Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 1.5e-258 896.0 544 100.0
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 5.9e-199 698.0 511 79.8
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.7e-190 669.8 496 73.6
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 4.2e-189 665.2 510 71.6
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 1.7e-185 653.3 510 70.8
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 1.0e-179 634.0 510 68.0
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 9.7e-178 627.5 495 71.1
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 3.1e-176 622.5 506 67.2
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 7.0e-176 621.3 504 70.4
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 7.0e-176 621.3 504 70.4
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 1.3e-169 600.5 509 67.0
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 1.3e-169 600.5 513 65.9
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 1.0e-163 580.9 509 66.4
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 1.5e-162 577.0 511 62.8
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 9.8e-162 574.3 497 67.6
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 9.8e-162 574.3 512 67.2
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 3.7e-161 572.4 516 63.2
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 6.3e-161 571.6 510 62.7
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 2.4e-160 569.7 506 63.0
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 7.0e-160 568.2 510 62.5
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 7.0e-160 568.2 511 65.4
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 1.6e-159 567.0 592 57.6
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.6e-159 567.0 518 64.7
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 2.7e-159 566.2 511 61.8
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 3.5e-159 565.8 505 62.8
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 5.9e-159 565.1 492 67.1
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 1.7e-158 563.5 500 62.8
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 1.7e-158 563.5 506 63.8
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 2.3e-158 563.1 521 61.2
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 5.0e-158 562.0 502 67.3
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 1.1e-157 560.8 511 65.4
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 1.1e-157 560.8 505 66.1
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 1.9e-157 560.1 506 65.0
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 3.3e-157 559.3 507 61.9
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 4.2e-157 558.9 511 65.2
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 9.5e-157 557.8 506 64.0
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 8.0e-156 554.7 511 61.6
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 1.4e-155 553.9 510 60.6
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.4e-155 553.9 510 60.0
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.8e-155 553.5 510 62.2
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 6.8e-155 551.6 509 65.0
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 6.8e-155 551.6 510 60.2
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.5e-154 550.4 489 65.8
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 3.4e-154 549.3 509 60.7
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 4.4e-154 548.9 510 61.8
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 3.7e-153 545.8 508 59.8
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 8.3e-153 544.7 506 60.1
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 8.3e-153 544.7 439 67.4
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 8.3e-153 544.7 508 59.1
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 1.4e-152 543.9 513 61.8
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 3.1e-152 542.7 512 63.1
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 2.0e-151 540.0 433 67.2
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 1.0e-150 537.7 505 64.2
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 2.9e-150 536.2 497 61.4
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 5.0e-150 535.4 502 62.9
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 5.6e-149 531.9 510 59.0
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 5.6e-149 531.9 502 60.4
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 2.8e-148 529.6 477 64.6
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 8.0e-148 528.1 390 71.3
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 1.3e-145 520.8 508 61.4
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 1.9e-144 516.9 498 58.8
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 1.2e-143 514.2 504 62.9
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 1.3e-142 510.8 512 58.6
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 2.3e-142 510.0 508 61.6
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 3.9e-142 509.2 439 64.0
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 8.6e-142 508.1 435 64.6
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 1.1e-141 507.7 475 61.3
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.1e-141 507.7 438 64.2
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 1.2e-140 504.2 508 60.6
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 1.8e-139 500.4 500 58.0
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 3.1e-139 499.6 500 56.4
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 1.2e-138 497.7 494 57.1
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 4.4e-138 495.7 500 56.8
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 5.8e-138 495.4 510 59.8
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 9.8e-138 494.6 508 61.0
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 2.2e-137 493.4 507 56.8
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 4.9e-137 492.3 508 61.2
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 8.3e-137 491.5 508 57.9
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 3.2e-136 489.6 507 56.4
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 3.2e-136 489.6 507 56.4
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 2.7e-135 486.5 508 57.9
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 2.7e-135 486.5 512 55.9
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 3.5e-135 486.1 435 60.9
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 4.6e-135 485.7 390 66.7
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 2.3e-134 483.4 510 61.4
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 5.1e-134 482.3 508 59.1
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 1.5e-133 480.7 503 58.3
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 1.2e-132 477.6 507 55.2
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 1.2e-132 477.6 507 55.2
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 1.6e-132 477.2 509 58.9
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 3.6e-132 476.1 510 56.7
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 8.1e-132 474.9 507 55.8
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 8.1e-132 474.9 423 61.9
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 1.8e-131 473.8 507 54.8
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 9.9e-130 468.0 428 60.3
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 2.2e-129 466.8 510 54.5
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 6.4e-129 465.3 507 54.4
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 1.1e-128 464.5 507 54.4
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 7.1e-128 461.8 429 60.4
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 1.6e-127 460.7 434 60.4
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 2.1e-127 460.3 507 55.6
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 1.0e-126 458.0 386 66.8
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 1.9e-125 453.8 389 62.2
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 4.3e-125 452.6 497 51.9
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 8.4e-121 438.3 434 56.0
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 9.3e-120 434.9 505 57.2
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 1.2e-119 434.5 388 61.1
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 3.0e-118 429.9 416 62.5
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 2.2e-113 413.7 387 60.2
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 4.9e-113 412.5 380 58.2
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 1.7e-110 404.1 538 48.9
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 1.3e-108 397.9 365 61.6
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 2.4e-99 367.1 519 44.3
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 1.7e-97 360.9 315 61.0
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 3.0e-94 350.1 276 67.8
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 8.7e-94 348.6 276 67.4
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 3.1e-91 340.1 522 40.6
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 6.9e-91 339.0 372 58.9
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 7.9e-87 325.5 354 54.2
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 1.1e-85 321.6 512 40.2
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 5.7e-85 319.3 290 57.6
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 7.7e-82 308.9 298 64.1
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 3.1e-75 287.0 229 64.2
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 1.2e-74 285.0 321 51.7
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 2.2e-73 280.8 524 38.2
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 7.9e-71 272.3 616 35.4
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 2.0e-69 267.7 356 51.4
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 5.0e-65 253.1 503 39.4
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 1.8e-59 234.6 177 70.6
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 1.4e-51 208.4 214 68.2
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 3.1e-43 180.6 159 62.3
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 1.9e-40 171.4 175 54.9
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 8.0e-39 166.0 144 64.6
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 6.6e-33 146.4 178 64.0
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.1e-32 145.6 109 68.8
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 4.4e-29 133.7 108 68.5
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 4.4e-29 133.7 108 68.5
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 5.8e-29 133.3 117 58.1
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 1.6e-23 115.2 126 50.8
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 8.3e-20 102.8 156 44.2
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 2.1e-18 98.2 223 39.5
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 3.5e-18 97.4 154 46.1
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 5.6e-16 90.1 75 65.3
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 3.6e-15 87.4 107 44.9
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 8.1e-15 86.3 97 53.6
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 4.0e-14 84.0 70 65.7
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 7.6e-13 79.7 99 45.5
CSS0009254 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 9.9e-13 79.3 148 40.5
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 1.7e-12 78.6 82 52.4
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 4.9e-12 77.0 56 67.9
CSS0045496 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 4.1e-11 73.9 153 39.2
CSS0049387 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 2.3e-09 68.2 145 37.9
arahy.Tifrunner.gnm1.ann1.JF64TB Arachis hypogaea HOM05D004816 ORTHO05D006043 3.9e-09 67.4 94 47.9
Cre06.g302850 Chlamydomonas reinhardtii HOM05D004816 ORTHO05D006043 6.8e-06 56.6 227 26.4
CAN.G322.73 Capsicum annuum HOM05D004816 ORTHO05D006043 8.9e-06 56.2 73 49.3


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