Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0088200 Rhododendron simsii HOM05D008336 ORTHO05D011831 6.9e-306 1053.1 524 100.0
Rhsim01G0070500 Rhododendron simsii HOM05D008336 ORTHO05D011520 3.0e-59 233.8 179 71.5
Rhsim09G0068800 Rhododendron simsii HOM05D008336 ORTHO05D011831 3.1e-56 223.8 154 72.7
Rhsim08G0044600 Rhododendron simsii HOM05D008336 ORTHO05D011520 1.2e-36 158.7 340 31.5
vmacro23315 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 2.7e-36 157.5 310 31.3
Rhsim03G0120000 Rhododendron simsii HOM05D008336 ORTHO05D011520 1.5e-29 135.2 147 46.9
vmacro10190 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 8.0e-28 129.4 136 49.3
vmacro23524 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 8.0e-28 129.4 136 49.3
Rhsim08G0116600 Rhododendron simsii HOM05D008336 ORTHO05D011520 4.3e-21 107.1 335 26.3
Rhsim13G0068800 Rhododendron simsii HOM05D008336 ORTHO05D339376 5.8e-18 96.7 91 51.6
vmacro17288 Vaccinium macrocarpon HOM05D008860 ORTHO05D010619 8.3e-17 92.8 262 27.9
Oeu030897.1 Olea europaea HOM05D008860 ORTHO05D010619 3.2e-16 90.9 204 27.9
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 7.8e-15 86.3 153 31.4
Oeu003462.1 Olea europaea HOM05D008860 ORTHO05D010619 7.8e-15 86.3 199 28.6
Oeu032902.1 Olea europaea HOM05D008860 ORTHO05D010619 6.2e-12 76.6 135 33.3
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.1e-11 75.9 159 32.1
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 2.3e-11 74.7 128 30.5
Oeu029240.1 Olea europaea HOM05D008860 ORTHO05D010619 4.0e-11 73.9 135 32.6
CANSAT01G1154 Cannabis sativa HOM05D000824 ORTHO05D010619 5.2e-11 73.6 133 29.3
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 5.2e-11 73.6 137 31.4
Atru.chr3.2966 Acer truncatum HOM05D008860 ORTHO05D010619 6.8e-11 73.2 148 31.8
vmacro14160 Vaccinium macrocarpon HOM05D001398 ORTHO05D015576 1.2e-10 72.4 71 49.3
Rhsim06G0109600 Rhododendron simsii HOM05D002224 ORTHO05D002334 2.0e-10 71.6 197 27.4
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.4e-10 70.5 159 23.9
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 1.7e-09 68.6 211 26.5
Oeu026609.1 Olea europaea HOM05D008860 ORTHO05D010619 1.7e-09 68.6 187 26.7
PGSC0003DMG400001679 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.2e-09 68.2 208 25.5
CSS0028456 Camellia sinensis var. sinensis HOM05D002261 ORTHO05D002334 2.9e-09 67.8 139 25.9
CANSAT78G1911 Cannabis sativa HOM05D000096 ORTHO05D010619 2.9e-09 67.8 137 29.9
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 2.9e-09 67.8 37 78.4
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 4.9e-09 67.0 125 31.2
Rhsim02G0151400 Rhododendron simsii HOM05D008336 ORTHO05D011831 4.9e-09 67.0 152 29.6
vmacro04464 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 6.4e-09 66.6 133 33.1
vmacro21104 Vaccinium macrocarpon HOM05D008336 ORTHO05D008997 1.1e-08 65.9 121 33.1
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 2.4e-08 64.7 37 78.4
Dinv36352 Davidia involucrata HOM05D009267 ORTHO05D000302 2.4e-08 64.7 143 27.3
Hund13175 Selenicereus undatus HOM05D003315 ORTHO05D003407 2.4e-08 64.7 144 30.6
AUR62040085 Chenopodium quinoa HOM05D003315 ORTHO05D003407 3.2e-08 64.3 233 24.5
AUR62008720 Chenopodium quinoa HOM05D003315 ORTHO05D003407 4.1e-08 63.9 206 28.6
CANSAT56G0625 Cannabis sativa HOM05D008860 ORTHO05D010619 7.0e-08 63.2 138 31.9
AUR62041240 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.2e-07 62.4 207 29.0
Oeu024002.2 Olea europaea HOM05D008860 ORTHO05D010619 1.2e-07 62.4 113 27.4
Rhsim02G0026000 Rhododendron simsii HOM05D000633 ORTHO05D000477 1.2e-07 62.4 125 41.6
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 1.2e-07 62.4 37 70.3
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 1.6e-07 62.0 138 29.7
vmacro12721 Vaccinium macrocarpon HOM05D008336 ORTHO05D011520 2.1e-07 61.6 88 38.6
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 3.5e-07 60.8 118 30.5
Oeu058530.1 Olea europaea HOM05D008860 ORTHO05D010619 3.5e-07 60.8 155 26.5
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 6.0e-07 60.1 164 26.8
vmacro00389 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 6.0e-07 60.1 127 34.6
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 7.8e-07 59.7 133 28.6
Peaxi162Scf00308g00076 Petunia axillaris HOM05D002261 ORTHO05D002334 1.3e-06 58.9 218 26.6
Peaxi162Scf00809g00418 Petunia axillaris HOM05D002261 ORTHO05D002334 1.7e-06 58.5 142 28.9
AUR62025720 Chenopodium quinoa HOM05D003315 ORTHO05D003407 3.9e-06 57.4 169 27.2
Rhsim01G0161000 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.9e-06 57.4 78 29.5
Hund12279 Selenicereus undatus HOM05D003315 ORTHO05D003407 3.9e-06 57.4 86 34.9
CANSAT11G0110 Cannabis sativa HOM05D009267 ORTHO05D010384 5.1e-06 57.0 212 20.8
Hma1.2p1_2379F.1_g320940 Hydrangea macrophylla HOM05D009267 ORTHO05D010619 5.1e-06 57.0 106 30.2
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.1e-06 57.0 273 25.3
AUR62041084 Chenopodium quinoa HOM05D003315 ORTHO05D003407 6.6e-06 56.6 162 25.9
AUR62030527 Chenopodium quinoa HOM05D003315 ORTHO05D003407 8.6e-06 56.2 164 25.6


User provided reference genes

Program Settings