Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0059600 Rhododendron simsii HOM05D014298 ORTHO05D001342 4.0e-119 431.4 212 100.0
Rhsim05G0058500 Rhododendron simsii HOM05D014298 ORTHO05D001342 7.5e-110 400.6 241 84.6
Rhsim05G0059300 Rhododendron simsii HOM05D014298 ORTHO05D001342 4.3e-105 384.8 243 82.3
Rhsim05G0057500 Rhododendron simsii HOM05D014298 ORTHO05D340078 4.6e-67 258.5 172 76.2
Rhsim05G0057900 Rhododendron simsii HOM05D014298 ORTHO05D338638 8.2e-48 194.5 202 54.5
Rhsim05G0057400 Rhododendron simsii HOM05D014298 ORTHO05D001342 1.0e-29 134.4 79 83.5
Rhsim05G0058600 Rhododendron simsii HOM05D014298 ORTHO05D001342 1.5e-20 104.0 193 38.3
Rhsim05G0058100 Rhododendron simsii HOM05D000237 ORTHO05D001145 2.7e-19 99.8 143 42.7
Rhsim05G0058200 Rhododendron simsii HOM05D014298 ORTHO05D001342 3.6e-19 99.4 155 40.0
Rhsim05G0059800 Rhododendron simsii HOM05D014298 ORTHO05D001342 9.8e-17 91.3 145 39.3
Rhsim05G0080900 Rhododendron simsii HOM05D014298 ORTHO05D339994 1.3e-13 80.9 174 35.6
TWI38G1624 Tripterygium wilfordii HOM05D001521 ORTHO05D001342 8.0e-11 71.6 99 41.4
Prupe.2G097800 Prunus persica HOM05D001521 ORTHO05D001342 5.2e-10 68.9 122 40.2
Hma1.2p1_1715F.1_g299020 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 6.8e-10 68.6 126 34.1
MD02G1240000 Malus domestica HOM05D001521 ORTHO05D001342 6.8e-10 68.6 106 40.6
TAR383G0835 Trochodendron aralioides HOM05D001521 ORTHO05D001342 2.6e-09 66.6 96 40.6
Hma1.2p1_0225F.1_g094780 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 3.4e-09 66.2 96 40.6
RcHm_v2.0_Chr1g0337031 Rosa chinensis HOM05D001521 ORTHO05D001342 3.4e-09 66.2 109 36.7
MD02G1240200 Malus domestica HOM05D001521 ORTHO05D001342 1.3e-08 64.3 109 39.4
Rhsim01G0221700 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.3e-08 64.3 91 44.0
GSVIVG01028606001 Vitis vinifera HOM05D001521 ORTHO05D001342 1.7e-08 63.9 96 37.5
GSVIVG01028618001 Vitis vinifera HOM05D001521 ORTHO05D001342 2.2e-08 63.5 96 37.5
Dinv37718 Davidia involucrata HOM05D001521 ORTHO05D001342 3.7e-08 62.8 98 41.8
Cpa.g.sc264.7 Carica papaya HOM05D001521 ORTHO05D001342 4.9e-08 62.4 96 40.6
Cpa.g.sc264.8 Carica papaya HOM05D001521 ORTHO05D001342 6.4e-08 62.0 96 38.5
MD07G1171100 Malus domestica HOM05D001521 ORTHO05D001342 8.3e-08 61.6 106 37.7
Rhsim08G0035600 Rhododendron simsii HOM05D001521 ORTHO05D001342 8.3e-08 61.6 97 39.2
TAR636G2451 Trochodendron aralioides HOM05D001521 ORTHO05D001342 8.3e-08 61.6 96 40.6
Sc19g0001570 Simmondsia chinensis HOM05D001521 ORTHO05D001342 1.4e-07 60.8 96 40.6
ClCG03G004470 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.8e-07 60.5 97 42.3
RcHm_v2.0_Chr1g0336971 Rosa chinensis HOM05D001521 ORTHO05D001342 1.8e-07 60.5 99 39.4
CsaV3_6G008850 Cucumis sativus L. HOM05D001521 ORTHO05D001342 2.4e-07 60.1 95 36.8
Dinv12865 Davidia involucrata HOM05D001521 ORTHO05D001342 3.2e-07 59.7 96 37.5
MD01G1104300 Malus domestica HOM05D001521 ORTHO05D001342 7.0e-07 58.5 103 37.9
Cpa.g.sc1831.1 Carica papaya HOM05D001521 ORTHO05D001342 9.2e-07 58.2 96 38.5
Lj4P372T19 Lonicera japonica HOM05D001521 ORTHO05D001342 9.2e-07 58.2 96 39.6
Cpa.g.c44888 Carica papaya HOM05D001521 ORTHO05D001342 1.2e-06 57.8 96 34.4
Cpa.g.sc291.2 Carica papaya HOM05D001521 ORTHO05D001342 1.2e-06 57.8 96 34.4
ClCG06G000900 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.2e-06 57.8 95 34.7
ClCG06G001040 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.2e-06 57.8 96 38.5
Lj4P373T17 Lonicera japonica HOM05D001521 ORTHO05D001342 1.2e-06 57.8 96 39.6
FvH4_7g07020 Fragaria vesca HOM05D001521 ORTHO05D001342 1.6e-06 57.4 97 39.2
FAN06G3326 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.6e-06 57.4 97 39.2
FAN10G4107 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.6e-06 57.4 97 39.2
TAR371G0196 Trochodendron aralioides HOM05D001521 ORTHO05D001342 1.6e-06 57.4 96 38.5
CsaV3_6G006950 Cucumis sativus L. HOM05D001521 ORTHO05D001342 2.0e-06 57.0 96 38.5
MELO3C022430.2 Cucumis melo HOM05D001521 ORTHO05D001342 2.7e-06 56.6 96 37.5
PSO135G0667 Papaver somniferum HOM05D001521 ORTHO05D001342 2.7e-06 56.6 94 36.2
PSO409G0016 Papaver somniferum HOM05D001521 ORTHO05D001342 5.9e-06 55.5 107 35.5
Sed0023711 Sechium edule HOM05D001521 ORTHO05D001342 5.9e-06 55.5 94 33.0


User provided reference genes

Program Settings