Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0120000 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.7e-97 359.4 192 100.0
Rhsim07G0112400 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.3e-20 104.0 85 65.9
Rhsim11G0144400 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.5e-19 100.5 165 44.2
Rhsim07G0112500 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.6e-18 97.1 92 60.9
Rhsim02G0160600 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.5e-13 79.3 72 55.6
Rhsim08G0115000 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.5e-13 79.3 72 55.6
Rhsim07G0157200 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.3e-12 76.6 72 54.2
CSS0039597 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.9e-12 76.3 127 35.4
CSS0016546 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 3.8e-12 75.9 127 35.4
CSS0037816 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 5.0e-12 75.5 127 34.6
CSS0001939 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 6.6e-12 75.1 127 34.6
CSS0038269 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 6.6e-12 75.1 127 34.6
Oeu036407.1 Olea europaea HOM05D000030 ORTHO05D000009 1.1e-11 74.3 76 53.9
QL93p1872_0051 Quercus lobata HOM05D000030 ORTHO05D000009 1.1e-11 74.3 75 52.0
Oeu008736.1 Olea europaea HOM05D000030 ORTHO05D000009 2.5e-11 73.2 65 56.9
Oeu050025.1 Olea europaea HOM05D000030 ORTHO05D000009 2.5e-11 73.2 65 56.9
CSS0002103 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 5.6e-11 72.0 77 46.8
CSS0023651 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 5.6e-11 72.0 77 46.8
CSS0029242 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 5.6e-11 72.0 77 46.8
CSS0032552 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 5.6e-11 72.0 77 46.8
CSS0034407 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 5.6e-11 72.0 77 46.8
CSS0036842 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 5.6e-11 72.0 83 44.6
CSS0049810 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 5.6e-11 72.0 83 45.8
QL12p011615 Quercus lobata HOM05D000030 ORTHO05D000009 5.6e-11 72.0 86 46.5
CSS0008365 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.3e-11 71.6 83 44.6
CSS0017014 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.3e-11 71.6 83 44.6
CSS0029287 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.3e-11 71.6 83 44.6
CSS0038163 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.3e-11 71.6 83 44.6
CSS0042125 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.3e-11 71.6 83 44.6
CSS0043849 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.3e-11 71.6 83 44.6
CSS0008004 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.6e-10 70.5 83 44.6
CSS0012167 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.6e-10 70.5 83 43.4
CSS0014370 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.1e-10 70.1 83 43.4
Rhsim12G0109500 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.1e-10 70.1 80 48.8
Hma1.2p1_0066F.1_g036660 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.8e-10 69.7 83 42.2
Hma1.2p1_0007F.1_g005280 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.6e-10 69.3 83 42.2
Hma1.2p1_1038F.1_g250720 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.6e-10 69.3 83 42.2
Hma1.2p1_1179F.1_g264470 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.7e-10 68.9 83 42.2
PSO210G2845 Papaver somniferum HOM05D000030 ORTHO05D000009 4.7e-10 68.9 125 36.0
CSS0041907 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 6.1e-10 68.6 115 34.8
Manes.05G008504 Manihot esculenta HOM05D000030 ORTHO05D000009 6.1e-10 68.6 83 45.8
Hma1.2p1_0053F.1_g030970 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.0e-10 68.2 74 45.9
Hma1.2p1_0121F.1_g057500 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.0e-10 68.2 74 45.9
SHI28106 Sapria himalayana HOM05D000030 ORTHO05D000009 8.0e-10 68.2 74 47.3
CANSAT54G2476 Cannabis sativa HOM05D000030 ORTHO05D000009 1.0e-09 67.8 77 45.5
Dinv01288 Davidia involucrata HOM05D000030 ORTHO05D000009 1.0e-09 67.8 83 42.2
Hma1.2p1_1073F.1_g254260 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.0e-09 67.8 83 41.0
Manes.05G090550 Manihot esculenta HOM05D000030 ORTHO05D000009 1.0e-09 67.8 120 32.5
Manes.11G060433 Manihot esculenta HOM05D000030 ORTHO05D000009 1.0e-09 67.8 83 44.6
Manes.11G060450 Manihot esculenta HOM05D000030 ORTHO05D000009 1.0e-09 67.8 83 44.6
Manes.16G030901 Manihot esculenta HOM05D000030 ORTHO05D000009 1.0e-09 67.8 83 44.6
PSO801G0167 Papaver somniferum HOM05D000030 ORTHO05D000009 1.0e-09 67.8 131 35.1
Hma1.2p1_0769F.1_g215780 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.4e-09 67.4 83 41.0
Manes.08G065225 Manihot esculenta HOM05D000030 ORTHO05D000009 1.4e-09 67.4 78 47.4
QL04p060971 Quercus lobata HOM05D000030 ORTHO05D000009 1.4e-09 67.4 81 45.7
Rhsim13G0135100 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.4e-09 67.4 62 54.8
Hma1.2p1_0982F.1_g243880 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.8e-09 67.0 81 43.2
Hma1.2p1_1030F.1_g249810 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.8e-09 67.0 81 43.2
Hma1.2p1_2759F.1_g328050 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.8e-09 67.0 83 41.0
Peaxi162Scf00897g00411 Petunia axillaris HOM05D000030 ORTHO05D000009 1.8e-09 67.0 83 43.4
Hma1.2p1_0195F.1_g084610 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.3e-09 66.6 83 39.8
Hma1.2p1_1862F.1_g305730 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.3e-09 66.6 74 44.6
Oeu036139.1 Olea europaea HOM05D000030 ORTHO05D000009 2.3e-09 66.6 83 47.0
Rhsim01G0156000 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.3e-09 66.6 80 45.0
TWI15G0529 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 2.3e-09 66.6 77 42.9
PSO832G1676 Papaver somniferum HOM05D000030 ORTHO05D000009 4.0e-09 65.9 131 34.4
Hma1.2p1_0784F.1_g217220 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 5.2e-09 65.5 83 38.6
Manes.03G052916 Manihot esculenta HOM05D000030 ORTHO05D000009 5.2e-09 65.5 83 43.4
PSO541G2524 Papaver somniferum HOM05D000030 ORTHO05D000009 5.2e-09 65.5 83 45.8
Hma1.2p1_1415F.1_g281990 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.8e-09 65.1 83 39.8
Manes.03G114216 Manihot esculenta HOM05D000030 ORTHO05D000009 6.8e-09 65.1 83 42.2
Oeu000293.1 Olea europaea HOM05D000030 ORTHO05D000009 6.8e-09 65.1 83 45.8
Oeu036151.1 Olea europaea HOM05D000030 ORTHO05D000009 6.8e-09 65.1 83 45.8
PSO210G5102 Papaver somniferum HOM05D000030 ORTHO05D000009 6.8e-09 65.1 83 44.6
TPR.G31112 Trifolium pratense HOM05D000030 ORTHO05D000031 6.8e-09 65.1 70 42.9
TWI56G0009 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 6.8e-09 65.1 65 52.3
Hma1.2p1_1409F.1_g281640 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.9e-09 64.7 68 42.6
Atru.chr11.261 Acer truncatum HOM05D000030 ORTHO05D000009 1.2e-08 64.3 83 43.4
Manes.05G070350 Manihot esculenta HOM05D000030 ORTHO05D000009 1.2e-08 64.3 83 43.4
Hma1.2p1_0390F.1_g142670 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.0e-08 63.5 64 45.3
Atru.chr13.1244 Acer truncatum HOM05D000030 ORTHO05D000009 2.6e-08 63.2 74 47.3
Manes.11G130116 Manihot esculenta HOM05D000030 ORTHO05D000009 2.6e-08 63.2 64 50.0
Rhsim05G0179900 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.6e-08 63.2 83 41.0
Rhsim08G0142200 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.4e-08 62.4 77 41.6
ECA236G4376 Erigeron canadensis HOM05D000030 ORTHO05D000009 5.8e-08 62.0 78 41.0
Oeu046279.1 Olea europaea HOM05D000030 ORTHO05D000009 5.8e-08 62.0 65 47.7
Oeu056385.1 Olea europaea HOM05D000030 ORTHO05D000009 5.8e-08 62.0 65 49.2
QL02p003957 Quercus lobata HOM05D000030 ORTHO05D000009 5.8e-08 62.0 83 42.2
Rhsim03G0195100 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.8e-08 62.0 83 41.0
Rhsim05G0117900 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.8e-08 62.0 74 48.6
Rhsim10G0144300 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.8e-08 62.0 74 45.9
SHI24332 Sapria himalayana HOM05D000030 ORTHO05D000009 5.8e-08 62.0 106 33.0
Atru.chr3.2216 Acer truncatum HOM05D000030 ORTHO05D000009 7.5e-08 61.6 168 28.0
Oeu063300.1 Olea europaea HOM05D000030 ORTHO05D000009 7.5e-08 61.6 65 49.2
Rhsim09G0060600 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.5e-08 61.6 83 39.8
Atru.chr3.2210 Acer truncatum HOM05D000030 ORTHO05D000009 9.8e-08 61.2 168 27.4
Atru.chr3.2674 Acer truncatum HOM05D000030 ORTHO05D000009 9.8e-08 61.2 68 41.2
Hma1.2p1_1440F.1_g283540 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 9.8e-08 61.2 83 37.3
Rhsim04G0149600 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.8e-08 61.2 109 34.9
Rhsim05G0120200 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.8e-08 61.2 83 39.8
Ciclev10013840m.g Citrus clementina HOM05D000030 ORTHO05D000009 1.3e-07 60.8 106 30.2
Oeu018261.1 Olea europaea HOM05D000030 ORTHO05D000009 1.3e-07 60.8 83 43.4
PSO478G1203 Papaver somniferum HOM05D000030 ORTHO05D000009 1.3e-07 60.8 84 40.5
TWI34G1611 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 1.3e-07 60.8 83 43.4
PSO478G0147 Papaver somniferum HOM05D000030 ORTHO05D000009 1.7e-07 60.5 83 42.2
PSO761G0699 Papaver somniferum HOM05D000030 ORTHO05D000009 1.7e-07 60.5 83 42.2
Psat0s3213g0080 Pisum sativum HOM05D000030 ORTHO05D000009 1.7e-07 60.5 62 45.2
Rhsim08G0084900 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.7e-07 60.5 83 38.6
Rhsim12G0088800 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.7e-07 60.5 83 38.6
Hund01580 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.7e-07 60.5 78 38.5
Hma1.2p1_0649F.1_g195320 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.2e-07 60.1 64 42.2
Medtr4g036325 Medicago truncatula HOM05D000030 ORTHO05D000009 2.2e-07 60.1 64 45.3
Oeu029023.1 Olea europaea HOM05D000030 ORTHO05D000009 2.2e-07 60.1 83 44.6
SHI16671 Sapria himalayana HOM05D000030 ORTHO05D000009 2.2e-07 60.1 68 50.0
Hma1.2p1_1862F.1_g305720 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.9e-07 59.7 64 42.2
Rhsim03G0207300 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.9e-07 59.7 83 38.6
Rhsim13G0141600 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.9e-07 59.7 55 54.5
Psat2g049800 Pisum sativum HOM05D000030 ORTHO05D000009 3.7e-07 59.3 77 36.4
Rhsim02G0181600 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.7e-07 59.3 77 41.6
Rhsim03G0115700 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.7e-07 59.3 61 52.5
SHI00019 Sapria himalayana HOM05D006492 ORTHO05D000009 3.7e-07 59.3 68 48.5
SHI15349 Sapria himalayana HOM05D000030 ORTHO05D000009 3.7e-07 59.3 68 48.5
SHI16025 Sapria himalayana HOM05D000030 ORTHO05D000009 3.7e-07 59.3 68 48.5
SHI25980 Sapria himalayana HOM05D000030 ORTHO05D000009 3.7e-07 59.3 74 44.6
SHI29630 Sapria himalayana HOM05D000030 ORTHO05D000009 3.7e-07 59.3 68 48.5
CAN.G244.2 Capsicum annuum HOM05D000030 ORTHO05D000009 4.9e-07 58.9 114 32.5
AUR62027943 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.9e-07 58.9 81 38.3
Oeu020179.1 Olea europaea HOM05D000030 ORTHO05D000009 6.4e-07 58.5 76 47.4
Rhsim06G0015900 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.4e-07 58.5 65 44.6
Rhsim10G0125900 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.4e-07 58.5 83 38.6
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 6.4e-07 58.5 76 43.4
SHI11118 Sapria himalayana HOM05D000030 ORTHO05D000009 6.4e-07 58.5 127 33.1
SHI29038 Sapria himalayana HOM05D000030 ORTHO05D000009 6.4e-07 58.5 73 46.6
SHI32619 Sapria himalayana HOM05D000030 ORTHO05D000009 6.4e-07 58.5 62 45.2
Atru.chr12.2161 Acer truncatum HOM05D000030 ORTHO05D000009 8.3e-07 58.2 64 46.9
SHI13038 Sapria himalayana HOM05D000105 ORTHO05D000009 8.3e-07 58.2 112 35.7
Atru.chr12.1411 Acer truncatum HOM05D000268 ORTHO05D000261 1.1e-06 57.8 59 45.8
CANSAT01G1043 Cannabis sativa HOM05D000030 ORTHO05D000009 1.1e-06 57.8 72 40.3
Lj1g0017047 Lotus japonicus HOM05D000030 ORTHO05D000009 1.1e-06 57.8 85 35.3
SHI08368 Sapria himalayana HOM05D000030 ORTHO05D000009 1.1e-06 57.8 68 48.5
SHI27022 Sapria himalayana HOM05D000030 ORTHO05D000009 1.1e-06 57.8 68 47.1
SHI44564 Sapria himalayana HOM05D000030 ORTHO05D000009 1.1e-06 57.8 68 47.1
AUR62023658 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.4e-06 57.4 117 29.9
PSO135G0777 Papaver somniferum HOM05D000030 ORTHO05D000009 1.4e-06 57.4 81 40.7
Rhsim08G0166400 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.4e-06 57.4 83 37.3
Os02g0521366 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 1.9e-06 57.0 77 36.4
Os10g0443400 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 1.9e-06 57.0 77 36.4
SHI07285 Sapria himalayana HOM05D000030 ORTHO05D000009 1.9e-06 57.0 68 45.6
SHI14389 Sapria himalayana HOM05D000030 ORTHO05D000009 1.9e-06 57.0 68 47.1
SHI33392 Sapria himalayana HOM05D000030 ORTHO05D000009 1.9e-06 57.0 68 47.1
Atru.chr9.286 Acer truncatum HOM05D000030 ORTHO05D000009 2.4e-06 56.6 114 28.9
AUR62037889 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.4e-06 56.6 117 29.9
PSO067G0052 Papaver somniferum HOM05D000030 ORTHO05D000009 2.4e-06 56.6 77 42.9
Rhsim05G0140000 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.4e-06 56.6 64 42.2
SHI18590 Sapria himalayana HOM05D000030 ORTHO05D000009 2.4e-06 56.6 67 47.8
AUR62027940 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.2e-06 56.2 117 29.9
AUR62044584 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.2e-06 56.2 117 29.9
PSO478G3458 Papaver somniferum HOM05D000030 ORTHO05D000009 3.2e-06 56.2 64 46.9
SHI02306 Sapria himalayana HOM05D000030 ORTHO05D000009 3.2e-06 56.2 64 50.0
SHI15328 Sapria himalayana HOM05D000030 ORTHO05D000009 3.2e-06 56.2 68 47.1
CANSAT64G2844 Cannabis sativa HOM05D000030 ORTHO05D000023 4.1e-06 55.8 72 40.3
Oeu009987.2 Olea europaea HOM05D000030 ORTHO05D000009 4.1e-06 55.8 65 46.2
SHI09578 Sapria himalayana HOM05D000030 ORTHO05D000009 4.1e-06 55.8 68 45.6
Duzib235G1281 Durio zibethinus HOM05D000030 ORTHO05D000009 5.4e-06 55.5 83 37.3
SHI19810 Sapria himalayana HOM05D000030 ORTHO05D000009 5.4e-06 55.5 68 47.1
Hund10962 Selenicereus undatus HOM05D000030 ORTHO05D000009 5.4e-06 55.5 78 38.5
Atru.chr12.1941 Acer truncatum HOM05D000030 ORTHO05D000009 7.0e-06 55.1 76 39.5
Manes.17G010201 Manihot esculenta HOM05D000030 ORTHO05D000009 7.0e-06 55.1 63 47.6
Oeu057693.1 Olea europaea HOM05D000030 ORTHO05D000009 7.0e-06 55.1 63 47.6
Os07g0525300 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 7.0e-06 55.1 77 35.1
PSO675G2294 Papaver somniferum HOM05D000030 ORTHO05D000009 7.0e-06 55.1 83 41.0
SHI24061 Sapria himalayana HOM05D000030 ORTHO05D000009 7.0e-06 55.1 67 46.3
SHI32423 Sapria himalayana HOM05D000030 ORTHO05D000009 7.0e-06 55.1 68 45.6
Hund01835 Selenicereus undatus HOM05D000030 ORTHO05D000009 7.0e-06 55.1 75 38.7
SGA_v2.0_scaffold38G15081 Striga asiatica HOM05D000030 ORTHO05D000009 7.0e-06 55.1 60 41.7
Atru.chr2.2577 Acer truncatum HOM05D000030 ORTHO05D000009 9.2e-06 54.7 76 39.5
Atru.chr4.1060 Acer truncatum HOM05D000030 ORTHO05D000009 9.2e-06 54.7 76 32.9
Rhsim11G0121600 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.2e-06 54.7 64 39.1
SHI15090 Sapria himalayana HOM05D000030 ORTHO05D000009 9.2e-06 54.7 74 40.5


User provided reference genes

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