05D008751 6.9e-22 109.0 285 37.2
MD15G1433700 Malus domestica HOM05D007616 ORTHO05D008751 2.6e-21 107.1 265 34.3
Ca_00046_v3 Cicer arietinum L. HOM05D001654 ORTHO05D002773 3.4e-21 106.7 277 36.5
THA.LOC104816807 Tarenaya hassleriana HOM05D007616 ORTHO05D008751 1.7e-20 104.4 277 37.2
PSO170G4229 Papaver somniferum HOM05D007616 ORTHO05D008751 1.1e-19 101.7 252 36.5
HPP92_005665 Vanilla planifolia HOM05D007616 ORTHO05D008751 1.4e-19 101.3 239 34.3
ECA236G1993 Erigeron canadensis HOM05D007616 ORTHO05D008751 2.5e-19 100.5 223 39.0
Aqoxy6G00124 Aquilegia oxysepala HOM05D007616 ORTHO05D008751 1.2e-18 98.2 232 40.1
PSO782G2099 Papaver somniferum HOM05D007616 ORTHO05D008751 1.6e-18 97.8 250 34.8
SGA_v2.0_scaffold272G46374 Striga asiatica HOM05D007616 ORTHO05D008751 1.6e-18 97.8 218 41.3
Sc20g0001190 Simmondsia chinensis HOM05D007616 ORTHO05D008751 7.9e-18 95.5 168 45.8
CsaV3_5G029830 Cucumis sativus L. HOM05D001654 ORTHO05D002773 1.8e-17 94.4 180 40.6
PGR142G0501 Punica granatum HOM05D007616 ORTHO05D008751 1.3e-15 88.2 170 38.8
BcaC02g10705 Brassica carinata HOM05D007616 ORTHO05D008751 1.7e-15 87.8 205 37.1
Potri.019G021000 Populus trichocarpa HOM05D007616 ORTHO05D008751 2.8e-15 87.0 225 35.1
AL2G17970 Arabidopsis lyrata HOM05D012662 ORTHO05D008751 6.3e-15 85.9 279 30.1
ATR0090G002 Amborella trichopoda HOM05D007616 ORTHO05D008751 1.4e-14 84.7 240 33.8
Hma1.2p1_1108F.1_g257940 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 1.4e-14 84.7 227 37.4
ECA240G3878 Erigeron canadensis HOM05D007616 ORTHO05D008751 5.3e-14 82.8 242 30.2
TWI14G0953 Tripterygium wilfordii HOM05D007616 ORTHO05D008751 2.0e-13 80.9 221 37.1
AUR62037671 Chenopodium quinoa HOM05D002239 ORTHO05D002408 1.7e-12 77.8 267 30.7
AUR62034500 Chenopodium quinoa HOM05D007616 ORTHO05D008751 2.2e-12 77.4 267 31.8
C01p35720 Brassica napus HOM05D007616 ORTHO05D008751 2.5e-11 73.9 165 38.8
BolC1t03530H Brassica oleracea HOM05D007616 ORTHO05D008751 2.5e-11 73.9 165 38.8
Cfa004508 Carpinus fangiana HOM05D007616 ORTHO05D008751 2.5e-11 73.9 221 37.6
Lsat_1_v5_gn_7_76421 Lactuca sativa HOM05D007616 ORTHO05D008751 4.2e-11 73.2 243 32.1
Hma1.2p1_0427F.1_g150730 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 5.5e-11 72.8 135 44.4
GSVIVG01023272001 Vitis vinifera HOM05D007616 ORTHO05D008751 1.2e-10 71.6 232 34.5
Nn1g08457 Nelumbo nucifera HOM05D007616 ORTHO05D008751 4.7e-10 69.7 231 34.2
C04p26930 Brassica napus HOM05D007616 ORTHO05D008751 1.0e-09 68.6 127 43.3
BolC4t24105H Brassica oleracea HOM05D007616 ORTHO05D008751 1.0e-09 68.6 127 43.3
Ah.06g187740 Amaranthus hybridus HOM05D007616 ORTHO05D008751 3.9e-09 66.6 127 43.3
Dinv07475 Davidia involucrata HOM05D001654 ORTHO05D002773 3.9e-09 66.6 98 46.9
A09p18580 Brassica napus HOM05D012662 ORTHO05D008751 2.0e-08 64.3 173 34.7
Haze_10065 Corylus avellana HOM05D001654 ORTHO05D002773 5.7e-08 62.8 258 31.8
Sopen03g006340 Solanum pennellii HOM05D002661 ORTHO05D002786 9.7e-08 62.0 215 28.8
Aqoxy4G02812 Aquilegia oxysepala HOM05D002661 ORTHO05D002786 2.2e-07 60.8 201 28.9
Dinv40084 Davidia involucrata HOM05D002661 ORTHO05D002786 2.8e-07 60.5 203 28.1
CiPaw.08G131700 Carya illinoinensis HOM05D002661 ORTHO05D002786 3.7e-07 60.1 206 27.7
Solyc03g033550.3 Solanum lycopersicum HOM05D002661 ORTHO05D002786 3.7e-07 60.1 215 28.8
PGSC0003DMG400022533 Solanum tuberosum HOM05D002661 ORTHO05D002786 6.3e-07 59.3 215 28.8
Os11g0195800 Oryza sativa ssp. japonica HOM05D007616 ORTHO05D008751 1.1e-06 58.5 293 26.6
Carub.0002s0656 Capsella rubella HOM05D012662 ORTHO05D008751 1.8e-06 57.8 249 29.3
Gohir.A05G257100 Gossypium hirsutum HOM05D002661 ORTHO05D002786 1.8e-06 57.8 202 29.2
vmacro04348 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 1.8e-06 57.8 196 28.6
Haze_22627 Corylus avellana HOM05D002661 ORTHO05D002786 2.4e-06 57.4 203 28.6
MSTRG.2712 Avicennia marina HOM05D002661 ORTHO05D002786 3.1e-06 57.0 209 29.7
FAN20G0494 Fragaria x ananassa HOM05D002661 ORTHO05D002786 3.1e-06 57.0 204 27.9
unitig_21.g20913 Utricularia gibba HOM05D007616 ORTHO05D008751 3.1e-06 57.0 221 28.1
FAN05G5322 Fragaria x ananassa HOM05D007616 ORTHO05D008751 4.1e-06 56.6 97 45.4
Gorai.009G270100 Gossypium raimondii HOM05D002661 ORTHO05D002786 4.1e-06 56.6 202 29.2
MBI05_g15357_MAGBIO Magnolia biondii HOM05D002661 ORTHO05D002786 5.3e-06 56.2 200 28.5
MD08G1013500 Malus domestica HOM05D002661 ORTHO05D002786 9.1e-06 55.5 208 28.4
Rhsim07G0246900 Rhododendron simsii HOM05D002661 ORTHO05D002786 9.1e-06 55.5 201 26.9


User provided reference genes

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