Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0118600 Rhododendron simsii HOM05D007004 ORTHO05D009040 2.6e-52 208.4 100 100.0
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 2.1e-09 65.9 35 91.4
Lj4g0009262 Lotus japonicus HOM05D007004 ORTHO05D009040 2.3e-08 62.4 53 60.4
TAR381G0113 Trochodendron aralioides HOM05D007004 ORTHO05D009040 3.9e-08 61.6 52 59.6
Dinv19362 Davidia involucrata HOM05D007004 ORTHO05D009040 5.1e-08 61.2 37 78.4
CSS0010890 Camellia sinensis var. sinensis HOM05D007004 ORTHO05D009040 6.7e-08 60.8 34 82.4
CSS0040164 Camellia sinensis var. sinensis HOM05D007004 ORTHO05D009040 6.7e-08 60.8 34 82.4
Lj6g0017555 Lotus japonicus HOM05D007004 ORTHO05D009040 6.7e-08 60.8 52 59.6
Aqoxy5G02274 Aquilegia oxysepala HOM05D007004 ORTHO05D009040 1.9e-07 59.3 33 84.8
Cpa.g.sc113.65 Carica papaya HOM05D007004 ORTHO05D009040 1.9e-07 59.3 52 57.7
RcHm_v2.0_Chr7g0222531 Rosa chinensis HOM05D007004 ORTHO05D009040 3.3e-07 58.5 33 78.8
CiPaw.06G147800 Carya illinoinensis HOM05D007004 ORTHO05D009040 5.7e-07 57.8 51 54.9
TPR.G32882 Trifolium pratense HOM05D007004 ORTHO05D009040 9.6e-07 57.0 68 48.5
Haze_01664 Corylus avellana HOM05D007004 ORTHO05D009040 1.6e-06 56.2 52 55.8
Glyma.15G047400 Glycine max HOM05D007004 ORTHO05D009040 1.6e-06 56.2 52 53.8
Manes.10G129800 Manihot esculenta HOM05D007004 ORTHO05D009040 1.6e-06 56.2 52 55.8
Psat5g246720 Pisum sativum HOM05D007004 ORTHO05D009040 1.6e-06 56.2 34 73.5
FAN13G2493 Fragaria x ananassa HOM05D007004 ORTHO05D009040 2.1e-06 55.8 51 56.9
Glyma.08G185300 Glycine max HOM05D007004 ORTHO05D009040 2.1e-06 55.8 52 53.8
GSVIVG01022970001 Vitis vinifera HOM05D007004 ORTHO05D009040 2.8e-06 55.5 34 76.5
Cfa005527 Carpinus fangiana HOM05D000082 ORTHO05D000038 3.7e-06 55.1 52 53.8
FvH4_5g29570 Fragaria vesca HOM05D007004 ORTHO05D009040 3.7e-06 55.1 33 72.7
FAN18G0881 Fragaria x ananassa HOM05D007004 ORTHO05D009040 3.7e-06 55.1 33 72.7
Prupe.1G567600 Prunus persica HOM05D007004 ORTHO05D009040 3.7e-06 55.1 51 54.9
MD15G1422300 Malus domestica HOM05D007004 ORTHO05D009040 4.8e-06 54.7 33 75.8
ClCG09G014330 Citrullus lanatus HOM05D007004 ORTHO05D009040 6.2e-06 54.3 51 51.0
Ciclev10001765m.g Citrus clementina HOM05D007004 ORTHO05D009040 6.2e-06 54.3 33 66.7
FAN04G2477 Fragaria x ananassa HOM05D007004 ORTHO05D009040 8.2e-06 53.9 33 69.7
PSO210G5267 Papaver somniferum HOM05D007004 ORTHO05D009040 8.2e-06 53.9 52 53.8
Potri.003G019500 Populus trichocarpa HOM05D007004 ORTHO05D009040 8.2e-06 53.9 52 51.9
Sabra03G0011000 Salix brachista HOM05D007004 ORTHO05D009040 8.2e-06 53.9 52 51.9


User provided reference genes

Program Settings