Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 2.8e-234 815.1 466 100.0
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 6.4e-162 574.7 486 71.6
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 8.7e-143 511.1 470 68.1
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 1.8e-127 460.3 414 61.4
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 3.9e-127 459.1 422 63.5
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 2.5e-126 456.4 415 63.9
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 1.6e-125 453.8 414 65.0
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 1.5e-123 447.2 418 61.2
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 2.0e-123 446.8 530 57.5
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 3.8e-122 442.6 428 60.5
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 5.0e-122 442.2 416 61.1
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 1.1e-121 441.0 423 59.3
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 4.2e-121 439.1 418 60.3
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 5.5e-121 438.7 419 59.4
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 1.2e-120 437.6 418 61.5
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 3.6e-120 436.0 415 59.8
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 3.6e-120 436.0 416 60.6
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 4.6e-120 435.6 418 59.6
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 3.0e-119 433.0 416 58.9
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 3.9e-119 432.6 420 60.0
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 5.1e-119 432.2 416 59.6
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 6.7e-119 431.8 420 59.3
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 1.5e-118 430.6 419 58.7
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 1.5e-118 430.6 416 59.4
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 2.0e-118 430.3 424 58.7
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 4.3e-118 429.1 418 58.9
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 7.4e-118 428.3 416 58.2
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 7.4e-118 428.3 416 58.4
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 1.3e-117 427.6 415 59.8
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 1.3e-117 427.6 415 59.0
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 2.2e-117 426.8 422 59.7
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 2.8e-117 426.4 417 59.2
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 6.3e-117 425.2 423 57.7
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 8.2e-117 424.9 418 57.9
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 8.2e-117 424.9 417 59.0
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 8.2e-117 424.9 418 58.6
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 1.1e-116 424.5 418 59.1
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 1.1e-116 424.5 414 58.5
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 1.8e-116 423.7 422 57.8
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 3.1e-116 422.9 422 59.5
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 7.7e-115 418.3 425 58.8
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 2.2e-114 416.8 413 57.4
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 3.8e-114 416.0 413 56.7
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 1.4e-113 414.1 417 57.8
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 9.4e-113 411.4 418 56.9
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 9.4e-113 411.4 414 56.5
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.1e-112 410.2 431 56.1
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 6.1e-112 408.7 418 57.2
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 1.4e-111 407.5 414 56.5
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 1.4e-111 407.5 400 57.0
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 1.8e-111 407.1 416 57.2
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 2.3e-111 406.8 435 55.4
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 3.0e-111 406.4 416 57.2
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 3.9e-111 406.0 419 57.0
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 3.9e-111 406.0 418 56.2
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 5.1e-111 405.6 430 55.6
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 1.1e-110 404.4 414 56.0
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 1.5e-110 404.1 416 56.0
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 2.6e-110 403.3 419 56.3
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 4.4e-110 402.5 430 55.3
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 5.7e-110 402.1 412 57.0
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 7.4e-110 401.7 416 56.2
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 9.7e-110 401.4 416 56.0
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 1.3e-109 401.0 404 55.7
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 2.8e-109 399.8 418 56.5
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 6.3e-109 398.7 395 58.0
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 8.2e-109 398.3 399 59.1
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 1.1e-108 397.9 414 55.8
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 1.2e-107 394.4 400 56.8
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 4.5e-107 392.5 415 54.7
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.9e-106 389.8 434 54.1
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 5.0e-106 389.0 416 57.0
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.5e-105 386.7 434 53.9
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 5.5e-105 385.6 434 53.9
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 7.2e-105 385.2 446 50.7
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 3.6e-104 382.9 418 54.5
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 4.7e-104 382.5 440 51.6
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 6.1e-104 382.1 411 56.2
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 1.0e-103 381.3 437 52.9
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 1.4e-103 380.9 443 51.0
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 1.8e-103 380.6 445 51.7
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 2.0e-102 377.1 407 53.8
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 3.3e-102 376.3 392 56.4
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 4.4e-102 375.9 444 51.1
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 7.5e-102 375.2 442 52.0
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 2.8e-101 373.2 440 50.5
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 2.8e-101 373.2 393 55.2
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 2.5e-97 360.1 365 59.2
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 3.2e-97 359.8 421 51.3
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 4.2e-97 359.4 418 51.9
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 5.5e-97 359.0 409 50.9
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 9.4e-97 358.2 447 49.2
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 3.6e-96 356.3 449 48.3
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 8.8e-95 351.7 377 53.3
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 1.2e-94 351.3 377 53.3
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 1.2e-94 351.3 437 49.2
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 1.7e-93 347.4 380 52.9
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 1.2e-91 341.3 415 52.8
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 1.0e-87 328.2 390 51.8
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 1.5e-81 307.8 397 45.6
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 4.4e-78 296.2 334 53.9
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 3.7e-77 293.1 375 48.8
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 9.2e-76 288.5 330 51.8
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 4.0e-71 273.1 396 42.7
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 2.0e-67 260.8 326 47.5
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 1.8e-63 247.7 391 41.2
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 4.4e-62 243.0 405 39.3
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 4.4e-62 243.0 324 47.2
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 2.9e-61 240.4 209 62.7
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.8e-55 221.1 311 45.3
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 2.1e-48 197.6 420 36.7
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 3.1e-47 193.7 124 79.0
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 1.3e-42 178.3 125 72.0
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 1.7e-37 161.4 151 57.6
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 3.3e-33 147.1 89 79.8
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 3.2e-20 104.0 436 25.7
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 9.6e-17 92.4 86 59.3
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 1.5e-14 85.1 70 72.9
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 1.9e-12 78.2 129 36.4
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 9.3e-12 75.9 61 59.0
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 1.2e-11 75.5 58 58.6
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 2.3e-10 71.2 44 68.2
SHI23188 Sapria himalayana HOM05D006391 ORTHO05D007767 2.2e-08 64.7 119 40.3
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 9.0e-07 59.3 130 28.5


User provided reference genes

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