Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0125000 Rhododendron simsii HOM05D004979 ORTHO05D006190 1.3e-122 443.0 215 100.0
vmacro22232 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 1.2e-27 127.5 270 37.4
Rhsim04G0165200 Rhododendron simsii HOM05D004979 ORTHO05D006190 3.6e-27 125.9 142 52.8
Rhsim01G0213000 Rhododendron simsii HOM05D004979 ORTHO05D006190 2.4e-26 123.2 299 35.5
CSS0020926 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 5.2e-26 122.1 270 35.2
CSS0020951 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 5.2e-26 122.1 270 35.2
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 2.2e-24 116.7 307 33.2
Dinv24526 Davidia involucrata HOM05D004979 ORTHO05D006190 1.9e-23 113.6 265 32.5
Nn7g38157 Nelumbo nucifera HOM05D004979 ORTHO05D006190 1.9e-23 113.6 212 36.3
Peaxi162Scf00212g00515 Petunia axillaris HOM05D004979 ORTHO05D006190 9.3e-23 111.3 309 30.4
Cc02_g36050 Coffea canephora HOM05D004979 ORTHO05D006190 1.6e-22 110.5 270 32.2
Duzib114G0072 Durio zibethinus HOM05D004979 ORTHO05D006190 4.6e-22 109.0 270 31.9
CAN.G756.6 Capsicum annuum HOM05D004979 ORTHO05D006190 6.0e-22 108.6 269 31.2
Cc02_g36100 Coffea canephora HOM05D004979 ORTHO05D006190 1.0e-21 107.8 270 32.2
GSVIVG01007211001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.0e-21 107.8 270 31.9
PGSC0003DMG400001886 Solanum tuberosum HOM05D004979 ORTHO05D006190 1.7e-21 107.1 269 30.9
Oeu061912.1 Olea europaea HOM05D004979 ORTHO05D006190 3.0e-21 106.3 317 30.3
TAR636G2920 Trochodendron aralioides HOM05D004979 ORTHO05D006190 3.0e-21 106.3 270 31.9
CsaV3_6G013140 Cucumis sativus L. HOM05D004979 ORTHO05D006190 3.9e-21 105.9 307 30.3
Solyc04g055190.4 Solanum lycopersicum HOM05D004979 ORTHO05D006190 3.9e-21 105.9 269 30.9
Lj5C315T9 Lonicera japonica HOM05D004979 ORTHO05D006190 5.1e-21 105.5 267 33.3
Hund05397 Selenicereus undatus HOM05D004979 ORTHO05D006190 5.1e-21 105.5 269 31.6
Aa31LG2G11270 Aethionema arabicum HOM05D004979 ORTHO05D006190 6.6e-21 105.1 274 30.3
Thhalv10023409m.g Eutrema salsugineum HOM05D004979 ORTHO05D006190 6.6e-21 105.1 270 31.1
HanXRQChr11g0327151 Helianthus annuus HOM05D004979 ORTHO05D006190 8.7e-21 104.8 269 30.9
QL03p011287 Quercus lobata HOM05D004979 ORTHO05D006190 1.1e-20 104.4 269 30.9
Thecc.05G331000 Theobroma cacao HOM05D004979 ORTHO05D006190 1.1e-20 104.4 269 30.9
MELO3C019579.2 Cucumis melo HOM05D004979 ORTHO05D006190 1.5e-20 104.0 307 29.6
Actinidia22849 Actinidia chinensis HOM05D004979 ORTHO05D006190 1.9e-20 103.6 323 31.3
ECA234G3247 Erigeron canadensis HOM05D004979 ORTHO05D006190 2.5e-20 103.2 270 30.7
Aqoxy1G02435 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 3.3e-20 102.8 270 31.5
CAN.G1715.7 Capsicum annuum HOM05D004979 ORTHO05D006190 3.3e-20 102.8 270 31.1
CiPaw.01G000500 Carya illinoinensis HOM05D004979 ORTHO05D006190 3.3e-20 102.8 270 30.4
EL10Ac8g20414 Beta vulgaris HOM05D004979 ORTHO05D006190 4.3e-20 102.4 270 30.0
AL1G67180 Arabidopsis lyrata HOM05D004979 ORTHO05D006190 5.6e-20 102.1 270 30.4
Carub.0002s0703 Capsella rubella HOM05D004979 ORTHO05D006190 5.6e-20 102.1 270 30.4
Manes.08G106500 Manihot esculenta HOM05D004979 ORTHO05D006190 5.6e-20 102.1 314 29.0
Prupe.1G583400 Prunus persica HOM05D004979 ORTHO05D006190 5.6e-20 102.1 270 30.7
AT1G57600 Arabidopsis thaliana HOM05D004979 ORTHO05D006190 7.3e-20 101.7 270 29.6
Sed0004859 Sechium edule HOM05D004979 ORTHO05D006190 9.6e-20 101.3 307 29.6
CARHR054720 Cardamine hirsuta HOM05D004979 ORTHO05D006190 1.6e-19 100.5 270 30.0
Sc05g0004380 Simmondsia chinensis HOM05D004979 ORTHO05D006190 1.6e-19 100.5 270 30.4
Ciclev10028175m.g Citrus clementina HOM05D004979 ORTHO05D006190 2.1e-19 100.1 307 29.3
THA.LOC104816839 Tarenaya hassleriana HOM05D004979 ORTHO05D006190 2.1e-19 100.1 270 30.4
PSO357G0276 Papaver somniferum HOM05D004979 ORTHO05D006190 2.8e-19 99.8 270 30.7
RcHm_v2.0_Chr1g0332651 Rosa chinensis HOM05D004979 ORTHO05D006190 2.8e-19 99.8 270 29.6
Atru.chr12.1512 Acer truncatum HOM05D004979 ORTHO05D006190 3.6e-19 99.4 270 31.5
MSTRG.16439 Avicennia marina HOM05D004979 ORTHO05D006190 3.6e-19 99.4 319 28.8
Glyma.10G273100 Glycine max HOM05D004979 ORTHO05D006190 3.6e-19 99.4 270 29.6
Gohir.A13G003700 Gossypium hirsutum HOM05D004979 ORTHO05D006190 4.8e-19 99.0 270 30.0
PSO170G1924 Papaver somniferum HOM05D004979 ORTHO05D006190 6.2e-19 98.6 270 31.1
Gohir.D13G003600 Gossypium hirsutum HOM05D004979 ORTHO05D006190 8.1e-19 98.2 270 30.0
Gorai.013G003500 Gossypium raimondii HOM05D004979 ORTHO05D006190 8.1e-19 98.2 270 30.0
SalBow5G4822 Salvia bowleyana HOM05D004979 ORTHO05D006190 8.1e-19 98.2 263 30.0
FvH4_7g05560 Fragaria vesca HOM05D004979 ORTHO05D006190 1.1e-18 97.8 270 29.3
MD08G1246100 Malus domestica HOM05D004979 ORTHO05D006190 1.1e-18 97.8 270 29.3
TWI60G1029 Tripterygium wilfordii HOM05D004979 ORTHO05D006190 1.1e-18 97.8 270 28.9
BcaB07g31145 Brassica carinata HOM05D004979 ORTHO05D006190 1.8e-18 97.1 271 30.3
Sp2g05910 Schrenkiella parvula HOM05D004979 ORTHO05D006190 2.4e-18 96.7 271 30.3
SpUn0028_0030 Schrenkiella parvula HOM05D004979 ORTHO05D006190 2.4e-18 96.7 271 30.3
Migut.B00894 Erythranthe guttata HOM05D004979 ORTHO05D006190 3.1e-18 96.3 316 28.8
FAN01G0279 Fragaria x ananassa HOM05D004979 ORTHO05D006190 3.1e-18 96.3 270 29.3
Potri.013G000600 Populus trichocarpa HOM05D004979 ORTHO05D006190 4.0e-18 95.9 269 29.4
TPR.G18815 Trifolium pratense HOM05D004979 ORTHO05D006190 5.3e-18 95.5 270 30.4
TPR.G33173 Trifolium pratense HOM05D004979 ORTHO05D006190 5.3e-18 95.5 270 30.4
Lsat_1_v5_gn_5_7121 Lactuca sativa HOM05D004979 ORTHO05D006190 6.9e-18 95.1 276 28.6
Lj5g0020513 Lotus japonicus HOM05D004979 ORTHO05D006190 6.9e-18 95.1 270 29.3
Lalb_Chr04g0254641 Lupinus albus HOM05D004979 ORTHO05D006190 6.9e-18 95.1 270 29.3
unitig_22.g6127 Utricularia gibba HOM05D004979 ORTHO05D006190 1.2e-17 94.4 302 28.1
A09p18870 Brassica napus HOM05D004979 ORTHO05D006190 1.5e-17 94.0 270 29.6
BraA09t37507Z Brassica rapa HOM05D004979 ORTHO05D006190 1.5e-17 94.0 270 29.6
FAN23G0202 Fragaria x ananassa HOM05D004979 ORTHO05D006190 2.6e-17 93.2 273 28.9
Glyma.20G116900 Glycine max HOM05D004979 ORTHO05D006190 2.6e-17 93.2 270 28.5
CANSAT56G2810 Cannabis sativa HOM05D004979 ORTHO05D006190 3.4e-17 92.8 270 29.3
Medtr1g110490 Medicago truncatula HOM05D004979 ORTHO05D006190 3.4e-17 92.8 270 29.6
PGR117G0001 Punica granatum HOM05D004979 ORTHO05D006190 3.4e-17 92.8 321 27.4
Lj4g0015757 Lotus japonicus HOM05D004979 ORTHO05D006190 4.5e-17 92.4 270 28.9
BcaC04g22085 Brassica carinata HOM05D004979 ORTHO05D006190 5.8e-17 92.0 270 28.9
C09p23650 Brassica napus HOM05D004979 ORTHO05D006190 5.8e-17 92.0 270 28.9
BolC9t55284H Brassica oleracea HOM05D004979 ORTHO05D006190 5.8e-17 92.0 270 28.9
MD15G1441300 Malus domestica HOM05D004979 ORTHO05D006190 5.8e-17 92.0 270 28.5
PGR004G0062 Punica granatum HOM05D004979 ORTHO05D006190 7.6e-17 91.7 321 27.4
VMungo0720G1588 Vigna mungo HOM05D004979 ORTHO05D006190 7.6e-17 91.7 270 28.5
AUR62014845 Chenopodium quinoa HOM05D004979 ORTHO05D006190 9.9e-17 91.3 263 28.5
Sabra13G0000500 Salix brachista HOM05D004979 ORTHO05D006190 9.9e-17 91.3 283 27.6
arahy.Tifrunner.gnm1.ann1.Q958TZ Arachis hypogaea HOM05D004979 ORTHO05D006190 1.7e-16 90.5 290 27.9
Os05g0144000 Oryza sativa ssp. japonica HOM05D004979 ORTHO05D006190 1.7e-16 90.5 270 28.5
HPP92_023772 Vanilla planifolia HOM05D004979 ORTHO05D006190 1.7e-16 90.5 270 28.5
GSVIVG01006954001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.7e-16 90.5 215 32.1
FAN10G2429 Fragaria x ananassa HOM05D004979 ORTHO05D006190 2.2e-16 90.1 163 36.8
Phvul.007G028500 Phaseolus vulgaris HOM05D004979 ORTHO05D006190 2.2e-16 90.1 270 28.9
SalBow3G2171 Salvia bowleyana HOM05D004979 ORTHO05D006190 2.2e-16 90.1 168 35.1
SHI20228 Sapria himalayana HOM05D004979 ORTHO05D006190 3.8e-16 89.4 68 64.7
arahy.Tifrunner.gnm1.ann1.4I4LKP Arachis hypogaea HOM05D004979 ORTHO05D006190 1.1e-15 87.8 270 28.9
FAN06G2997 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.1e-15 87.8 292 27.1
Psat6g226240 Pisum sativum HOM05D004979 ORTHO05D006190 1.1e-15 87.8 270 28.5
Zm00001eb108680 Zea mays HOM05D004979 ORTHO05D006190 5.4e-15 85.5 270 27.0
Eucgr.I02672 Eucalyptus grandis HOM05D004979 ORTHO05D006190 3.5e-14 82.8 268 25.4
SEGI_04903 Sequoiadendron giganteum HOM05D004979 ORTHO05D006190 6.0e-14 82.0 266 28.2
Nitab4.5_0000081g0190 Nicotiana tabacum HOM05D004979 ORTHO05D006190 1.8e-13 80.5 236 28.4
ATR0730G180 Amborella trichopoda HOM05D004979 ORTHO05D006190 3.0e-13 79.7 217 30.4
MBI07_g39750_MAGBIO Magnolia biondii HOM05D004979 ORTHO05D006190 8.7e-13 78.2 107 46.7
Haze_12430 Corylus avellana HOM05D004979 ORTHO05D006190 1.1e-12 77.8 113 38.9
Cpa.g.sc46.2 Carica papaya HOM05D004979 ORTHO05D006190 1.3e-11 74.3 95 43.2
SGA_v2.0_scaffold279G46769 Striga asiatica HOM05D004979 ORTHO05D006190 1.3e-11 74.3 142 35.2
Pp3c2_38270 Physcomitrium patens HOM05D004979 ORTHO05D006190 1.6e-11 73.9 271 26.2
FAN03G1290 Fragaria x ananassa HOM05D004979 ORTHO05D006190 2.8e-11 73.2 104 37.5
SMO145G0201 Selaginella moellendorffii HOM05D004979 ORTHO05D006190 3.6e-11 72.8 174 31.0
Lj9A238G55 Lonicera japonica HOM05D004979 ORTHO05D006190 4.8e-11 72.4 95 42.1
AUR62017041 Chenopodium quinoa HOM05D004979 ORTHO05D006190 1.4e-10 70.9 91 40.7
Mapoly0050s0014 Marchantia polymorpha HOM05D004979 ORTHO05D006190 2.6e-09 66.6 180 27.2
AagrBONN_evm.TU.Sc2ySwM_344.2018 Anthoceros agrestis HOM05D004979 ORTHO05D006190 1.1e-07 61.2 182 27.5
Actinidia01657 Actinidia chinensis HOM05D004979 ORTHO05D006190 2.4e-07 60.1 89 40.4
DCAR_006591 Daucus carota HOM05D004979 ORTHO05D006190 3.2e-07 59.7 116 37.1
FAN19G1386 Fragaria x ananassa HOM05D004979 ORTHO05D006190 4.2e-07 59.3 127 35.4
Sopen04g025050 Solanum pennellii HOM05D004979 ORTHO05D006190 5.5e-07 58.9 116 36.2
GSVIVG01002014001 Vitis vinifera HOM05D004979 ORTHO05D006190 9.3e-07 58.2 117 35.9
COL.COLO4_28214 Corchorus olitorius HOM05D004979 ORTHO05D006190 6.0e-06 55.5 40 65.0
Hma1.2p1_0759F.1_g213770 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 6.0e-06 55.5 117 35.9
Hma1.2p1_0759F.1_g213813 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 6.0e-06 55.5 117 35.9


User provided reference genes

Program Settings