Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0099500 Rhododendron simsii HOM05D007794 ORTHO05D009810 2.7e-117 425.2 203 100.0
Rhsim05G0099400 Rhododendron simsii HOM05D007794 ORTHO05D009810 2.3e-71 272.7 320 50.9
Rhsim05G0099600 Rhododendron simsii HOM05D007794 ORTHO05D009810 4.3e-70 268.5 279 55.9
vmacro00480 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 2.8e-37 159.5 324 38.3
Rhsim05G0099000 Rhododendron simsii HOM05D007794 ORTHO05D009810 8.7e-31 137.9 340 32.9
Rhsim05G0099100 Rhododendron simsii HOM05D007794 ORTHO05D009810 2.5e-30 136.3 219 43.8
Actinidia28021 Actinidia chinensis HOM05D007794 ORTHO05D009810 4.2e-25 119.0 345 30.1
vmacro19603 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 1.8e-23 113.6 280 34.3
Hma1.2p1_0908F.1_g235600 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 5.9e-19 98.6 315 28.9
Solyc01g106530.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 5.9e-19 98.6 286 29.7
Hma1.2p1_0908F.1_g235590 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 1.3e-18 97.4 316 27.8
Rhsim05G0098900 Rhododendron simsii HOM05D007794 ORTHO05D009810 5.0e-18 95.5 60 81.7
Rhsim05G0111900 Rhododendron simsii HOM05D008700 ORTHO05D010645 9.4e-17 91.3 50 90.0
Manes.10G095300 Manihot esculenta HOM05D007794 ORTHO05D009810 3.6e-16 89.4 311 28.0
Nitab4.5_0002750g0020 Nicotiana tabacum HOM05D007794 ORTHO05D009810 5.1e-15 85.5 319 27.3
Nitab4.5_0000935g0170 Nicotiana tabacum HOM05D007794 ORTHO05D009810 6.7e-15 85.1 316 27.8
Prupe.8G073600 Prunus persica HOM05D007794 ORTHO05D009810 7.4e-14 81.6 301 25.6
Peaxi162Scf00016g03335 Petunia axillaris HOM05D007794 ORTHO05D009810 2.2e-13 80.1 60 65.0
QL09p046398 Quercus lobata HOM05D007794 ORTHO05D009810 2.2e-13 80.1 62 64.5
Glyma.08G066300 Glycine max HOM05D007794 ORTHO05D009810 6.3e-13 78.6 63 57.1
Peaxi162Scf00152g00085 Petunia axillaris HOM05D007794 ORTHO05D009810 6.3e-13 78.6 60 65.0
Ciclev10030054m.g Citrus clementina HOM05D007794 ORTHO05D009810 1.4e-12 77.4 62 62.9
Oeu059895.1 Olea europaea HOM05D007794 ORTHO05D009810 2.4e-12 76.6 59 66.1
PGSC0003DMG400005122 Solanum tuberosum HOM05D007794 ORTHO05D009810 2.4e-12 76.6 102 45.1
Ciclev10030159m.g Citrus clementina HOM05D007794 ORTHO05D009810 3.1e-12 76.3 62 61.3
Sopen01g048870 Solanum pennellii HOM05D007794 ORTHO05D009810 6.9e-12 75.1 305 25.9
Oeu059893.1 Olea europaea HOM05D007794 ORTHO05D009810 1.2e-11 74.3 59 64.4
Nn3g21331 Nelumbo nucifera HOM05D007794 ORTHO05D009810 1.5e-11 73.9 70 55.7
Solyc01g106140.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 2.0e-11 73.6 60 61.7
PGSC0003DMG400035168 Solanum tuberosum HOM05D007794 ORTHO05D009810 2.0e-11 73.6 60 60.0
Nitab4.5_0005609g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 2.6e-11 73.2 60 61.7
Solyc01g106510.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 4.5e-11 72.4 305 25.6
PGSC0003DMG400010680 Solanum tuberosum HOM05D007794 ORTHO05D009810 7.7e-11 71.6 60 58.3
Thecc.02G126700 Theobroma cacao HOM05D007794 ORTHO05D009810 7.7e-11 71.6 60 61.7
CAN.G1074.4 Capsicum annuum HOM05D007794 ORTHO05D009810 1.0e-10 71.2 66 51.5
Manes.10G095400 Manihot esculenta HOM05D007794 ORTHO05D009810 1.0e-10 71.2 60 65.0
Sopen01g048890 Solanum pennellii HOM05D007794 ORTHO05D009810 1.0e-10 71.2 60 60.0
Nitab4.5_0001477g0100 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.3e-10 70.9 60 60.0
Migut.N01108 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.7e-10 70.5 59 62.7
PGSC0003DMG400010679 Solanum tuberosum HOM05D007794 ORTHO05D009810 2.2e-10 70.1 60 56.7
CAN.G504.32 Capsicum annuum HOM05D007794 ORTHO05D009810 2.9e-10 69.7 62 56.5
Manes.10G095500 Manihot esculenta HOM05D007794 ORTHO05D009810 2.9e-10 69.7 318 23.6
Nitab4.5_0002750g0070 Nicotiana tabacum HOM05D007794 ORTHO05D009810 3.8e-10 69.3 62 56.5
Nitab4.5_0005908g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 3.8e-10 69.3 59 59.3
Migut.K01245 Erythranthe guttata HOM05D007794 ORTHO05D009810 8.5e-10 68.2 60 60.0
Migut.N01109 Erythranthe guttata HOM05D007794 ORTHO05D009810 8.5e-10 68.2 60 60.0
Sabra09G0060800 Salix brachista HOM05D007794 ORTHO05D009810 8.5e-10 68.2 62 56.5
Solyc01g106130.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 8.5e-10 68.2 60 56.7
TPR.G17365 Trifolium pratense HOM05D007794 ORTHO05D009810 1.1e-09 67.8 60 60.0
VMungo0251G0278 Vigna mungo HOM05D007794 ORTHO05D009810 1.9e-09 67.0 63 47.6
Potri.009G078900 Populus trichocarpa HOM05D007794 ORTHO05D009810 2.5e-09 66.6 62 54.8
Solyc01g106520.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 4.2e-09 65.9 62 56.5
Sopen01g048880 Solanum pennellii HOM05D007794 ORTHO05D009810 5.5e-09 65.5 62 56.5
Migut.C00208 Erythranthe guttata HOM05D007794 ORTHO05D009810 7.2e-09 65.1 57 61.4
Sopen01g048510 Solanum pennellii HOM05D007794 ORTHO05D009810 1.2e-08 64.3 60 53.3
COL.COLO4_32419 Corchorus olitorius HOM05D007794 ORTHO05D009810 2.1e-08 63.5 96 39.6
Sopen01g048520 Solanum pennellii HOM05D007794 ORTHO05D009810 3.6e-08 62.8 60 55.0
Migut.C00193 Erythranthe guttata HOM05D007794 ORTHO05D009810 6.1e-08 62.0 57 57.9
Migut.C00196 Erythranthe guttata HOM05D007794 ORTHO05D009810 6.1e-08 62.0 57 56.1
Migut.C00190 Erythranthe guttata HOM05D007794 ORTHO05D009810 7.9e-08 61.6 57 59.6
Ciclev10029800m.g Citrus clementina HOM05D007794 ORTHO05D009810 1.0e-07 61.2 123 36.6
Migut.C00194 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.0e-07 61.2 57 57.9
Ciclev10030146m.g Citrus clementina HOM05D007794 ORTHO05D009810 3.9e-07 59.3 123 36.6
Migut.C00191 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.9e-07 59.3 56 55.4
Migut.C00192 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.9e-07 59.3 57 56.1
Migut.C00209 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.9e-07 59.3 60 48.3
Migut.O00773 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.9e-07 59.3 60 48.3
Migut.N01107 Erythranthe guttata HOM05D007794 ORTHO05D009810 8.8e-07 58.2 47 66.0
Peaxi162Scf00299g00320 Petunia axillaris HOM05D007794 ORTHO05D009810 2.0e-06 57.0 75 45.3
SGA_v2.0_scaffold207G41944 Striga asiatica HOM05D007794 ORTHO05D009810 4.4e-06 55.8 66 47.0
COL.COLO4_32420 Corchorus olitorius HOM05D007794 ORTHO05D009810 5.7e-06 55.5 137 28.5


User provided reference genes

Program Settings