Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0142100 Rhododendron simsii HOM05D000034 ORTHO05D000285 0.0e+00 1082.0 536 100.0
Rhsim08G0093200 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.9e-174 615.9 1115 39.8
Rhsim05G0142000 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.9e-155 552.4 519 60.9
Rhsim09G0055100 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.6e-148 529.3 794 45.3
RhsimUnG0152200 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.6e-148 529.3 1048 37.0
Rhsim09G0200000 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.0e-147 526.2 984 38.4
Rhsim03G0048400 Rhododendron simsii HOM05D000034 ORTHO05D000037 6.1e-132 475.3 1041 35.3
Rhsim05G0083000 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.9e-118 429.9 449 54.8
Rhsim13G0157600 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.8e-113 413.3 579 46.8
Rhsim02G0038000 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.2e-109 399.4 580 45.9
Rhsim02G0240900 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.0e-99 368.2 576 41.7
Rhsim02G0037900 Rhododendron simsii HOM05D000034 ORTHO05D000285 3.6e-84 316.6 225 74.7
Rhsim01G0089000 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.8e-83 314.3 578 38.1
Rhsim05G0084200 Rhododendron simsii HOM05D000034 ORTHO05D000285 1.3e-78 298.1 225 70.7
Rhsim04G0145400 Rhododendron simsii HOM05D000034 ORTHO05D000285 2.3e-78 297.4 225 71.1
Rhsim10G0163900 Rhododendron simsii HOM05D000034 ORTHO05D000285 5.6e-77 292.7 225 70.7
Rhsim04G0145300 Rhododendron simsii HOM05D000034 ORTHO05D000037 8.1e-76 288.9 510 39.0
Rhsim01G0089100 Rhododendron simsii HOM05D000034 ORTHO05D000285 4.7e-68 263.1 228 64.9
Rhsim02G0172800 Rhododendron simsii HOM05D000034 ORTHO05D000285 6.2e-52 209.5 503 33.6
Rhsim05G0084100 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.2e-40 170.6 159 61.6
Rhsim07G0158400 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.6e-34 151.0 110 67.3
Rhsim10G0164000 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.2e-33 147.9 90 84.4
Rhsim08G0142700 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.6e-31 141.7 85 84.7
vmacro09328 Vaccinium macrocarpon HOM05D000034 ORTHO05D000285 1.8e-30 138.3 220 41.8
Rhsim01G0123300 Rhododendron simsii HOM05D000034 ORTHO05D000037 8.8e-30 136.0 377 34.0
vmacro19158 Vaccinium macrocarpon HOM05D000034 ORTHO05D000285 1.5e-21 108.6 112 52.7
CSS0014704 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.1e-16 92.4 169 34.9
CSS0024057 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.1e-16 92.4 169 34.9
CSS0015075 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 9.4e-16 89.4 169 34.3
vmacro17790 Vaccinium macrocarpon HOM05D001332 ORTHO05D001894 6.1e-15 86.7 413 25.4
RhsimUnG0182500 Rhododendron simsii HOM05D000034 ORTHO05D000037 8.0e-15 86.3 67 74.6
Actinidia04386 Actinidia chinensis HOM05D000876 ORTHO05D000285 1.1e-13 82.4 152 33.6
Actinidia07377 Actinidia chinensis HOM05D000876 ORTHO05D000285 1.1e-13 82.4 152 33.6
Actinidia15148 Actinidia chinensis HOM05D000876 ORTHO05D000285 1.1e-13 82.4 152 33.6
CSS0047854 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.4e-13 80.5 195 30.3
CSS0038692 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-12 79.0 157 32.5
CSS0014901 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 3.7e-12 77.4 166 31.3
CSS0045263 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 4.8e-12 77.0 159 30.8
Rhsim12G0127300 Rhododendron simsii HOM05D000876 ORTHO05D000285 8.2e-12 76.3 149 33.6
vmacro10668 Vaccinium macrocarpon HOM05D016670 ORTHO05D000285 1.1e-11 75.9 144 33.3
CSS0013298 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 1.4e-11 75.5 148 31.8
Actinidia36308 Actinidia chinensis HOM05D000876 ORTHO05D000285 3.1e-11 74.3 153 28.1
Rhsim02G0123200 Rhododendron simsii HOM05D016670 ORTHO05D000285 3.1e-11 74.3 159 30.2
Rhsim10G0025100 Rhododendron simsii HOM05D016670 ORTHO05D000285 5.3e-11 73.6 147 30.6
CSS0018277 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 9.1e-11 72.8 154 31.8
CSS0005680 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.2e-10 72.4 178 32.6
CSS0029673 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 1.6e-10 72.0 148 31.8
CSS0036694 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 3.5e-10 70.9 142 31.0
vmacro21219 Vaccinium macrocarpon HOM05D000034 ORTHO05D000037 4.5e-10 70.5 176 28.4
CSS0005143 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 5.9e-10 70.1 148 31.8
Aqoxy4G01436 Aquilegia oxysepala HOM05D000034 ORTHO05D000285 1.0e-09 69.3 160 30.0
Aqoxy7G02664 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.2e-09 68.2 160 29.4
Atru.chr11.998 Acer truncatum HOM05D000876 ORTHO05D000285 2.9e-09 67.8 158 30.4
CSS0027195 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 6.5e-09 66.6 134 32.1
CSS0039704 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 6.5e-09 66.6 148 30.4
Atru.chr2.2393 Acer truncatum HOM05D000034 ORTHO05D000037 8.5e-09 66.2 158 29.7
TWI39G0385 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 8.5e-09 66.2 148 28.4
CSS0031319 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 1.1e-08 65.9 142 30.3
CSS0003904 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.5e-08 64.7 203 29.1
CSS0012224 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 2.5e-08 64.7 148 29.7
CSS0015688 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 3.2e-08 64.3 128 29.7
CANSAT56G2973 Cannabis sativa HOM05D000876 ORTHO05D000285 3.2e-08 64.3 149 32.9
vmacro19576 Vaccinium macrocarpon HOM05D000034 ORTHO05D000285 5.5e-08 63.5 73 45.2
TWI75G0795 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 9.4e-08 62.8 150 26.0
CSS0041660 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 1.2e-07 62.4 151 27.8
CSS0049064 Camellia sinensis var. sinensis HOM05D025271 ORTHO05D000285 1.2e-07 62.4 82 36.6
Rhsim06G0093500 Rhododendron simsii HOM05D000876 ORTHO05D000285 1.2e-07 62.4 204 27.5
CSS0020821 Camellia sinensis var. sinensis HOM05D025271 ORTHO05D000285 1.6e-07 62.0 164 29.3
Rhsim05G0157800 Rhododendron simsii HOM05D000876 ORTHO05D000285 1.6e-07 62.0 204 27.5
CSS0049565 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.1e-07 61.6 132 31.1
vmacro10666 Vaccinium macrocarpon HOM05D010762 ORTHO05D000285 2.1e-07 61.6 197 28.4
TWI75G0526 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 3.6e-07 60.8 150 25.3
CSS0028966 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 4.7e-07 60.5 146 28.8
TWI34G1697 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 6.1e-07 60.1 150 26.7
TWI36G1398 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 6.1e-07 60.1 150 24.7
Rhsim10G0146900 Rhododendron simsii HOM05D000876 ORTHO05D000285 8.0e-07 59.7 181 27.6
TWI81G0918 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 8.0e-07 59.7 150 24.7
TAR555G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 8.0e-07 59.7 172 26.7
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 1.0e-06 59.3 145 29.7
CANSAT78G1247 Cannabis sativa HOM05D000876 ORTHO05D000285 1.0e-06 59.3 147 29.3
Atru.chr12.1553 Acer truncatum HOM05D000876 ORTHO05D000285 1.4e-06 58.9 92 34.8
FvH4_4g20923 Fragaria vesca HOM05D000876 ORTHO05D000285 1.8e-06 58.5 157 28.0
FvH4_5g23913 Fragaria vesca HOM05D000876 ORTHO05D000285 1.8e-06 58.5 157 28.0
TWI75G0176 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.8e-06 58.5 88 31.8
Atru.chr10.1597 Acer truncatum HOM05D000876 ORTHO05D000285 3.0e-06 57.8 94 33.0
CANSAT01G0041 Cannabis sativa HOM05D000876 ORTHO05D000285 3.0e-06 57.8 147 28.6
CiPaw.08G099200 Carya illinoinensis HOM05D000876 ORTHO05D000285 3.0e-06 57.8 184 25.0
Glyma.19G101700 Glycine max HOM05D000876 ORTHO05D000285 4.0e-06 57.4 179 26.8
QL05p031161 Quercus lobata HOM05D000034 ORTHO05D000037 4.0e-06 57.4 181 23.2
Rhsim03G0199100 Rhododendron simsii HOM05D016670 ORTHO05D000285 4.0e-06 57.4 77 31.2
vmacro21342 Vaccinium macrocarpon HOM05D000034 ORTHO05D000037 5.2e-06 57.0 97 35.1
vmacro01452 Vaccinium macrocarpon HOM05D000034 ORTHO05D000037 6.7e-06 56.6 179 32.4


User provided reference genes

Program Settings