Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0147800 Rhododendron simsii HOM05D000097 ORTHO05D000041 7.9e-58 226.9 112 100.0
Rhsim05G0147100 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.3e-17 92.4 103 52.4
Actinidia39662 Actinidia chinensis HOM05D000097 ORTHO05D000041 1.7e-15 86.3 65 61.5
Actinidia30213 Actinidia chinensis HOM05D000097 ORTHO05D000041 5.3e-14 81.3 62 61.3
Actinidia39663 Actinidia chinensis HOM05D000097 ORTHO05D000041 5.3e-14 81.3 65 61.5
Rhsim05G0147400 Rhododendron simsii HOM05D000097 ORTHO05D000041 3.5e-13 78.6 57 66.7
vmacro17197 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 7.7e-13 77.4 57 59.6
vmacro22582 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 7.7e-13 77.4 57 59.6
Rhsim05G0009000 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.0e-12 77.0 69 52.2
Rhsim04G0147100 Rhododendron simsii HOM05D000097 ORTHO05D000041 6.5e-12 74.3 76 46.1
Actinidia30215 Actinidia chinensis HOM05D000097 ORTHO05D000041 8.5e-12 73.9 53 62.3
Actinidia30217 Actinidia chinensis HOM05D000097 ORTHO05D000041 1.5e-11 73.2 74 51.4
Rhsim05G0008700 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.5e-11 73.2 69 53.6
Rhsim11G0103000 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.9e-11 72.8 86 43.0
vmacro17196 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 3.2e-11 72.0 65 55.4
Rhsim13G0212200 Rhododendron simsii HOM05D000097 ORTHO05D000041 4.2e-11 71.6 53 62.3
RhsimUnG0192800 Rhododendron simsii HOM05D000097 ORTHO05D000041 9.4e-11 70.5 61 50.8
Rhsim01G0084100 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.2e-10 70.1 52 61.5
Rhsim05G0010200 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.6e-10 69.7 61 50.8
Rhsim05G0007900 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.1e-10 69.3 56 55.4
Rhsim12G0057200 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.1e-10 69.3 69 46.4
Oeu060648.2 Olea europaea HOM05D000097 ORTHO05D000041 1.8e-09 66.2 67 53.7
vmacro17198 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 5.2e-09 64.7 57 52.6
HanXRQChr11g0353601 Helianthus annuus HOM05D000097 ORTHO05D000041 8.8e-09 63.9 81 44.4
Lsat_1_v5_gn_1_43320 Lactuca sativa HOM05D000097 ORTHO05D000041 8.8e-09 63.9 64 48.4
Rhsim13G0212100 Rhododendron simsii HOM05D000097 ORTHO05D000041 8.8e-09 63.9 52 57.7
Rhsim03G0102500 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.0e-08 62.8 62 45.2
Rhsim03G0103100 Rhododendron simsii HOM05D004152 ORTHO05D004878 2.0e-08 62.8 62 45.2
Hma1.2p1_0446F.1_g154550 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.6e-08 62.4 55 58.2
Hma1.2p1_0446F.1_g154555 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.6e-08 62.4 55 58.2
Rhsim11G0103100 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.6e-08 62.4 53 54.7
Ah.04g154450 Amaranthus hybridus HOM05D000097 ORTHO05D000041 3.4e-08 62.0 82 40.2
AUR62029391 Chenopodium quinoa HOM05D000097 ORTHO05D000041 3.4e-08 62.0 62 48.4
EL10Ac2g04359 Beta vulgaris HOM05D000097 ORTHO05D000041 5.7e-08 61.2 81 39.5
HanXRQChr11g0353571 Helianthus annuus HOM05D000097 ORTHO05D000041 5.7e-08 61.2 55 54.5
Hund19270 Selenicereus undatus HOM05D000097 ORTHO05D000041 5.7e-08 61.2 81 44.4
AUR62003460 Chenopodium quinoa HOM05D000097 ORTHO05D000041 7.5e-08 60.8 62 48.4
ECA248G1065 Erigeron canadensis HOM05D000097 ORTHO05D000041 7.5e-08 60.8 63 47.6
Lsat_1_v5_gn_6_85720 Lactuca sativa HOM05D000097 ORTHO05D000041 9.8e-08 60.5 82 35.4
Manes.05G191900 Manihot esculenta HOM05D000097 ORTHO05D000041 1.3e-07 60.1 64 45.3
Rhsim03G0104500 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.3e-07 60.1 76 39.5
AUR62029394 Chenopodium quinoa HOM05D000097 ORTHO05D000041 1.7e-07 59.7 62 46.8
AUR62003462 Chenopodium quinoa HOM05D000097 ORTHO05D000041 2.2e-07 59.3 62 45.2
Lj7C688G18 Lonicera japonica HOM05D000097 ORTHO05D000041 2.8e-07 58.9 47 55.3
Migut.L01561 Erythranthe guttata HOM05D000097 ORTHO05D000041 3.7e-07 58.5 56 48.2
Rhsim03G0102900 Rhododendron simsii HOM05D032117 ORTHO05D000041 3.7e-07 58.5 62 41.9
Lj9C21T5 Lonicera japonica HOM05D000097 ORTHO05D000041 4.8e-07 58.2 57 43.9
Lju363A0T14 Lonicera japonica HOM05D000097 ORTHO05D000041 4.8e-07 58.2 57 43.9
Manes.04G145050 Manihot esculenta HOM05D000097 ORTHO05D000041 4.8e-07 58.2 68 39.7
Dinv10726 Davidia involucrata HOM05D000097 ORTHO05D000041 8.3e-07 57.4 48 54.2
CSS0017374 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 1.1e-06 57.0 60 40.0
Dinv03293 Davidia involucrata HOM05D000097 ORTHO05D000041 1.4e-06 56.6 53 52.8
Dinv11240 Davidia involucrata HOM05D000097 ORTHO05D000041 1.4e-06 56.6 53 52.8
Lsat_1_v5_gn_1_92640 Lactuca sativa HOM05D000097 ORTHO05D000041 1.4e-06 56.6 66 37.9
Lj3C929T0 Lonicera japonica HOM05D000097 ORTHO05D000041 1.4e-06 56.6 74 36.5
HanXRQChr11g0353581 Helianthus annuus HOM05D000097 ORTHO05D000041 1.8e-06 56.2 55 50.9
Lju363A1T23 Lonicera japonica HOM05D000097 ORTHO05D000041 1.8e-06 56.2 57 42.1
HanXRQChr01g0028891 Helianthus annuus HOM05D000097 ORTHO05D000041 2.4e-06 55.8 116 26.7
TWI63G0469 Tripterygium wilfordii HOM05D000097 ORTHO05D000041 2.4e-06 55.8 59 45.8
Eucgr.C03494 Eucalyptus grandis HOM05D000097 ORTHO05D000041 3.1e-06 55.5 69 40.6
Cc06_g12370 Coffea canephora HOM05D000097 ORTHO05D000041 4.1e-06 55.1 61 45.9
Dinv06773 Davidia involucrata HOM05D000097 ORTHO05D000041 4.1e-06 55.1 62 41.9
Hma1.2p1_0446F.1_g154540 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 4.1e-06 55.1 56 46.4
Hma1.2p1_0560F.1_g178780 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 4.1e-06 55.1 63 39.7
vmacro07234 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 4.1e-06 55.1 75 37.3
AUR62017770 Chenopodium quinoa HOM05D000097 ORTHO05D000041 5.4e-06 54.7 63 42.9
Cc06_g12350 Coffea canephora HOM05D000097 ORTHO05D000041 5.4e-06 54.7 51 52.9
Dinv03005 Davidia involucrata HOM05D000097 ORTHO05D000041 5.4e-06 54.7 62 46.8
TWI63G1525 Tripterygium wilfordii HOM05D000097 ORTHO05D000041 5.4e-06 54.7 59 44.1
Dinv11324 Davidia involucrata HOM05D000097 ORTHO05D000041 7.0e-06 54.3 60 40.0
ECA247G0481 Erigeron canadensis HOM05D000097 ORTHO05D000041 7.0e-06 54.3 61 36.1
ECA248G0302 Erigeron canadensis HOM05D000097 ORTHO05D000041 7.0e-06 54.3 67 46.3
PSO832G2950 Papaver somniferum HOM05D000097 ORTHO05D000041 7.0e-06 54.3 108 30.6
Rhsim05G0010300 Rhododendron simsii HOM05D000097 ORTHO05D000041 7.0e-06 54.3 61 44.3
Haze_10822 Corylus avellana HOM05D000097 ORTHO05D000041 9.1e-06 53.9 65 38.5
Dinv42388 Davidia involucrata HOM05D000097 ORTHO05D000041 9.1e-06 53.9 101 28.7
TAR626G0498 Trochodendron aralioides HOM05D000097 ORTHO05D000041 9.1e-06 53.9 66 40.9


User provided reference genes

Program Settings