Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0156900 Rhododendron simsii HOM05D000011 ORTHO05D339114 5.1e-196 687.6 353 100.0
Rhsim05G0158000 Rhododendron simsii HOM05D000011 ORTHO05D009225 3.4e-22 110.2 78 76.9
Rhsim05G0157000 Rhododendron simsii HOM05D000011 ORTHO05D009225 1.1e-20 105.1 78 74.4
Rhsim05G0157200 Rhododendron simsii HOM05D000011 ORTHO05D009225 3.2e-20 103.6 93 64.5
Rhsim03G0242600 Rhododendron simsii HOM05D000011 ORTHO05D009225 5.1e-18 96.3 77 68.8
RhsimUnG0197000 Rhododendron simsii HOM05D000011 ORTHO05D009225 5.1e-18 96.3 77 68.8
Rhsim03G0242700 Rhododendron simsii HOM05D000011 ORTHO05D009225 1.9e-17 94.4 77 68.8
Rhsim05G0154300 Rhododendron simsii HOM05D000011 ORTHO05D009225 2.5e-17 94.0 79 70.9
Rhsim05G0158800 Rhododendron simsii HOM05D000011 ORTHO05D009225 2.5e-17 94.0 79 72.2
Rhsim05G0157600 Rhododendron simsii HOM05D000011 ORTHO05D009225 2.6e-14 84.0 78 60.3
Hma1.2p1_1508F.1_g287760 Hydrangea macrophylla HOM05D000011 ORTHO05D009225 8.7e-10 68.9 83 45.8
Hma1.2p1_1853F.1_g305390 Hydrangea macrophylla HOM05D000011 ORTHO05D009225 1.1e-09 68.6 78 47.4
Hma1.2p1_2292F.1_g319090 Hydrangea macrophylla HOM05D000011 ORTHO05D009225 1.1e-09 68.6 78 47.4
Dinv18871 Davidia involucrata HOM05D000011 ORTHO05D009225 1.5e-09 68.2 78 52.6
Dinv04204 Davidia involucrata HOM05D000011 ORTHO05D009225 2.5e-09 67.4 78 47.4
Hma1.2p1_0518F.1_g171160 Hydrangea macrophylla HOM05D000011 ORTHO05D009225 2.5e-09 67.4 84 46.4
Rhsim02G0067500 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.6e-09 66.2 89 44.9
Oeu032119.3 Olea europaea HOM05D000011 ORTHO05D009225 9.6e-09 65.5 97 41.2
PGSC0003DMG400020586 Solanum tuberosum HOM05D000011 ORTHO05D009225 2.8e-08 63.9 98 39.8
Oeu047724.1 Olea europaea HOM05D000011 ORTHO05D009225 8.1e-08 62.4 97 41.2
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 8.1e-08 62.4 89 48.3
CAN.G1155.29 Capsicum annuum HOM05D000011 ORTHO05D009225 1.1e-07 62.0 79 46.8
Peaxi162Scf00695g00517 Petunia axillaris HOM05D000011 ORTHO05D009225 1.4e-07 61.6 79 43.0
Peaxi162Scf01542g00011 Petunia axillaris HOM05D000011 ORTHO05D009225 1.4e-07 61.6 79 43.0
Peaxi162Scf01562g00004 Petunia axillaris HOM05D000011 ORTHO05D009225 1.4e-07 61.6 79 43.0
Rhsim10G0105300 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.4e-07 61.6 114 36.8
Oeu021299.1 Olea europaea HOM05D000011 ORTHO05D009225 3.1e-07 60.5 97 39.2
CSS0048866 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D009225 4.0e-07 60.1 78 41.0
Solyc09g092300.3 Solanum lycopersicum HOM05D000011 ORTHO05D009225 9.0e-07 58.9 79 41.8
Solyc09g092310.1 Solanum lycopersicum HOM05D000011 ORTHO05D009225 9.0e-07 58.9 79 41.8
PGSC0003DMG400020587 Solanum tuberosum HOM05D000011 ORTHO05D009225 9.0e-07 58.9 79 43.0
CAN.G1155.28 Capsicum annuum HOM05D000011 ORTHO05D009225 1.2e-06 58.5 79 41.8
Rhsim01G0175900 Rhododendron simsii HOM05D001813 ORTHO05D026101 1.2e-06 58.5 205 25.9
Solyc09g018220.3 Solanum lycopersicum HOM05D000011 ORTHO05D009225 1.2e-06 58.5 79 43.0
CAN.G812.15 Capsicum annuum HOM05D000011 ORTHO05D009225 1.5e-06 58.2 79 41.8
Nitab4.5_0003796g0040 Nicotiana tabacum HOM05D000011 ORTHO05D009225 1.5e-06 58.2 78 43.6
Nitab4.5_0009808g0010 Nicotiana tabacum HOM05D000011 ORTHO05D009225 1.5e-06 58.2 78 43.6
PGSC0003DMG400024365 Solanum tuberosum HOM05D000011 ORTHO05D009225 2.0e-06 57.8 79 43.0
Nitab4.5_0001822g0050 Nicotiana tabacum HOM05D000011 ORTHO05D009225 2.6e-06 57.4 94 39.4
Actinidia02750 Actinidia chinensis HOM05D000011 ORTHO05D009225 3.4e-06 57.0 78 43.6
Actinidia20361 Actinidia chinensis HOM05D000011 ORTHO05D009225 3.4e-06 57.0 81 45.7
CAN.G1859.4 Capsicum annuum HOM05D000011 ORTHO05D000018 3.4e-06 57.0 78 43.6
PGSC0003DMG400020584 Solanum tuberosum HOM05D000011 ORTHO05D009225 3.4e-06 57.0 79 41.8
PGSC0003DMG401020585 Solanum tuberosum HOM05D000011 ORTHO05D009225 3.4e-06 57.0 79 41.8
CAN.G1684.7 Capsicum annuum HOM05D000011 ORTHO05D009225 5.8e-06 56.2 79 41.8
CAN.G812.10 Capsicum annuum HOM05D000011 ORTHO05D009225 5.8e-06 56.2 79 40.5
CSS0020460 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D009225 9.9e-06 55.5 78 44.9
Rhsim04G0118100 Rhododendron simsii HOM05D000215 ORTHO05D026101 9.9e-06 55.5 88 40.9


User provided reference genes

Program Settings