Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0122900 Rhododendron simsii HOM05D002165 ORTHO05D001531 8.5e-34 146.4 70 100.0
vmacro23432 Vaccinium macrocarpon HOM05D002165 ORTHO05D001531 8.2e-21 103.2 68 77.9
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 5.9e-11 70.5 66 53.0
Rhsim11G0104900 Rhododendron simsii HOM05D002165 ORTHO05D001531 1.0e-10 69.7 65 67.7
CSS0027376 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 1.1e-09 66.2 61 57.4
Lsat_1_v5_gn_9_85041 Lactuca sativa HOM05D002165 ORTHO05D001531 2.7e-08 61.6 54 63.0
MELO3C025021.2 Cucumis melo HOM05D002165 ORTHO05D001531 3.0e-07 58.2 55 58.2
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 5.2e-07 57.4 55 54.5
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 5.2e-07 57.4 55 54.5
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 5.2e-07 57.4 51 60.8
ECA236G1383 Erigeron canadensis HOM05D002165 ORTHO05D001531 5.2e-07 57.4 54 57.4
Eucgr.H01323 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.7e-07 57.0 53 52.8
Sed0026735 Sechium edule HOM05D002165 ORTHO05D001531 8.8e-07 56.6 57 50.9
Dinv30951 Davidia involucrata HOM05D002165 ORTHO05D001531 1.2e-06 56.2 55 61.8
CsaV3_6G002630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 1.5e-06 55.8 58 53.4
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.6e-06 55.1 57 49.1
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.6e-06 55.1 57 49.1
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.6e-06 55.1 57 49.1
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 2.6e-06 55.1 52 59.6
Sed0011742 Sechium edule HOM05D002165 ORTHO05D001531 2.6e-06 55.1 43 60.5
CSS0044388 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 3.3e-06 54.7 63 50.8
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 3.3e-06 54.7 57 50.9
ClCG03G017890 Citrullus lanatus HOM05D002165 ORTHO05D001531 4.4e-06 54.3 39 64.1
MELO3C004151.2 Cucumis melo HOM05D002165 ORTHO05D001531 5.7e-06 53.9 63 50.8
DCAR_001884 Daucus carota HOM05D002165 ORTHO05D001531 5.7e-06 53.9 51 54.9
DCAR_001885 Daucus carota HOM05D002165 ORTHO05D001531 5.7e-06 53.9 53 54.7
BcaC09g47857 Brassica carinata HOM05D002165 ORTHO05D001531 7.5e-06 53.5 64 45.3
BolC1t05659H Brassica oleracea HOM05D002165 ORTHO05D001531 7.5e-06 53.5 64 45.3
BraA01t04469Z Brassica rapa HOM05D002165 ORTHO05D001531 7.5e-06 53.5 64 45.3
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 7.5e-06 53.5 66 43.9
DCAR_002291 Daucus carota HOM05D002165 ORTHO05D001531 7.5e-06 53.5 53 54.7
Solyc01g101260.2 Solanum lycopersicum HOM05D002165 ORTHO05D001531 7.5e-06 53.5 59 47.5
Sopen01g044710 Solanum pennellii HOM05D002165 ORTHO05D001531 7.5e-06 53.5 59 47.5
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 9.7e-06 53.1 66 43.9
ECA240G3242 Erigeron canadensis HOM05D002165 ORTHO05D001531 9.7e-06 53.1 53 49.1
Lsat_1_v5_gn_9_84961 Lactuca sativa HOM05D002165 ORTHO05D001531 9.7e-06 53.1 54 53.7


User provided reference genes

Program Settings