Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0114700 Rhododendron simsii HOM05D000412 ORTHO05D000429 7.5e-147 523.9 268 100.0
CSS0027998 Camellia sinensis var. sinensis HOM05D000412 ORTHO05D000429 2.1e-88 329.7 241 72.6
Actinidia26170 Actinidia chinensis HOM05D000412 ORTHO05D000429 1.0e-63 247.7 233 60.5
GSVIVG01023248001 Vitis vinifera HOM05D000412 ORTHO05D000429 4.5e-59 232.3 244 56.1
TAR381G0966 Trochodendron aralioides HOM05D000412 ORTHO05D000429 2.2e-53 213.4 257 51.8
Actinidia01606 Actinidia chinensis HOM05D000412 ORTHO05D000429 7.7e-51 204.9 241 53.1
PGSC0003DMG400024891 Solanum tuberosum HOM05D000412 ORTHO05D000429 1.9e-49 200.3 244 50.4
Hma1.2p1_0884F.1_g232480 Hydrangea macrophylla HOM05D000412 ORTHO05D000429 3.2e-49 199.5 237 51.5
CAN.G855.5 Capsicum annuum HOM05D000412 ORTHO05D000429 7.2e-49 198.4 245 49.8
RcHm_v2.0_Chr7g0224861 Rosa chinensis HOM05D000412 ORTHO05D000429 1.2e-48 197.6 250 49.6
FAN04G0677 Fragaria x ananassa HOM05D000412 ORTHO05D000429 6.7e-47 191.8 247 49.0
FAN18G2866 Fragaria x ananassa HOM05D000412 ORTHO05D000429 1.1e-46 191.0 247 48.6
Nitab4.5_0009637g0020 Nicotiana tabacum HOM05D000412 ORTHO05D000429 1.1e-46 191.0 244 49.2
MD08G1241700 Malus domestica HOM05D000412 ORTHO05D000429 3.3e-46 189.5 212 51.9
FAN08G3215 Fragaria x ananassa HOM05D000412 ORTHO05D000429 4.4e-46 189.1 252 48.8
FAN13G2933 Fragaria x ananassa HOM05D000412 ORTHO05D000429 9.7e-46 188.0 219 52.5
QL02p100445 Quercus lobata HOM05D000412 ORTHO05D000429 2.2e-45 186.8 247 48.2
CiPaw.05G004700 Carya illinoinensis HOM05D000412 ORTHO05D000429 3.7e-45 186.0 250 48.0
Lj5A266T85 Lonicera japonica HOM05D000412 ORTHO05D000429 1.1e-44 184.5 231 48.1
Nitab4.5_0000787g0170 Nicotiana tabacum HOM05D000412 ORTHO05D000429 3.1e-44 183.0 234 49.6
Atru.chr6.498 Acer truncatum HOM05D000412 ORTHO05D000429 4.5e-43 179.1 179 55.3
Peaxi162Scf00011g01221 Petunia axillaris HOM05D000412 ORTHO05D000429 5.9e-43 178.7 204 50.0
Ciclev10000713m.g Citrus clementina HOM05D000412 ORTHO05D000429 7.7e-43 178.3 271 44.6
MD15G1435500 Malus domestica HOM05D000412 ORTHO05D000429 1.0e-42 177.9 223 48.4
Solyc01g103540.3 Solanum lycopersicum HOM05D000412 ORTHO05D000429 5.0e-42 175.6 244 48.4
Thecc.02G018400 Theobroma cacao HOM05D000412 ORTHO05D000429 5.5e-41 172.2 250 46.4
Manes.07G024100 Manihot esculenta HOM05D000412 ORTHO05D000429 9.4e-41 171.4 242 46.3
Dinv07483 Davidia involucrata HOM05D000412 ORTHO05D000429 6.1e-40 168.7 250 48.8
Cc02_g23190 Coffea canephora HOM05D000412 ORTHO05D000429 6.7e-39 165.2 251 43.0
SalBow3G2257 Salvia bowleyana HOM05D000412 ORTHO05D000429 2.6e-38 163.3 247 42.9
COL.COLO4_17722 Corchorus olitorius HOM05D000412 ORTHO05D000429 7.4e-38 161.8 202 52.0
Gohir.D02G236800 Gossypium hirsutum HOM05D000412 ORTHO05D000429 4.1e-36 156.0 206 50.5
Gorai.005G265300 Gossypium raimondii HOM05D000412 ORTHO05D000429 5.3e-36 155.6 206 50.5
CANSAT54G1620 Cannabis sativa HOM05D000412 ORTHO05D000429 9.1e-36 154.8 248 43.1
Gohir.A03G215300 Gossypium hirsutum HOM05D000412 ORTHO05D000429 2.0e-35 153.7 206 50.0
Potri.003G008400 Populus trichocarpa HOM05D000412 ORTHO05D000429 1.7e-34 150.6 200 48.5
Nn5g27427 Nelumbo nucifera HOM05D000412 ORTHO05D000429 2.9e-34 149.8 254 44.1
Potri.004G223800 Populus trichocarpa HOM05D000412 ORTHO05D000429 1.6e-32 144.1 205 45.4
MSTRG.20322 Avicennia marina HOM05D000412 ORTHO05D000429 8.0e-32 141.7 228 43.0
Prupe.1G579100 Prunus persica HOM05D000412 ORTHO05D000429 8.0e-32 141.7 213 43.2
FvH4_5g30420 Fragaria vesca HOM05D000412 ORTHO05D000429 1.8e-31 140.6 247 42.1
AUR62028252 Chenopodium quinoa HOM05D000412 ORTHO05D000429 2.3e-31 140.2 214 40.7
Hund15456 Selenicereus undatus HOM05D000412 ORTHO05D000429 5.2e-31 139.0 209 40.2
Oeu064600.3 Olea europaea HOM05D000412 ORTHO05D000429 4.4e-30 136.0 258 38.0
Dinv19415 Davidia involucrata HOM05D000412 ORTHO05D000429 7.5e-30 135.2 112 64.3
Duzib132G0997 Durio zibethinus HOM05D000412 ORTHO05D000429 7.5e-30 135.2 167 52.1
Migut.B00769 Erythranthe guttata HOM05D000412 ORTHO05D000429 2.2e-29 133.7 242 40.1
EL10Ac8g20567 Beta vulgaris HOM05D000412 ORTHO05D000429 4.1e-28 129.4 244 37.7
HanXRQChr10g0294551 Helianthus annuus HOM05D000412 ORTHO05D000429 5.3e-28 129.0 241 41.5
CiPaw.06G173700 Carya illinoinensis HOM05D000412 ORTHO05D000429 5.9e-27 125.6 251 41.4
ECA234G1418 Erigeron canadensis HOM05D000412 ORTHO05D000429 7.7e-27 125.2 215 38.6
GSVIVG01034843001 Vitis vinifera HOM05D000412 ORTHO05D000429 2.9e-26 123.2 137 51.8
SGA_v2.0_scaffold304G47922 Striga asiatica HOM05D000412 ORTHO05D000429 4.2e-25 119.4 209 37.8
Duzib052G0180 Durio zibethinus HOM05D000412 ORTHO05D000429 3.6e-24 116.3 203 40.4
MSTRG.5209 Avicennia marina HOM05D000412 ORTHO05D000429 2.3e-23 113.6 204 43.1
Haze_10043 Corylus avellana HOM05D000412 ORTHO05D000429 7.5e-22 108.6 140 45.7
Sopen01g045890 Solanum pennellii HOM05D000412 ORTHO05D000429 1.7e-21 107.5 128 46.9
MBI06_g04185_MAGBIO Magnolia biondii HOM05D000412 ORTHO05D000429 4.8e-21 105.9 272 34.9
Lsat_1_v5_gn_5_103901 Lactuca sativa HOM05D000412 ORTHO05D000429 7.0e-20 102.1 216 35.2
AUR62032472 Chenopodium quinoa HOM05D000412 ORTHO05D000429 9.1e-20 101.7 148 40.5
Nn1g09870 Nelumbo nucifera HOM05D000412 ORTHO05D000429 9.1e-20 101.7 296 35.1
Aqoxy1G01355 Aquilegia oxysepala HOM05D000412 ORTHO05D000429 2.0e-19 100.5 280 31.8
SGA_v2.0_scaffold100G29537 Striga asiatica HOM05D000412 ORTHO05D000429 2.0e-19 100.5 192 36.5
TAR624G0667 Trochodendron aralioides HOM05D000412 ORTHO05D000429 2.3e-18 97.1 206 37.4
TAR626G0031 Trochodendron aralioides HOM05D000412 ORTHO05D000429 2.3e-18 97.1 168 41.1
MBI07_g10926_MAGBIO Magnolia biondii HOM05D000412 ORTHO05D000429 3.8e-18 96.3 286 32.2
ATR0737G129 Amborella trichopoda HOM05D000412 ORTHO05D000429 6.6e-18 95.5 245 36.7
PSO675G6246 Papaver somniferum HOM05D000412 ORTHO05D000429 7.2e-17 92.0 269 34.9
PSO541G0192 Papaver somniferum HOM05D000412 ORTHO05D000429 2.1e-16 90.5 226 35.8
Potri.008G080800 Populus trichocarpa HOM05D000412 ORTHO05D000429 2.8e-16 90.1 238 37.8
Sabra08G0060100 Salix brachista HOM05D000412 ORTHO05D000429 4.7e-16 89.4 282 34.4
Lsat_1_v5_gn_9_120180 Lactuca sativa HOM05D000412 ORTHO05D000429 4.0e-15 86.3 207 33.8
SEGI_19777 Sequoiadendron giganteum HOM05D000412 ORTHO05D000429 1.5e-14 84.3 215 35.8
QL04p095998 Quercus lobata HOM05D000412 ORTHO05D000429 3.7e-13 79.7 155 40.0
Cfa004486 Carpinus fangiana HOM05D000412 ORTHO05D043747 6.3e-13 79.0 96 51.0
Cfa017772 Carpinus fangiana HOM05D000412 ORTHO05D000429 6.3e-13 79.0 188 36.7
Haze_18465 Corylus avellana HOM05D000412 ORTHO05D000429 8.3e-13 78.6 252 30.6
CiPaw.15G111400 Carya illinoinensis HOM05D000412 ORTHO05D000429 2.4e-12 77.0 185 36.2
CDE10G0360 Ceratophyllum demersum HOM05D000412 ORTHO05D000429 1.7e-10 70.9 267 32.2
HanXRQChr03g0067841 Helianthus annuus HOM05D000412 ORTHO05D000429 2.9e-10 70.1 243 30.9
Ah.02g128300 Amaranthus hybridus HOM05D000455 ORTHO05D000434 3.9e-10 69.7 188 31.9
Sabra10G0135200 Salix brachista HOM05D000412 ORTHO05D000429 3.9e-10 69.7 233 35.2
Manes.16G048600 Manihot esculenta HOM05D000412 ORTHO05D000429 6.6e-10 68.9 248 33.9
GSVIVG01036696001 Vitis vinifera HOM05D000412 ORTHO05D000429 7.3e-09 65.5 231 32.9
VMungo1080G0511 Vigna mungo HOM05D000412 ORTHO05D000429 2.8e-08 63.5 226 28.8
Lj3g0025295 Lotus japonicus HOM05D000412 ORTHO05D000429 8.0e-08 62.0 243 30.0
DCAR_029180 Daucus carota HOM05D000412 ORTHO05D000429 5.2e-07 59.3 144 37.5
PSO170G0391 Papaver somniferum HOM05D000412 ORTHO05D000429 5.2e-07 59.3 133 30.1
RcHm_v2.0_Chr5g0023021 Rosa chinensis HOM05D000412 ORTHO05D000429 6.8e-07 58.9 272 28.7
TPR.G3608 Trifolium pratense HOM05D000412 ORTHO05D000429 1.2e-06 58.2 184 32.6
Phvul.005G045600 Phaseolus vulgaris HOM05D000412 ORTHO05D000429 4.4e-06 56.2 227 27.3
Glyma.15G265400 Glycine max HOM05D000412 ORTHO05D000429 7.5e-06 55.5 219 28.3
SEGI_07543 Sequoiadendron giganteum HOM05D000412 ORTHO05D000429 7.5e-06 55.5 101 34.7
Zm00001eb156740 Zea mays HOM05D000412 ORTHO05D000429 9.8e-06 55.1 271 26.2


User provided reference genes

Program Settings