Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0152000 Rhododendron simsii HOM05D006753 ORTHO05D008521 4.1e-81 304.7 156 100.0
FAN17G2405 Fragaria x ananassa HOM05D006753 ORTHO05D008521 1.8e-31 139.8 105 68.6
MD13G1001300 Malus domestica HOM05D006753 ORTHO05D008521 3.0e-31 139.0 105 65.7
Duzib052G0750 Durio zibethinus HOM05D006753 ORTHO05D008521 5.1e-31 138.3 128 59.4
RcHm_v2.0_Chr4g0447151 Rosa chinensis HOM05D006753 ORTHO05D008521 6.7e-31 137.9 105 64.8
Thecc.02G152400 Theobroma cacao HOM05D006753 ORTHO05D008521 1.1e-30 137.1 126 58.7
FvH4_4g37311 Fragaria vesca HOM05D006753 ORTHO05D008521 1.5e-30 136.7 105 66.7
FAN07G1749 Fragaria x ananassa HOM05D006753 ORTHO05D008521 1.5e-30 136.7 105 67.6
Duzib132G0454 Durio zibethinus HOM05D006753 ORTHO05D008521 7.4e-30 134.4 106 68.9
GSVIVG01034354001 Vitis vinifera HOM05D006753 ORTHO05D008521 7.4e-30 134.4 107 69.2
QL01p000327 Quercus lobata HOM05D006753 ORTHO05D008521 1.3e-29 133.7 105 64.8
TAR629G2108 Trochodendron aralioides HOM05D006753 ORTHO05D008521 1.3e-29 133.7 107 65.4
Dinv25482 Davidia involucrata HOM05D006753 ORTHO05D008521 2.8e-29 132.5 105 65.7
CANSAT78G0938 Cannabis sativa HOM05D006753 ORTHO05D008521 3.7e-29 132.1 106 64.2
Manes.04G161100 Manihot esculenta HOM05D006753 ORTHO05D008521 3.7e-29 132.1 106 65.1
TWI53G0448 Tripterygium wilfordii HOM05D006753 ORTHO05D008521 1.4e-28 130.2 105 64.8
MELO3C011766.2 Cucumis melo HOM05D006753 ORTHO05D008521 1.8e-28 129.8 106 64.2
Medtr1g115255 Medicago truncatula HOM05D006753 ORTHO05D008521 1.8e-28 129.8 105 61.9
MSTRG.13663 Avicennia marina HOM05D006753 ORTHO05D008521 2.4e-28 129.4 105 62.9
CiPaw.16G000900 Carya illinoinensis HOM05D006753 ORTHO05D008521 2.4e-28 129.4 104 66.3
Lj5g0026283 Lotus japonicus HOM05D006753 ORTHO05D008521 2.4e-28 129.4 105 61.0
Oeu006328.1 Olea europaea HOM05D006753 ORTHO05D008521 2.4e-28 129.4 105 62.9
CsaV3_5G029140 Cucumis sativus L. HOM05D006753 ORTHO05D008521 4.1e-28 128.6 105 63.8
Lalb_Chr02g0144111 Lupinus albus HOM05D006753 ORTHO05D008521 4.1e-28 128.6 106 59.4
CAN.G815.2 Capsicum annuum HOM05D006753 ORTHO05D008521 1.2e-27 127.1 127 57.5
DCAR_023493 Daucus carota HOM05D006753 ORTHO05D008521 1.2e-27 127.1 105 64.8
ECA238G1815 Erigeron canadensis HOM05D006753 ORTHO05D008521 1.2e-27 127.1 106 65.1
Phvul.007G012200 Phaseolus vulgaris HOM05D006753 ORTHO05D008521 1.2e-27 127.1 106 61.3
COL.COLO4_33141 Corchorus olitorius HOM05D006753 ORTHO05D008521 1.5e-27 126.7 134 53.0
Nn3g18540 Nelumbo nucifera HOM05D006753 ORTHO05D008521 2.0e-27 126.3 107 62.6
Sc21g0003760 Simmondsia chinensis HOM05D006753 ORTHO05D008521 2.0e-27 126.3 105 61.9
Ciclev10017207m.g Citrus clementina HOM05D006753 ORTHO05D008521 2.6e-27 125.9 105 65.7
Glyma.10G288900 Glycine max HOM05D006753 ORTHO05D008521 3.4e-27 125.6 107 59.8
Cfa018673 Carpinus fangiana HOM05D006753 ORTHO05D008521 4.5e-27 125.2 107 63.6
Sopen03g009600 Solanum pennellii HOM05D006753 ORTHO05D008521 5.9e-27 124.8 105 61.0
SGA_v2.0_scaffold119G32769 Striga asiatica HOM05D006753 ORTHO05D008521 5.9e-27 124.8 105 62.9
Aqoxy3G04333 Aquilegia oxysepala HOM05D006753 ORTHO05D008521 1.0e-26 124.0 105 58.1
MBI03_g11899_MAGBIO Magnolia biondii HOM05D006753 ORTHO05D008521 1.0e-26 124.0 103 63.1
Nitab4.5_0000075g0200 Nicotiana tabacum HOM05D006753 ORTHO05D008521 1.0e-26 124.0 110 60.0
Sed0019092 Sechium edule HOM05D006753 ORTHO05D008521 1.0e-26 124.0 105 62.9
EL10Ac9g23017 Beta vulgaris HOM05D006753 ORTHO05D008521 1.7e-26 123.2 105 62.9
PGR044G1510 Punica granatum HOM05D006753 ORTHO05D008521 2.2e-26 122.9 105 60.0
Potri.008G003100 Populus trichocarpa HOM05D006753 ORTHO05D008521 3.8e-26 122.1 115 56.5
Atru.chr11.42 Acer truncatum HOM05D006753 ORTHO05D008521 5.0e-26 121.7 106 63.2
Lsat_1_v5_gn_2_64221 Lactuca sativa HOM05D006753 ORTHO05D008521 1.9e-25 119.8 105 62.9
Ca_11278_v3 Cicer arietinum L. HOM05D006753 ORTHO05D008521 3.2e-25 119.0 105 59.0
Nitab4.5_0008337g0010 Nicotiana tabacum HOM05D006753 ORTHO05D008521 4.2e-25 118.6 110 57.3
Migut.E00658 Erythranthe guttata HOM05D006753 ORTHO05D008521 7.2e-25 117.9 104 56.7
Migut.E00593 Erythranthe guttata HOM05D006753 ORTHO05D008521 1.2e-24 117.1 104 56.7
VMungo0720G0065 Vigna mungo HOM05D006753 ORTHO05D008521 1.2e-24 117.1 107 57.0
Nitab4.5_0001307g0130 Nicotiana tabacum HOM05D006753 ORTHO05D008521 1.6e-24 116.7 110 56.4
Sabra08G0001000 Salix brachista HOM05D006753 ORTHO05D008521 1.6e-24 116.7 115 55.7
ATR0124G001 Amborella trichopoda HOM05D006753 ORTHO05D008521 2.1e-24 116.3 105 61.9
PGSC0003DMG400018762 Solanum tuberosum HOM05D006753 ORTHO05D008521 2.1e-24 116.3 105 57.1
AUR62032899 Chenopodium quinoa HOM05D006753 ORTHO05D008521 4.7e-24 115.2 105 57.1
Peaxi162Scf00003g02334 Petunia axillaris HOM05D006753 ORTHO05D008521 4.7e-24 115.2 105 57.1
Os10g0491900 Oryza sativa ssp. japonica HOM05D006753 ORTHO05D008521 7.9e-24 114.4 105 58.1
Zm00001eb044950 Zea mays HOM05D006753 ORTHO05D008521 7.9e-24 114.4 106 56.6
ClCG11G012760 Citrullus lanatus HOM05D006753 ORTHO05D008521 1.4e-23 113.6 106 56.6
CDE05G2438 Ceratophyllum demersum HOM05D006753 ORTHO05D008521 3.0e-23 112.5 107 58.9
Gohir.D12G135600 Gossypium hirsutum HOM05D006753 ORTHO05D008521 3.0e-23 112.5 124 54.0
CDE05G0871 Ceratophyllum demersum HOM05D006753 ORTHO05D008521 6.7e-23 111.3 106 58.5
RcHm_v2.0_Chr5g0030611 Rosa chinensis HOM05D006753 ORTHO05D008521 6.7e-23 111.3 104 57.7
FvH4_3g18161 Fragaria vesca HOM05D006753 ORTHO05D008521 1.5e-22 110.2 103 55.3
FAN11G3971 Fragaria x ananassa HOM05D006753 ORTHO05D008521 1.5e-22 110.2 103 55.3
Gohir.A12G132000 Gossypium hirsutum HOM05D006753 ORTHO05D008521 2.6e-22 109.4 123 52.8
Thhalv10002245m.g Eutrema salsugineum HOM05D006753 ORTHO05D008521 3.3e-22 109.0 105 56.2
Psat6g234480 Pisum sativum HOM05D006753 ORTHO05D008521 5.7e-22 108.2 105 56.2
Gorai.008G146800 Gossypium raimondii HOM05D006753 ORTHO05D008521 7.4e-22 107.8 124 52.4
AUR62017753 Chenopodium quinoa HOM05D006753 ORTHO05D008521 6.3e-21 104.8 104 55.8
AUR62020818 Chenopodium quinoa HOM05D006753 ORTHO05D008521 7.0e-20 101.3 105 52.4
SEGI_09956 Sequoiadendron giganteum HOM05D006753 ORTHO05D008521 7.0e-20 101.3 105 51.4
AT3G52350 Arabidopsis thaliana HOM05D006753 ORTHO05D008521 2.0e-19 99.8 105 54.3
Prupe.1G351400 Prunus persica HOM05D006753 ORTHO05D008521 7.7e-19 97.8 105 52.4
Carub.0005s1869 Capsella rubella HOM05D006753 ORTHO05D008521 1.0e-18 97.4 105 52.4
Pp3c15_7650 Physcomitrium patens HOM05D006753 ORTHO05D008521 1.0e-18 97.4 107 49.5
Sp6g34360 Schrenkiella parvula HOM05D006753 ORTHO05D008521 1.3e-18 97.1 106 57.5
TPR.G4104 Trifolium pratense HOM05D006753 ORTHO05D008521 1.3e-18 97.1 105 53.3
CARHR204450 Cardamine hirsuta HOM05D006753 ORTHO05D008521 2.9e-18 95.9 105 54.3
Eucgr.J00331 Eucalyptus grandis HOM05D006753 ORTHO05D008521 6.5e-18 94.7 155 41.3
AL6G19240 Arabidopsis lyrata HOM05D006753 ORTHO05D008521 7.2e-17 91.3 106 53.8
A10p28190 Brassica napus HOM05D006753 ORTHO05D008521 1.2e-16 90.5 105 52.4
BraA10t44868Z Brassica rapa HOM05D006753 ORTHO05D008521 1.2e-16 90.5 105 52.4
A09p59170 Brassica napus HOM05D006753 ORTHO05D008521 2.7e-16 89.4 105 50.5
BraA09t41301Z Brassica rapa HOM05D006753 ORTHO05D008521 4.7e-16 88.6 105 50.5
Lj6g0020021 Lotus japonicus HOM05D006753 ORTHO05D008521 4.7e-16 88.6 105 48.6
PSO782G2482 Papaver somniferum HOM05D006753 ORTHO05D008521 4.7e-16 88.6 107 47.7
AT5G08535 Arabidopsis thaliana HOM05D006753 ORTHO05D008521 6.1e-16 88.2 105 51.4
PSO063G2822 Papaver somniferum HOM05D006753 ORTHO05D008521 8.0e-16 87.8 107 47.7
C09p68400 Brassica napus HOM05D006753 ORTHO05D008521 1.0e-15 87.4 112 50.9
BcaC07g41240 Brassica carinata HOM05D006753 ORTHO05D008521 1.4e-15 87.0 104 51.0
C08p42460 Brassica napus HOM05D006753 ORTHO05D008521 1.4e-15 87.0 104 51.0
BolC8t51807H Brassica oleracea HOM05D006753 ORTHO05D008521 1.4e-15 87.0 104 51.0
AL5G33000 Arabidopsis lyrata HOM05D006753 ORTHO05D008521 1.8e-15 86.7 105 49.5
Nitab4.5_0002355g0040 Nicotiana tabacum HOM05D006753 ORTHO05D008521 1.8e-15 86.7 92 53.3
BolC9t59587H Brassica oleracea HOM05D006753 ORTHO05D008521 6.7e-15 84.7 112 50.0
BcaB08g34880 Brassica carinata HOM05D006753 ORTHO05D008521 5.7e-14 81.6 128 43.0
HanXRQChr14g0446421 Helianthus annuus HOM05D006753 ORTHO05D008521 1.7e-13 80.1 39 92.3
Cc11_g04160 Coffea canephora HOM05D006753 ORTHO05D008521 2.8e-13 79.3 43 81.4
Thhalv10015604m.g Eutrema salsugineum HOM05D006753 ORTHO05D008521 1.8e-12 76.6 90 55.6
arahy.Tifrunner.gnm1.ann1.IW7U68 Arachis hypogaea HOM05D006753 ORTHO05D008521 2.4e-12 76.3 62 58.1
arahy.Tifrunner.gnm1.ann1.RGG8YR Arachis hypogaea HOM05D006753 ORTHO05D008521 2.4e-12 76.3 62 58.1
Mapoly0001s0293 Marchantia polymorpha HOM05D006753 ORTHO05D008521 2.4e-12 76.3 105 41.9
SHI21226 Sapria himalayana HOM05D000843 ORTHO05D000698 7.0e-12 74.7 64 62.5
Aa31LG3G18000 Aethionema arabicum HOM05D006753 ORTHO05D008521 1.6e-11 73.6 99 46.5
SMO166G0033 Selaginella moellendorffii HOM05D006753 ORTHO05D008521 6.5e-10 68.2 99 40.4
HPP92_003487 Vanilla planifolia HOM05D006753 ORTHO05D008521 6.5e-10 68.2 106 43.4
HPP92_026885 Vanilla planifolia HOM05D006753 ORTHO05D008521 6.5e-10 68.2 106 43.4
Carub.0006s0749 Capsella rubella HOM05D006753 ORTHO05D008521 1.1e-09 67.4 106 45.3
CSS0010672 Camellia sinensis var. sinensis HOM05D006753 ORTHO05D008521 1.5e-09 67.0 44 75.0
SMO115G0110 Selaginella moellendorffii HOM05D000422 ORTHO05D002369 7.2e-09 64.7 97 39.2
BcaB08g37248 Brassica carinata HOM05D006753 ORTHO05D008521 1.6e-08 63.5 97 47.4
vmacro19681 Vaccinium macrocarpon HOM05D006753 ORTHO05D008521 1.0e-07 60.8 136 35.3
CBR_g16096 Chara braunii HOM05D000019 ORTHO05D000002 3.0e-07 59.3 116 36.2
COL.COLO4_21663 Corchorus olitorius HOM05D006753 ORTHO05D008521 3.0e-07 59.3 88 47.7


User provided reference genes

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