Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 4.6e-261 904.0 465 100.0
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 7.0e-76 288.9 273 60.8
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 9.5e-73 278.5 273 59.3
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 3.4e-62 243.4 245 60.4
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 5.4e-60 236.1 275 50.5
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 6.0e-59 232.6 244 57.0
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 3.0e-58 230.3 265 52.1
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 8.6e-58 228.8 274 48.5
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 2.5e-57 227.3 267 50.9
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 2.8e-56 223.8 265 50.6
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 6.2e-56 222.6 269 51.3
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 2.0e-54 217.6 268 48.1
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 7.5e-54 215.7 271 48.0
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 1.3e-53 214.9 266 48.1
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 6.4e-53 212.6 265 47.9
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 8.3e-53 212.2 276 46.4
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 1.9e-52 211.1 268 46.6
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 2.4e-52 210.7 268 47.0
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 2.7e-51 207.2 266 48.1
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 3.5e-51 206.8 265 47.9
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 4.6e-51 206.5 271 47.2
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 6.0e-51 206.1 268 49.3
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 7.8e-51 205.7 265 46.0
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 7.8e-51 205.7 257 47.9
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 1.0e-50 205.3 265 46.8
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 3.0e-50 203.8 271 48.3
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 2.5e-49 200.7 265 45.3
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 2.5e-49 200.7 265 45.3
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 3.6e-48 196.8 269 46.8
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 6.2e-48 196.1 266 46.6
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 8.1e-48 195.7 268 45.1
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 8.1e-48 195.7 266 44.7
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 1.1e-47 195.3 268 45.9
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 1.4e-47 194.9 269 45.7
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 4.0e-47 193.4 264 46.2
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 6.8e-47 192.6 260 46.2
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 1.2e-46 191.8 265 46.0
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 2.2e-45 187.6 338 39.6
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 3.8e-45 186.8 265 46.0
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 3.2e-44 183.7 268 45.1
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 5.4e-44 183.0 263 44.5
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 2.3e-42 177.6 266 42.9
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 3.9e-42 176.8 269 46.1
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 6.6e-42 176.0 265 41.9
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 1.9e-41 174.5 259 42.9
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 4.3e-41 173.3 265 41.9
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 5.6e-41 172.9 265 41.9
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 5.6e-41 172.9 252 44.4
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 5.6e-41 172.9 252 44.4
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 4.7e-40 169.9 270 40.0
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 6.2e-40 169.5 264 42.4
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 3.1e-39 167.2 263 41.8
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 1.7e-37 161.4 265 40.8
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.7e-37 161.4 265 40.8
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 2.2e-37 161.0 268 39.2
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 4.9e-37 159.8 266 40.2
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 8.4e-37 159.1 265 40.4
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 1.1e-36 158.7 268 41.0
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 1.1e-36 158.7 260 42.3
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 2.4e-36 157.5 193 49.7
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 3.2e-36 157.1 271 38.7
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 3.2e-36 157.1 284 39.1
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 7.1e-36 156.0 271 39.5
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 9.3e-36 155.6 256 40.6
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 1.2e-35 155.2 252 42.1
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 7.8e-35 152.5 259 40.2
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.3e-34 151.0 265 38.9
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 6.6e-34 149.4 245 40.4
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 6.6e-34 149.4 281 38.8
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 8.7e-34 149.1 260 39.2
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 1.1e-33 148.7 252 42.9
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 1.1e-33 148.7 272 39.0
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 1.9e-33 147.9 251 40.6
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 2.5e-33 147.5 274 37.2
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 2.5e-33 147.5 274 37.2
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 9.6e-33 145.6 265 37.4
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 1.3e-32 145.2 260 36.5
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 2.1e-32 144.4 166 50.6
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 2.8e-32 144.1 219 42.5
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.8e-32 144.1 328 34.1
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 3.6e-32 143.7 251 40.2
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 4.8e-32 143.3 265 36.2
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 6.2e-32 142.9 244 41.4
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 8.1e-32 142.5 265 36.2
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 1.4e-31 141.7 267 38.2
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 5.3e-31 139.8 242 41.3
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 5.3e-31 139.8 220 42.3
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 6.9e-31 139.4 220 42.3
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 2.6e-30 137.5 182 45.6
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 2.6e-30 137.5 265 37.0
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 3.4e-30 137.1 285 37.2
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 7.6e-30 136.0 220 41.8
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.9e-29 134.0 265 36.2
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 8.4e-29 132.5 185 44.9
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 2.4e-28 131.0 221 38.5
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 1.6e-27 128.3 194 42.8
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 2.7e-27 127.5 157 47.8
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 7.9e-27 125.9 264 36.7
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 4.3e-25 120.2 225 38.2
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 4.3e-25 120.2 145 51.0
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 7.4e-25 119.4 220 38.6
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 1.8e-23 114.8 155 43.9
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 1.5e-22 111.7 260 33.5
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 5.8e-22 109.8 270 33.0
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 1.7e-21 108.2 276 34.4
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 1.4e-20 105.1 256 32.8
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 1.3e-16 92.0 186 38.2
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 1.3e-16 92.0 177 35.0
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 7.9e-11 72.8 48 66.7
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 5.1e-10 70.1 52 59.6
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 8.7e-10 69.3 96 41.7
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 1.9e-09 68.2 213 27.7
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 3.7e-08 63.9 160 30.0
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 2.0e-06 58.2 206 28.2
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 7.6e-06 56.2 38 60.5


User provided reference genes

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