Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 2.9e-241 838.2 440 100.0
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 3.9e-153 545.4 478 63.0
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 3.8e-148 528.9 342 80.7
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 3.7e-143 512.3 453 61.8
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 6.3e-143 511.5 438 63.2
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 1.1e-142 510.8 447 60.4
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 2.2e-140 503.1 455 59.6
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 8.5e-140 501.1 434 62.2
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 3.2e-139 499.2 434 61.5
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 5.5e-139 498.4 447 60.2
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 8.0e-138 494.6 451 61.2
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 3.0e-137 492.7 443 59.8
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 6.7e-137 491.5 439 63.1
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 1.1e-136 490.7 411 62.8
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 1.1e-136 490.7 453 59.4
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 4.4e-136 488.8 376 66.0
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 5.7e-136 488.4 447 60.0
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 9.7e-136 487.6 445 60.2
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 1.3e-135 487.3 376 66.0
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 1.7e-135 486.9 449 61.7
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 1.7e-135 486.9 446 60.1
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 8.2e-135 484.6 450 59.8
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 1.1e-134 484.2 460 59.3
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 1.8e-134 483.4 460 57.4
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 1.8e-134 483.4 412 62.4
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 4.1e-134 482.3 457 57.3
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 9.1e-134 481.1 454 59.5
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 2.0e-133 479.9 454 59.3
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 4.5e-133 478.8 451 58.5
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 2.9e-132 476.1 454 58.4
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 3.8e-132 475.7 454 57.5
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 5.0e-132 475.3 377 65.3
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 6.5e-132 474.9 451 57.9
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 8.5e-132 474.6 439 59.5
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 1.5e-131 473.8 453 59.2
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 3.2e-131 472.6 449 55.7
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 9.4e-131 471.1 376 65.2
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 1.6e-130 470.3 448 59.4
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 2.1e-130 469.9 448 59.4
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 5.7e-128 461.8 380 62.9
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 1.3e-127 460.7 455 55.4
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 2.2e-127 459.9 446 55.6
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 2.8e-127 459.5 427 57.6
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 5.3e-126 455.3 439 57.4
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 5.9e-125 451.8 379 60.7
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 3.2e-123 446.0 450 54.4
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 4.2e-123 445.7 450 54.4
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 5.5e-123 445.3 453 55.0
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 1.2e-122 444.1 456 55.3
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 6.1e-122 441.8 459 55.1
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 2.3e-121 439.9 467 52.7
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 1.5e-120 437.2 379 58.6
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 2.6e-120 436.4 448 55.6
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 5.7e-120 435.3 456 54.4
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 1.3e-119 434.1 444 55.0
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 1.3e-119 434.1 457 51.0
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 6.3e-119 431.8 377 60.7
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 1.1e-118 431.0 408 56.6
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 1.8e-118 430.3 460 53.5
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 4.1e-118 429.1 453 52.1
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 5.9e-117 425.2 376 59.3
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 8.6e-116 421.4 457 52.5
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 5.5e-115 418.7 331 65.6
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 9.8e-112 407.9 451 50.6
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 1.7e-111 407.1 451 50.6
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 1.7e-111 407.1 451 50.6
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 2.2e-111 406.8 451 50.6
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 2.8e-111 406.4 451 50.6
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 2.8e-111 406.4 380 58.4
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 1.1e-110 404.4 405 54.8
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 1.1e-110 404.4 347 59.9
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 1.8e-110 403.7 462 53.9
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 1.8e-110 403.7 460 52.2
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 1.8e-110 403.7 448 51.8
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 3.5e-109 399.4 449 49.9
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 7.8e-109 398.3 450 49.3
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 2.3e-108 396.7 453 49.7
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 1.1e-107 394.4 379 55.4
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.5e-107 394.0 454 52.6
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 4.3e-107 392.5 455 52.5
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 1.2e-106 391.0 444 49.1
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 2.1e-106 390.2 424 50.7
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 6.1e-106 388.7 451 49.0
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 1.0e-105 387.9 424 51.2
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 2.3e-105 386.7 465 48.8
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 3.1e-105 386.3 380 53.4
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 5.2e-105 385.6 410 51.2
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 1.2e-104 384.4 407 51.6
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 1.2e-104 384.4 380 53.4
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 1.5e-104 384.0 429 50.1
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 7.5e-104 381.7 429 49.0
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 9.8e-104 381.3 377 53.1
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 9.8e-104 381.3 379 53.8
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 9.8e-104 381.3 346 55.5
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 4.9e-103 379.0 447 47.9
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 2.4e-102 376.7 446 49.1
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 4.1e-102 375.9 425 50.1
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 4.1e-102 375.9 425 50.1
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 9.2e-102 374.8 383 52.5
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.1e-97 361.3 376 55.1
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 1.0e-92 344.7 338 58.3
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 2.5e-91 340.1 457 46.0
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 2.3e-89 333.6 462 47.0
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 7.8e-85 318.5 337 54.6
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 8.6e-84 315.1 256 62.9
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 1.5e-83 314.3 429 44.8
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 2.5e-83 313.5 352 51.7
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 4.4e-80 302.8 230 67.0
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 3.0e-76 290.0 424 44.1
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 8.7e-76 288.5 370 48.6
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 4.4e-72 276.2 312 51.3
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 4.3e-67 259.6 389 40.1
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 8.1e-66 255.4 462 41.8
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 1.0e-60 238.4 376 41.0
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 1.1e-49 201.8 277 45.5
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 1.1e-49 201.8 249 45.8
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 7.6e-48 195.7 206 51.5
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 1.1e-46 191.8 372 35.5
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 3.2e-46 190.3 365 35.6
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 5.7e-43 179.5 378 34.1
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 1.7e-39 167.9 384 33.1
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 2.7e-29 134.0 114 62.3
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 2.2e-23 114.4 402 28.6
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 7.5e-19 99.4 82 56.1
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 4.5e-16 90.1 173 34.1
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 3.8e-15 87.0 164 37.2
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 6.5e-15 86.3 172 33.1
PRCOL_00003529 Prasinoderma coloniale HOM05D006219 ORTHO05D007562 1.1e-14 85.5 375 25.1
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 2.6e-11 74.3 379 24.3
TAR362G0073 Trochodendron aralioides HOM05D001652 ORTHO05D001768 9.8e-11 72.4 83 49.4
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 1.0e-07 62.4 119 31.1


User provided reference genes

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