Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0163900 Rhododendron simsii HOM05D000030 ORTHO05D338429 2.4e-111 406.0 278 100.0
Rhsim06G0106100 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.1e-18 96.7 208 37.0
Rhsim04G0116500 Rhododendron simsii HOM05D008549 ORTHO05D010234 5.2e-18 95.9 69 78.3
Rhsim06G0015900 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.5e-12 77.8 42 85.7
Rhsim04G0132300 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.3e-12 76.6 41 85.4
Rhsim01G0133900 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.3e-12 75.5 51 72.5
Rhsim01G0156000 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.8e-10 70.9 36 91.7
Rhsim12G0109500 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.1e-10 70.1 41 80.5
Rhsim13G0135100 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.1e-10 70.1 41 80.5
Rhsim13G0141600 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.1e-10 70.1 41 80.5
Rhsim03G0207300 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.8e-10 68.9 41 75.6
Rhsim03G0195100 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.9e-10 68.6 41 73.2
Rhsim05G0120200 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.9e-10 68.6 41 73.2
Rhsim05G0179900 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.9e-10 68.6 41 73.2
Rhsim08G0084900 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.9e-10 68.6 41 73.2
Rhsim09G0082900 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.9e-10 68.6 41 73.2
Rhsim11G0121600 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.9e-10 68.6 41 73.2
Rhsim04G0149600 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.2e-09 68.2 41 70.7
CANSAT35G0226 Cannabis sativa HOM05D000030 ORTHO05D000009 2.6e-09 67.0 41 70.7
Rhsim02G0160600 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.4e-09 66.6 41 68.3
Rhsim08G0115000 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.4e-09 66.6 41 68.3
Rhsim07G0112400 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.8e-09 65.9 41 68.3
Rhsim12G0095000 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.8e-09 65.9 41 68.3
CANSAT21G2238 Cannabis sativa HOM05D000030 ORTHO05D000009 7.5e-09 65.5 41 68.3
CANSAT25G2753 Cannabis sativa HOM05D000030 ORTHO05D000009 7.5e-09 65.5 41 68.3
CANSAT64G0344 Cannabis sativa HOM05D000030 ORTHO05D000009 7.5e-09 65.5 41 65.9
FvH4_1g23531 Fragaria vesca HOM05D000030 ORTHO05D000031 7.5e-09 65.5 41 68.3
Rhsim08G0166400 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.5e-09 65.5 45 62.2
CSS0017195 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 9.8e-09 65.1 41 65.9
FvH4_4g15661 Fragaria vesca HOM05D000030 ORTHO05D000009 1.3e-08 64.7 40 70.0
Rhsim07G0157200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.3e-08 64.7 41 65.9
CSS0008004 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.7e-08 64.3 41 63.4
Rhsim08G0142200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.7e-08 64.3 41 68.3
CSS0016546 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.2e-08 63.9 39 69.2
CSS0032366 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.2e-08 63.9 39 69.2
CSS0039597 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.2e-08 63.9 39 69.2
CSS0040831 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.2e-08 63.9 39 69.2
Rhsim10G0144300 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.2e-08 63.9 41 73.2
Rhsim12G0082200 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.9e-08 63.5 41 68.3
Rhsim09G0060600 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.7e-08 63.2 41 68.3
Rhsim11G0144400 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.7e-08 63.2 41 63.4
Atru.chr4.1060 Acer truncatum HOM05D000030 ORTHO05D000009 4.9e-08 62.8 41 63.4
CSS0001939 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.9e-08 62.8 39 66.7
CSS0012167 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.9e-08 62.8 41 61.0
CSS0037816 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.9e-08 62.8 41 63.4
GSVIVG01019943001 Vitis vinifera HOM05D000030 ORTHO05D000009 4.9e-08 62.8 41 65.9
Rhsim01G0019200 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.3e-08 62.0 41 68.3
Oeu031779.1 Olea europaea HOM05D000030 ORTHO05D000009 1.1e-07 61.6 41 65.9
CSS0002103 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.4e-07 61.2 41 61.0
CSS0008365 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.4e-07 61.2 41 61.0
CSS0017014 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.4e-07 61.2 41 61.0
CSS0029242 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.4e-07 61.2 41 61.0
CSS0029287 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.4e-07 61.2 41 61.0
CSS0032552 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.4e-07 61.2 41 61.0
CSS0034407 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.4e-07 61.2 41 61.0
CSS0038163 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.4e-07 61.2 41 61.0
CSS0042125 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.4e-07 61.2 41 61.0
CSS0043849 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.4e-07 61.2 41 61.0
CSS0049810 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.4e-07 61.2 41 61.0
Atru.chr9.286 Acer truncatum HOM05D000030 ORTHO05D000009 1.9e-07 60.8 41 61.0
CSS0036842 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.9e-07 60.8 41 61.0
CSS0038269 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.4e-07 60.5 39 66.7
CANSAT01G3066 Cannabis sativa HOM05D000030 ORTHO05D000009 2.4e-07 60.5 41 65.9
CSS0014370 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 5.4e-07 59.3 41 61.0
CSS0023651 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 5.4e-07 59.3 41 58.5
Atru.chr3.2674 Acer truncatum HOM05D000030 ORTHO05D000009 7.1e-07 58.9 41 61.0
Hma1.2p1_0066F.1_g036660 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 7.1e-07 58.9 41 61.0
Oeu004592.1 Olea europaea HOM05D000030 ORTHO05D000009 7.1e-07 58.9 41 58.5
Oeu018261.1 Olea europaea HOM05D000030 ORTHO05D000009 7.1e-07 58.9 41 58.5
Oeu029023.1 Olea europaea HOM05D000030 ORTHO05D000009 7.1e-07 58.9 41 58.5
Oeu035339.2 Olea europaea HOM05D000030 ORTHO05D000009 7.1e-07 58.9 41 58.5
Oeu036151.1 Olea europaea HOM05D000030 ORTHO05D000009 7.1e-07 58.9 41 58.5
Atru.chr7.669 Acer truncatum HOM05D000030 ORTHO05D000009 9.2e-07 58.5 41 53.7
SHI36179 Sapria himalayana HOM05D000105 ORTHO05D000009 9.2e-07 58.5 38 65.8
Hund07144 Selenicereus undatus HOM05D000030 ORTHO05D000009 9.2e-07 58.5 41 61.0
Hund13133 Selenicereus undatus HOM05D000030 ORTHO05D000009 9.2e-07 58.5 41 61.0
Hund29994 Selenicereus undatus HOM05D000030 ORTHO05D000009 9.2e-07 58.5 37 70.3
Atru.chr4.55 Acer truncatum HOM05D000030 ORTHO05D000009 1.2e-06 58.2 41 61.0
Dinv01288 Davidia involucrata HOM05D000030 ORTHO05D000009 1.2e-06 58.2 41 63.4
Hma1.2p1_0007F.1_g005280 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.2e-06 58.2 41 61.0
Hma1.2p1_1179F.1_g264470 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.2e-06 58.2 41 61.0
Hma1.2p1_2759F.1_g328050 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.2e-06 58.2 41 61.0
SHI32618 Sapria himalayana HOM05D000030 ORTHO05D000009 1.2e-06 58.2 41 56.1
TPR.G16246 Trifolium pratense HOM05D000030 ORTHO05D000009 1.2e-06 58.2 40 62.5
Atru.chr1.1601 Acer truncatum HOM05D000030 ORTHO05D000009 1.6e-06 57.8 39 61.5
Hund01435 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.6e-06 57.8 37 67.6
Hund22431 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.6e-06 57.8 37 67.6
Atru.chr3.2210 Acer truncatum HOM05D000030 ORTHO05D000009 2.1e-06 57.4 41 51.2
Atru.chr3.2216 Acer truncatum HOM05D000030 ORTHO05D000009 2.1e-06 57.4 41 51.2
Hma1.2p1_0195F.1_g084610 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.1e-06 57.4 41 58.5
PSO135G0777 Papaver somniferum HOM05D000030 ORTHO05D000009 2.1e-06 57.4 41 61.0
PSO198G0059 Papaver somniferum HOM05D000030 ORTHO05D000009 2.1e-06 57.4 41 61.0
PSO210G0247 Papaver somniferum HOM05D000030 ORTHO05D000009 2.1e-06 57.4 41 61.0
PSO478G0147 Papaver somniferum HOM05D000030 ORTHO05D000009 2.1e-06 57.4 41 61.0
PSO675G2294 Papaver somniferum HOM05D000030 ORTHO05D000009 2.1e-06 57.4 41 61.0
PSO782G1812 Papaver somniferum HOM05D000030 ORTHO05D000009 2.1e-06 57.4 41 61.0
Hund12550 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.1e-06 57.4 37 67.6
Hund17876 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.1e-06 57.4 37 67.6
Hund21780 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.1e-06 57.4 37 67.6
Hund25215 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.1e-06 57.4 37 67.6
Hund26132 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.1e-06 57.4 37 67.6
Hund30778 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.1e-06 57.4 37 67.6
Hund31090 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.1e-06 57.4 37 67.6
Atru.chr12.2160 Acer truncatum HOM05D000030 ORTHO05D000009 2.7e-06 57.0 41 51.2
Atru.chr12.2405 Acer truncatum HOM05D005399 ORTHO05D006347 2.7e-06 57.0 41 58.5
CSS0041907 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.7e-06 57.0 41 56.1
Oeu023360.2 Olea europaea HOM05D000030 ORTHO05D000009 2.7e-06 57.0 41 58.5
Oeu045927.1 Olea europaea HOM05D000030 ORTHO05D000009 2.7e-06 57.0 41 56.1
PSO017G7397 Papaver somniferum HOM05D000030 ORTHO05D000009 2.7e-06 57.0 41 61.0
Hund01580 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.7e-06 57.0 39 64.1
Hund07713 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.7e-06 57.0 37 67.6
Hund23668 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.7e-06 57.0 37 67.6
Atru.chr7.117 Acer truncatum HOM05D000030 ORTHO05D000009 3.5e-06 56.6 41 58.5
Hma1.2p1_0849F.1_g228110 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.5e-06 56.6 41 61.0
PSO210G2845 Papaver somniferum HOM05D000030 ORTHO05D000009 3.5e-06 56.6 41 58.5
PSO210G5102 Papaver somniferum HOM05D000030 ORTHO05D000009 3.5e-06 56.6 41 58.5
PSO541G2102 Papaver somniferum HOM05D000030 ORTHO05D000009 3.5e-06 56.6 41 58.5
PSO782G5051 Papaver somniferum HOM05D000030 ORTHO05D000009 3.5e-06 56.6 41 58.5
PSO832G1676 Papaver somniferum HOM05D000030 ORTHO05D000009 3.5e-06 56.6 41 58.5
SHI11118 Sapria himalayana HOM05D000030 ORTHO05D000009 3.5e-06 56.6 38 63.2
Hund00817 Selenicereus undatus HOM05D000030 ORTHO05D000009 3.5e-06 56.6 36 69.4
Hund17417 Selenicereus undatus HOM05D000030 ORTHO05D000009 3.5e-06 56.6 37 64.9
Atru.chr1.3477 Acer truncatum HOM05D000030 ORTHO05D000009 4.6e-06 56.2 41 51.2
Hma1.2p1_0982F.1_g243880 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.6e-06 56.2 41 61.0
Hma1.2p1_1415F.1_g281990 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.6e-06 56.2 41 58.5
Oeu050025.1 Olea europaea HOM05D000030 ORTHO05D000009 4.6e-06 56.2 37 67.6
PSO063G0238 Papaver somniferum HOM05D000030 ORTHO05D000009 4.6e-06 56.2 41 58.5
PSO801G0167 Papaver somniferum HOM05D000030 ORTHO05D000009 4.6e-06 56.2 41 58.5
Atru.chr8.484 Acer truncatum HOM05D000030 ORTHO05D000009 6.0e-06 55.8 41 51.2
Oeu032360.1 Olea europaea HOM05D000030 ORTHO05D000009 6.0e-06 55.8 41 61.0
PSO067G0052 Papaver somniferum HOM05D000030 ORTHO05D000009 6.0e-06 55.8 41 58.5
Rhsim02G0181600 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.0e-06 55.8 41 56.1
SHI12686 Sapria himalayana HOM05D000030 ORTHO05D000009 6.0e-06 55.8 38 63.2
TPR.G22179 Trifolium pratense HOM05D000030 ORTHO05D000009 6.0e-06 55.8 41 56.1
Hma1.2p1_0784F.1_g217220 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 7.8e-06 55.5 41 56.1
SHI02306 Sapria himalayana HOM05D000030 ORTHO05D000009 7.8e-06 55.5 38 63.2
SHI36473 Sapria himalayana HOM05D000030 ORTHO05D000009 7.8e-06 55.5 38 60.5
SHI45448 Sapria himalayana HOM05D000030 ORTHO05D000009 7.8e-06 55.5 38 60.5
SHI47261 Sapria himalayana HOM05D000030 ORTHO05D000009 7.8e-06 55.5 38 60.5
Hund08613 Selenicereus undatus HOM05D000030 ORTHO05D000009 7.8e-06 55.5 37 64.9
Hund10962 Selenicereus undatus HOM05D000030 ORTHO05D000009 7.8e-06 55.5 41 58.5
Hund11129 Selenicereus undatus HOM05D000030 ORTHO05D000009 7.8e-06 55.5 47 53.2
Hund20760 Selenicereus undatus HOM05D000030 ORTHO05D000009 7.8e-06 55.5 35 68.6
Hund25141 Selenicereus undatus HOM05D000030 ORTHO05D000009 7.8e-06 55.5 37 64.9
Hund29359 Selenicereus undatus HOM05D000030 ORTHO05D000009 7.8e-06 55.5 37 64.9


User provided reference genes

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