Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0134000 Rhododendron simsii HOM05D000947 ORTHO05D000079 1.2e-55 219.5 107 100.0
vmacro19717 Vaccinium macrocarpon HOM05D000947 ORTHO05D000079 4.3e-13 78.2 60 66.7
GSVIVG01031203001 Vitis vinifera HOM05D000947 ORTHO05D000079 2.6e-10 68.9 40 75.0
Actinidia35532 Actinidia chinensis HOM05D000947 ORTHO05D000079 3.4e-10 68.6 40 72.5
Dinv24417 Davidia involucrata HOM05D000947 ORTHO05D000079 1.0e-09 67.0 51 60.8
CSS0018452 Camellia sinensis var. sinensis HOM05D000947 ORTHO05D000079 6.5e-09 64.3 40 70.0
Medtr7g112330 Medicago truncatula HOM05D000947 ORTHO05D000079 4.2e-08 61.6 35 71.4
Hund07127 Selenicereus undatus HOM05D000947 ORTHO05D000079 4.2e-08 61.6 33 72.7
Actinidia02207 Actinidia chinensis HOM05D000947 ORTHO05D000079 5.5e-08 61.2 48 60.4
CSS0049513 Camellia sinensis var. sinensis HOM05D000947 ORTHO05D000079 5.5e-08 61.2 52 55.8
Dinv30862 Davidia involucrata HOM05D000947 ORTHO05D000079 5.5e-08 61.2 44 63.6
Gohir.D13G180900 Gossypium hirsutum HOM05D000947 ORTHO05D000079 7.1e-08 60.8 42 71.4
Gorai.013G206400 Gossypium raimondii HOM05D000947 ORTHO05D000079 7.1e-08 60.8 42 71.4
CANSAT54G2371 Cannabis sativa HOM05D000947 ORTHO05D000079 9.3e-08 60.5 51 51.0
TAR636G3276 Trochodendron aralioides HOM05D000947 ORTHO05D000079 9.3e-08 60.5 41 58.5
COL.COLO4_04128 Corchorus olitorius HOM05D000947 ORTHO05D000079 1.2e-07 60.1 44 61.4
EL10Ac4g09843 Beta vulgaris HOM05D000299 ORTHO05D000079 1.6e-07 59.7 33 72.7
CDE11G0437 Ceratophyllum demersum HOM05D000947 ORTHO05D000079 1.6e-07 59.7 32 75.0
Gohir.A13G175000 Gossypium hirsutum HOM05D000947 ORTHO05D000079 2.1e-07 59.3 42 69.0
Oeu053691.1 Olea europaea HOM05D000947 ORTHO05D000079 2.1e-07 59.3 31 77.4
arahy.Tifrunner.gnm1.ann1.4Y7J59 Arachis hypogaea HOM05D000947 ORTHO05D000079 2.7e-07 58.9 40 62.5
Actinidia21512 Actinidia chinensis HOM05D000947 ORTHO05D000079 3.5e-07 58.5 41 65.9
CDE05G2605 Ceratophyllum demersum HOM05D000947 ORTHO05D000079 3.5e-07 58.5 32 71.9
MBI18_g05085_MAGBIO Magnolia biondii HOM05D000947 ORTHO05D000079 3.5e-07 58.5 39 64.1
Psat0s2521g0040 Pisum sativum HOM05D000947 ORTHO05D000079 3.5e-07 58.5 35 68.6
Ca_09303_v3 Cicer arietinum L. HOM05D000947 ORTHO05D000079 4.6e-07 58.2 35 68.6
Glyma.19G229900 Glycine max HOM05D000947 ORTHO05D000079 4.6e-07 58.2 50 54.0
Lalb_Chr18g0045981 Lupinus albus HOM05D000299 ORTHO05D000079 4.6e-07 58.2 35 68.6
MBI18_g04586_MAGBIO Magnolia biondii HOM05D000947 ORTHO05D000079 6.0e-07 57.8 39 61.5
Phvul.001G226500 Phaseolus vulgaris HOM05D000947 ORTHO05D000079 6.0e-07 57.8 34 67.6
Ah.06g189070 Amaranthus hybridus HOM05D000947 ORTHO05D000079 1.0e-06 57.0 33 69.7
Duzib177G0773 Durio zibethinus HOM05D000947 ORTHO05D000079 1.0e-06 57.0 42 61.9
PGSC0003DMG400024783 Solanum tuberosum HOM05D000947 ORTHO05D000079 1.0e-06 57.0 40 62.5
Glyma.03G232900 Glycine max HOM05D000299 ORTHO05D000079 1.3e-06 56.6 33 69.7
Gohir.D13G114000 Gossypium hirsutum HOM05D000947 ORTHO05D000079 1.3e-06 56.6 41 61.0
Gorai.013G127900 Gossypium raimondii HOM05D000947 ORTHO05D000079 1.3e-06 56.6 41 61.0
Nitab4.5_0002715g0010 Nicotiana tabacum HOM05D000947 ORTHO05D000079 1.3e-06 56.6 40 60.0
TPR.G1666 Trifolium pratense HOM05D000947 ORTHO05D000079 1.3e-06 56.6 35 65.7
Nn4g25675 Nelumbo nucifera HOM05D000947 ORTHO05D000079 1.8e-06 56.2 45 53.3
SalBow7G3126 Salvia bowleyana HOM05D000947 ORTHO05D000079 1.8e-06 56.2 46 58.7
Solyc01g100220.3 Solanum lycopersicum HOM05D000947 ORTHO05D000079 1.8e-06 56.2 39 64.1
VMungo1383G0309 Vigna mungo HOM05D000947 ORTHO05D000079 2.3e-06 55.8 28 78.6
Eucgr.B02079 Eucalyptus grandis HOM05D000947 ORTHO05D000079 3.0e-06 55.5 34 73.5
Prupe.6G316000 Prunus persica HOM05D000947 ORTHO05D000079 3.0e-06 55.5 40 57.5
TWI36G0181 Tripterygium wilfordii HOM05D000947 ORTHO05D000079 3.0e-06 55.5 37 67.6
Haze_04091 Corylus avellana HOM05D000947 ORTHO05D000079 3.9e-06 55.1 33 69.7
Glyma.07G243000 Glycine max HOM05D000947 ORTHO05D000079 3.9e-06 55.1 47 53.2
Glyma.17G030900 Glycine max HOM05D000947 ORTHO05D000079 3.9e-06 55.1 47 53.2
Lalb_Chr13g0298321 Lupinus albus HOM05D000947 ORTHO05D000079 3.9e-06 55.1 51 49.0
Nitab4.5_0000368g0380 Nicotiana tabacum HOM05D000947 ORTHO05D000079 3.9e-06 55.1 39 61.5
VMungo1215G1095 Vigna mungo HOM05D000947 ORTHO05D000079 3.9e-06 55.1 47 53.2
GSVIVG01035048001 Vitis vinifera HOM05D000947 ORTHO05D000079 3.9e-06 55.1 38 60.5
CiPaw.08G157500 Carya illinoinensis HOM05D000947 ORTHO05D000079 5.1e-06 54.7 53 52.8
Ciclev10006161m.g Citrus clementina HOM05D000947 ORTHO05D000079 5.1e-06 54.7 39 56.4
Gohir.A12G127400 Gossypium hirsutum HOM05D000947 ORTHO05D000079 5.1e-06 54.7 46 58.7
Gohir.A13G111375 Gossypium hirsutum HOM05D000947 ORTHO05D000079 5.1e-06 54.7 29 75.9
Manes.01G224400 Manihot esculenta HOM05D000947 ORTHO05D000079 5.1e-06 54.7 40 52.5
Thecc.05G319600 Theobroma cacao HOM05D000947 ORTHO05D000079 5.1e-06 54.7 29 75.9
Actinidia30312 Actinidia chinensis HOM05D000947 ORTHO05D000079 6.7e-06 54.3 51 51.0
ClCG06G004790 Citrullus lanatus HOM05D000947 ORTHO05D000079 6.7e-06 54.3 39 59.0
Lj1g0012894 Lotus japonicus HOM05D000947 ORTHO05D000079 6.7e-06 54.3 30 73.3
Potri.002G199800 Populus trichocarpa HOM05D000947 ORTHO05D000079 6.7e-06 54.3 36 55.6
Duzib106G0473 Durio zibethinus HOM05D000947 ORTHO05D000079 8.7e-06 53.9 53 50.9
Duzib106G1584 Durio zibethinus HOM05D000947 ORTHO05D000079 8.7e-06 53.9 53 50.9
Manes.09G174900 Manihot esculenta HOM05D000947 ORTHO05D000079 8.7e-06 53.9 31 71.0
Nn3g21608 Nelumbo nucifera HOM05D000947 ORTHO05D000079 8.7e-06 53.9 30 70.0
QL03p018017 Quercus lobata HOM05D000947 ORTHO05D000079 8.7e-06 53.9 40 60.0


User provided reference genes

Program Settings