Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0179800 Rhododendron simsii HOM05D009309 ORTHO05D011491 2.6e-68 261.9 130 100.0
Dinv37295 Davidia involucrata HOM05D009309 ORTHO05D011491 1.2e-12 77.0 49 75.5
Potri.006G127000 Populus trichocarpa HOM05D009309 ORTHO05D011491 9.3e-10 67.4 47 66.0
Manes.08G008300 Manihot esculenta HOM05D009309 ORTHO05D011491 1.2e-09 67.0 46 71.7
CiPaw.09G174500 Carya illinoinensis HOM05D009309 ORTHO05D011491 2.1e-09 66.2 48 75.0
Lsat_1_v5_gn_2_106500 Lactuca sativa HOM05D007947 ORTHO05D010018 4.6e-09 65.1 49 69.4
HanXRQChr14g0454561 Helianthus annuus HOM05D009309 ORTHO05D011491 7.8e-09 64.3 49 67.3
Cfa017573 Carpinus fangiana HOM05D009309 ORTHO05D011491 3.9e-08 62.0 49 67.3
Ciclev10013303m.g Citrus clementina HOM05D009309 ORTHO05D011491 1.1e-07 60.5 47 66.0
MBI10_g22826_MAGBIO Magnolia biondii HOM05D009309 ORTHO05D011491 4.3e-07 58.5 48 60.4
MD12G1117300 Malus domestica HOM05D009309 ORTHO05D011491 4.3e-07 58.5 47 61.7
SGA_v2.0_scaffold75G24863 Striga asiatica HOM05D001565 ORTHO05D001725 4.3e-07 58.5 53 67.9
MD04G1096300 Malus domestica HOM05D009309 ORTHO05D011491 5.6e-07 58.2 54 53.7
Lj1g0009603 Lotus japonicus HOM05D009309 ORTHO05D011491 7.3e-07 57.8 47 63.8
Thecc.05G062000 Theobroma cacao HOM05D009309 ORTHO05D011491 7.3e-07 57.8 52 61.5
Migut.J00541 Erythranthe guttata HOM05D009309 ORTHO05D011491 1.6e-06 56.6 48 60.4
Nn2g11514 Nelumbo nucifera HOM05D009309 ORTHO05D011491 1.6e-06 56.6 45 62.2
Glyma.19G182200 Glycine max HOM05D009309 ORTHO05D011491 2.8e-06 55.8 47 63.8
Glyma.03G181500 Glycine max HOM05D009309 ORTHO05D011491 6.2e-06 54.7 47 61.7
Aqoxy1G01207 Aquilegia oxysepala HOM05D009309 ORTHO05D011491 8.1e-06 54.3 44 59.1


User provided reference genes

Program Settings