Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0119300 Rhododendron simsii HOM05D019892 ORTHO05D023103 7.1e-186 654.1 399 100.0
Rhsim01G0064900 Rhododendron simsii HOM05D019892 ORTHO05D023103 8.1e-65 251.9 148 87.2
Rhsim04G0177200 Rhododendron simsii HOM05D019892 ORTHO05D023103 1.2e-47 194.9 112 89.3
Rhsim11G0004900 Rhododendron simsii HOM05D019892 ORTHO05D023103 5.5e-29 132.9 157 60.5
vmacro22341 Vaccinium macrocarpon HOM05D019892 ORTHO05D023103 2.5e-21 107.5 144 44.4
Rhsim01G0178700 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.3e-17 95.1 126 47.6
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.8e-17 93.2 127 43.3
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.8e-17 93.2 127 43.3
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.8e-17 93.2 127 43.3
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.8e-17 93.2 127 43.3
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.3e-17 92.8 127 43.3
Rhsim03G0023700 Rhododendron simsii HOM05D001309 ORTHO05D020353 8.3e-17 92.4 130 47.7
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-16 92.0 141 42.6
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.4e-16 91.7 127 41.7
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.4e-16 91.7 127 41.7
Rhsim04G0054800 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.8e-16 91.3 141 41.8
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.4e-16 89.7 127 42.5
CSS0036507 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.7e-15 85.9 113 45.1
CSS0031187 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.6e-12 77.0 127 38.6
Rhsim11G0033100 Rhododendron simsii HOM05D008336 ORTHO05D011831 9.8e-10 68.9 99 40.4
Rhsim07G0152100 Rhododendron simsii HOM05D007798 ORTHO05D023239 1.7e-09 68.2 71 56.3
Rhsim01G0051400 Rhododendron simsii HOM05D007798 ORTHO05D023239 2.8e-09 67.4 71 54.9
Rhsim02G0147600 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.3e-09 66.2 88 50.0
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-08 65.1 88 48.9
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-08 65.1 88 48.9
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-08 65.1 88 48.9
Rhsim03G0184000 Rhododendron simsii HOM05D000683 ORTHO05D000507 2.4e-08 64.3 82 43.9
Rhsim09G0076000 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.4e-08 63.2 78 48.7
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.4e-08 63.2 78 48.7
Rhsim06G0086000 Rhododendron simsii HOM05D007798 ORTHO05D023239 3.5e-07 60.5 80 50.0
Cfa017753 Carpinus fangiana HOM05D020682 ORTHO05D020353 8.6e-06 55.8 83 36.1
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.6e-06 55.8 76 44.7


User provided reference genes

Program Settings