Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0123400 Rhododendron simsii HOM05D006450 ORTHO05D018518 1.9e-92 342.4 167 100.0
RhsimUnG0208900 Rhododendron simsii HOM05D006450 ORTHO05D001777 6.3e-35 151.4 90 86.7
Lj5g0009850 Lotus japonicus HOM05D000099 ORTHO05D000205 5.5e-31 138.3 72 91.7
LjContig00372g0019379 Lotus japonicus HOM05D000099 ORTHO05D000205 7.2e-31 137.9 78 85.9
CsaV3_3G043820 Cucumis sativus L. HOM05D017952 ORTHO05D018518 4.7e-30 135.2 76 85.5
Sc02g0009600 Simmondsia chinensis HOM05D017952 ORTHO05D018518 2.3e-29 132.9 84 78.6
arahy.Tifrunner.gnm1.ann1.1XYC2X Arachis hypogaea HOM05D000099 ORTHO05D000205 1.5e-28 130.2 74 83.8
Sopen07g009510 Solanum pennellii HOM05D000099 ORTHO05D000205 5.9e-25 118.2 76 76.3
arahy.Tifrunner.gnm1.ann1.TIB4QE Arachis hypogaea HOM05D017952 ORTHO05D018518 3.8e-24 115.5 74 74.3
ScUNg0001010 Simmondsia chinensis HOM05D000099 ORTHO05D000205 5.0e-24 115.2 84 70.2
arahy.Tifrunner.gnm1.ann1.DU894F Arachis hypogaea HOM05D017952 ORTHO05D018518 1.8e-21 106.7 56 89.3
RhsimUnG0208400 Rhododendron simsii HOM05D000099 ORTHO05D000205 9.1e-18 94.4 45 97.8
unitig_548.g34881 Utricularia gibba HOM05D000099 ORTHO05D000205 3.5e-17 92.4 78 62.8
arahy.Tifrunner.gnm1.ann1.00KTF5 Arachis hypogaea HOM05D000099 ORTHO05D000205 6.1e-14 81.6 58 72.4
arahy.Tifrunner.gnm1.ann1.B11B4G Arachis hypogaea HOM05D000099 ORTHO05D000205 6.1e-14 81.6 54 75.9
BNapus_Darmor_BZH_scaffold_107p00190 Brassica napus HOM05D000099 ORTHO05D000205 6.1e-14 81.6 79 57.0
Dinv01605 Davidia involucrata HOM05D000099 ORTHO05D000205 6.1e-14 81.6 106 49.1
Migut.A01237 Erythranthe guttata HOM05D006450 ORTHO05D001777 6.1e-14 81.6 44 86.4
Cpa.g.sc2112.1 Carica papaya HOM05D007851 ORTHO05D007849 1.4e-13 80.5 46 84.8
arahy.Tifrunner.gnm1.ann1.RQ9V2G Arachis hypogaea HOM05D000099 ORTHO05D000205 2.3e-13 79.7 60 66.7
arahy.Tifrunner.gnm1.ann1.XNQ1FA Arachis hypogaea HOM05D000099 ORTHO05D000205 6.7e-13 78.2 57 70.2
A09p30690 Brassica napus HOM05D006450 ORTHO05D001777 5.7e-12 75.1 44 86.4
arahy.Tifrunner.gnm1.ann1.IBA4PL Arachis hypogaea HOM05D006450 ORTHO05D001777 1.3e-11 73.9 42 88.1
A06p25770 Brassica napus HOM05D000099 ORTHO05D000205 2.2e-11 73.2 65 63.1
Medtr0055s0050 Medicago truncatula HOM05D000099 ORTHO05D000205 4.8e-11 72.0 42 81.0
Medtr0055s0140 Medicago truncatula HOM05D000099 ORTHO05D000205 4.8e-11 72.0 42 81.0
unitig_130.g30080 Utricularia gibba HOM05D000099 ORTHO05D000205 1.4e-10 70.5 63 61.9
arahy.Tifrunner.gnm1.ann1.QAT9PU Arachis hypogaea HOM05D000099 ORTHO05D000205 2.4e-10 69.7 54 68.5
A06p23820 Brassica napus HOM05D006450 ORTHO05D001777 3.1e-10 69.3 49 73.5
Rhsim02G0139600 Rhododendron simsii HOM05D000099 ORTHO05D007849 3.5e-09 65.9 34 94.1
arahy.Tifrunner.gnm1.ann1.4EJ54G Arachis hypogaea HOM05D006450 ORTHO05D001777 2.9e-08 62.8 36 83.3
arahy.Tifrunner.gnm1.ann1.59N28G Arachis hypogaea HOM05D006450 ORTHO05D007849 2.9e-08 62.8 36 83.3
arahy.Tifrunner.gnm1.ann1.CY7VGA Arachis hypogaea HOM05D006450 ORTHO05D001777 2.9e-08 62.8 36 83.3
arahy.Tifrunner.gnm1.ann1.DW5R15 Arachis hypogaea HOM05D006450 ORTHO05D007849 2.9e-08 62.8 36 83.3
arahy.Tifrunner.gnm1.ann1.FM2NH1 Arachis hypogaea HOM05D006450 ORTHO05D001777 2.9e-08 62.8 36 83.3
arahy.Tifrunner.gnm1.ann1.IKKG03 Arachis hypogaea HOM05D006450 ORTHO05D001777 2.9e-08 62.8 36 83.3
arahy.Tifrunner.gnm1.ann1.JLZP6T Arachis hypogaea HOM05D006450 ORTHO05D001777 2.9e-08 62.8 36 83.3
arahy.Tifrunner.gnm1.ann1.N4E4FQ Arachis hypogaea HOM05D006450 ORTHO05D001777 2.9e-08 62.8 36 83.3
arahy.Tifrunner.gnm1.ann1.U7NBP2 Arachis hypogaea HOM05D006450 ORTHO05D001777 2.9e-08 62.8 36 83.3
arahy.Tifrunner.gnm1.ann1.Y3V93U Arachis hypogaea HOM05D006450 ORTHO05D001777 2.9e-08 62.8 36 83.3
Manes.S038016 Manihot esculenta HOM05D017952 ORTHO05D250017 2.9e-08 62.8 91 45.1
unitig_143.g32396 Utricularia gibba HOM05D000099 ORTHO05D000205 3.8e-08 62.4 149 32.9
Sc14g0004240 Simmondsia chinensis HOM05D006450 ORTHO05D001777 5.0e-08 62.0 51 64.7
unitig_135.g35490 Utricularia gibba HOM05D000099 ORTHO05D000205 5.0e-08 62.0 71 52.1
arahy.Tifrunner.gnm1.ann1.HX86U3 Arachis hypogaea HOM05D006450 ORTHO05D001777 6.5e-08 61.6 32 90.6
arahy.Tifrunner.gnm1.ann1.VCF5QC Arachis hypogaea HOM05D000099 ORTHO05D000205 6.5e-08 61.6 32 90.6
Duzib250G0002 Durio zibethinus HOM05D000099 ORTHO05D000205 6.5e-08 61.6 37 81.1
A06p25060 Brassica napus HOM05D000099 ORTHO05D000205 8.5e-08 61.2 31 93.5
arahy.Tifrunner.gnm1.ann1.W08C9D Arachis hypogaea HOM05D006450 ORTHO05D001777 1.1e-07 60.8 32 87.5
A05p22240 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-07 60.8 31 90.3
A05p22460 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-07 60.8 33 87.9
A06p23660 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-07 60.8 31 90.3
A06p23720 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-07 60.8 31 90.3
A06p23840 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-07 60.8 31 90.3
A06p24610 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-07 60.8 31 90.3
A06p25420 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-07 60.8 31 90.3
A06p25830 Brassica napus HOM05D000099 ORTHO05D000205 1.1e-07 60.8 33 87.9
A09p30950 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-07 60.8 31 90.3
A09p31260 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-07 60.8 31 90.3
BNapus_Darmor_BZH_scaffold_107p00040 Brassica napus HOM05D000099 ORTHO05D000205 1.1e-07 60.8 33 87.9
BNapus_Darmor_BZH_scaffold_107p00070 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-07 60.8 31 90.3
BNapus_Darmor_BZH_scaffold_107p00140 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-07 60.8 31 90.3
BNapus_Darmor_BZH_scaffold_192p00010 Brassica napus HOM05D006450 ORTHO05D001777 1.1e-07 60.8 31 90.3
arahy.Tifrunner.gnm1.ann1.DBUY86 Arachis hypogaea HOM05D006450 ORTHO05D001777 1.5e-07 60.5 36 80.6
arahy.Tifrunner.gnm1.ann1.PJI1IR Arachis hypogaea HOM05D006450 ORTHO05D001777 1.5e-07 60.5 36 80.6
arahy.Tifrunner.gnm1.ann1.XK9GFX Arachis hypogaea HOM05D006450 ORTHO05D001777 1.5e-07 60.5 80 47.5
CAN.G13509.1 Capsicum annuum HOM05D007851 ORTHO05D007849 1.5e-07 60.5 32 87.5
BNapus_Darmor_BZH_scaffold_107p00290 Brassica napus HOM05D000099 ORTHO05D027623 1.9e-07 60.1 74 51.4
A06p23850 Brassica napus HOM05D006450 ORTHO05D001777 3.2e-07 59.3 31 87.1
A06p24320 Brassica napus HOM05D006450 ORTHO05D001777 3.2e-07 59.3 31 87.1
arahy.Tifrunner.gnm1.ann1.GBJ0Q2 Arachis hypogaea HOM05D006450 ORTHO05D001777 4.2e-07 58.9 36 80.6
arahy.Tifrunner.gnm1.ann1.Y74ICM Arachis hypogaea HOM05D006450 ORTHO05D001777 4.2e-07 58.9 36 80.6
A05p22630 Brassica napus HOM05D000099 ORTHO05D000205 4.2e-07 58.9 33 84.8
A06p23620 Brassica napus HOM05D006450 ORTHO05D001777 4.2e-07 58.9 72 50.0
A06p23730 Brassica napus HOM05D006450 ORTHO05D001777 4.2e-07 58.9 31 87.1
A06p24630 Brassica napus HOM05D006450 ORTHO05D001777 4.2e-07 58.9 31 87.1
A09p31040 Brassica napus HOM05D006450 ORTHO05D001777 5.5e-07 58.5 30 90.0
Sopen00g001720 Solanum pennellii HOM05D000099 ORTHO05D000205 7.2e-07 58.2 28 82.1
unitig_124.g30878 Utricularia gibba HOM05D000099 ORTHO05D000205 7.2e-07 58.2 38 76.3
arahy.Tifrunner.gnm1.ann1.M1SIGC Arachis hypogaea HOM05D006450 ORTHO05D001777 9.4e-07 57.8 118 36.4
A06p25330 Brassica napus HOM05D006450 ORTHO05D001777 9.4e-07 57.8 31 87.1
A07p06160 Brassica napus HOM05D006450 ORTHO05D001777 9.4e-07 57.8 31 87.1
unitig_105.g35515 Utricularia gibba HOM05D000099 ORTHO05D000205 9.4e-07 57.8 38 76.3
unitig_676.g29555 Utricularia gibba HOM05D000099 ORTHO05D000205 9.4e-07 57.8 87 44.8
ECA173G0001 Erigeron canadensis HOM05D000099 ORTHO05D000205 1.2e-06 57.4 51 62.7
Sopen00g002280 Solanum pennellii HOM05D000099 ORTHO05D000205 1.2e-06 57.4 35 77.1
arahy.Tifrunner.gnm1.ann1.6AY1PL Arachis hypogaea HOM05D000099 ORTHO05D000205 2.1e-06 56.6 117 40.2
A06p24560 Brassica napus HOM05D006450 ORTHO05D001777 2.1e-06 56.6 31 87.1
Sc14g0003720 Simmondsia chinensis HOM05D013320 ORTHO05D387512 2.7e-06 56.2 76 46.1
A06p24890 Brassica napus HOM05D006450 ORTHO05D001777 3.6e-06 55.8 31 83.9
CAN.G1991.2 Capsicum annuum HOM05D000099 ORTHO05D000205 4.7e-06 55.5 32 78.1
Sopen11g013200 Solanum pennellii HOM05D000099 ORTHO05D002060 4.7e-06 55.5 53 52.8
A06p24330 Brassica napus HOM05D006450 ORTHO05D001777 6.1e-06 55.1 53 58.5
Lj5g0003833 Lotus japonicus HOM05D007851 ORTHO05D007849 8.0e-06 54.7 82 42.7


User provided reference genes

Program Settings