Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0059300 Rhododendron simsii HOM05D014298 ORTHO05D001342 4.9e-137 491.1 243 100.0
Rhsim05G0058500 Rhododendron simsii HOM05D014298 ORTHO05D001342 5.6e-125 451.1 243 93.4
Rhsim05G0059600 Rhododendron simsii HOM05D014298 ORTHO05D001342 3.2e-104 382.1 243 82.3
Rhsim05G0057500 Rhododendron simsii HOM05D014298 ORTHO05D340078 6.9e-83 311.2 174 88.5
Rhsim05G0057900 Rhododendron simsii HOM05D014298 ORTHO05D338638 9.7e-61 237.7 202 62.9
Rhsim05G0057400 Rhododendron simsii HOM05D014298 ORTHO05D001342 8.0e-39 164.9 207 48.3
Rhsim05G0058600 Rhododendron simsii HOM05D014298 ORTHO05D001342 2.1e-31 140.2 193 42.5
Rhsim05G0059800 Rhododendron simsii HOM05D014298 ORTHO05D001342 3.4e-29 132.9 220 39.1
Rhsim05G0058200 Rhododendron simsii HOM05D014298 ORTHO05D001342 5.7e-29 132.1 164 43.9
Rhsim05G0058100 Rhododendron simsii HOM05D000237 ORTHO05D001145 2.0e-21 107.1 211 34.1
Rhsim05G0080900 Rhododendron simsii HOM05D014298 ORTHO05D339994 8.3e-20 101.7 166 38.6
Hma1.2p1_0225F.1_g094780 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 8.3e-12 75.1 159 32.7
Cpa.g.sc264.8 Carica papaya HOM05D001521 ORTHO05D001342 1.4e-11 74.3 158 34.8
TAR383G0835 Trochodendron aralioides HOM05D001521 ORTHO05D001342 1.4e-11 74.3 161 34.2
Prupe.2G097800 Prunus persica HOM05D001521 ORTHO05D001342 2.4e-11 73.6 174 33.9
RcHm_v2.0_Chr1g0336971 Rosa chinensis HOM05D001521 ORTHO05D001342 3.2e-11 73.2 154 35.7
Rhsim08G0035600 Rhododendron simsii HOM05D001521 ORTHO05D001342 5.4e-11 72.4 161 34.2
MD02G1240200 Malus domestica HOM05D001521 ORTHO05D001342 7.0e-11 72.0 109 42.2
TWI38G1624 Tripterygium wilfordii HOM05D001521 ORTHO05D001342 7.0e-11 72.0 158 32.9
FvH4_7g07020 Fragaria vesca HOM05D001521 ORTHO05D001342 1.2e-10 71.2 153 33.3
FAN06G3326 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.2e-10 71.2 153 33.3
FAN10G4107 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.2e-10 71.2 153 33.3
Hma1.2p1_1715F.1_g299020 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.2e-10 71.2 101 43.6
MD02G1240000 Malus domestica HOM05D001521 ORTHO05D001342 1.2e-10 71.2 108 42.6
Cpa.g.sc264.7 Carica papaya HOM05D001521 ORTHO05D001342 2.0e-10 70.5 158 34.8
Rhsim01G0221700 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.0e-09 68.2 155 33.5
GSVIVG01028618001 Vitis vinifera HOM05D001521 ORTHO05D001342 1.0e-09 68.2 108 38.9
GSVIVG01028606001 Vitis vinifera HOM05D001521 ORTHO05D001342 1.7e-09 67.4 101 39.6
TAR371G0196 Trochodendron aralioides HOM05D001521 ORTHO05D001342 2.3e-09 67.0 156 31.4
TAR636G2451 Trochodendron aralioides HOM05D001521 ORTHO05D001342 2.3e-09 67.0 195 29.7
MD07G1171100 Malus domestica HOM05D001521 ORTHO05D001342 3.9e-09 66.2 181 30.4
Cpa.g.c44888 Carica papaya HOM05D001521 ORTHO05D001342 5.0e-09 65.9 160 30.6
Cpa.g.sc291.2 Carica papaya HOM05D001521 ORTHO05D001342 5.0e-09 65.9 160 30.6
Dinv37718 Davidia involucrata HOM05D001521 ORTHO05D001342 5.0e-09 65.9 115 40.9
RcHm_v2.0_Chr1g0337031 Rosa chinensis HOM05D001521 ORTHO05D001342 5.0e-09 65.9 109 36.7
ClCG03G004470 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.5e-08 64.3 104 43.3
MD01G1104300 Malus domestica HOM05D001521 ORTHO05D001342 1.5e-08 64.3 178 29.8
Dinv12865 Davidia involucrata HOM05D001521 ORTHO05D001342 3.3e-08 63.2 101 39.6
ClCG06G000900 Citrullus lanatus HOM05D001521 ORTHO05D001342 4.3e-08 62.8 101 36.6
Lj1C599T0 Lonicera japonica HOM05D001521 ORTHO05D001342 5.6e-08 62.4 158 32.9
Lj1C599T6 Lonicera japonica HOM05D001521 ORTHO05D001342 5.6e-08 62.4 159 34.0
CsaV3_6G006950 Cucumis sativus L. HOM05D001521 ORTHO05D001342 7.3e-08 62.0 162 30.2
ClCG06G001040 Citrullus lanatus HOM05D001521 ORTHO05D001342 9.5e-08 61.6 213 28.6
Sed0017368 Sechium edule HOM05D001521 ORTHO05D001342 1.2e-07 61.2 147 30.6
Cpa.g.sc83.17 Carica papaya HOM05D001521 ORTHO05D001342 1.6e-07 60.8 102 39.2
Lj4P372T19 Lonicera japonica HOM05D001521 ORTHO05D001342 1.6e-07 60.8 100 42.0
Lj4P373T17 Lonicera japonica HOM05D001521 ORTHO05D001342 2.1e-07 60.5 100 42.0
Cpa.g.sc1831.1 Carica papaya HOM05D001521 ORTHO05D001342 2.8e-07 60.1 101 39.6
Lj1C599T5 Lonicera japonica HOM05D001521 ORTHO05D001342 2.8e-07 60.1 159 33.3
Cpa.g.sc83.19 Carica papaya HOM05D001521 ORTHO05D001342 4.7e-07 59.3 102 38.2
Duzib177G0128 Durio zibethinus HOM05D001521 ORTHO05D001342 4.7e-07 59.3 168 29.2
Duzib177G0760 Durio zibethinus HOM05D001521 ORTHO05D001342 4.7e-07 59.3 168 29.8
Duzib177G0777 Durio zibethinus HOM05D001521 ORTHO05D001342 4.7e-07 59.3 168 29.2
Gohir.D02G019700 Gossypium hirsutum HOM05D001521 ORTHO05D001342 6.2e-07 58.9 123 36.6
Gorai.005G024800 Gossypium raimondii HOM05D001521 ORTHO05D001342 6.2e-07 58.9 123 36.6
Duzib177G0352 Durio zibethinus HOM05D001521 ORTHO05D001342 8.0e-07 58.5 168 28.6
Lj1P1067T12 Lonicera japonica HOM05D001521 ORTHO05D001342 8.0e-07 58.5 161 31.7
PSO135G0667 Papaver somniferum HOM05D001521 ORTHO05D001342 8.0e-07 58.5 158 31.6
Prupe.2G087400 Prunus persica HOM05D001521 ORTHO05D001342 8.0e-07 58.5 99 38.4
CANSAT11G0684 Cannabis sativa HOM05D001521 ORTHO05D001342 1.1e-06 58.2 111 36.9
Cpa.g.sc223.19 Carica papaya HOM05D001521 ORTHO05D001342 1.1e-06 58.2 104 36.5
CsaV3_6G008850 Cucumis sativus L. HOM05D001521 ORTHO05D001342 1.1e-06 58.2 103 35.9
PSO409G0016 Papaver somniferum HOM05D001521 ORTHO05D001342 1.1e-06 58.2 154 29.9
GSVIVG01028617001 Vitis vinifera HOM05D001521 ORTHO05D001342 1.1e-06 58.2 160 29.4
HanXRQChr07g0187091 Helianthus annuus HOM05D001521 ORTHO05D001342 1.4e-06 57.8 153 27.5
Hma1.2p1_0189F.1_g082933 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.4e-06 57.8 96 40.6
Sed0023711 Sechium edule HOM05D001521 ORTHO05D001342 1.8e-06 57.4 99 34.3
PSO421G0241 Papaver somniferum HOM05D001521 ORTHO05D001342 2.3e-06 57.0 154 29.2
Dinv04994 Davidia involucrata HOM05D001521 ORTHO05D001342 3.1e-06 56.6 115 33.9
HanXRQChr13g0405701 Helianthus annuus HOM05D001521 ORTHO05D001342 3.1e-06 56.6 104 32.7
MELO3C022430.2 Cucumis melo HOM05D001521 ORTHO05D001342 4.0e-06 56.2 101 36.6
PSO832G0723 Papaver somniferum HOM05D001521 ORTHO05D001342 4.0e-06 56.2 157 29.3
PSO832G1357 Papaver somniferum HOM05D001521 ORTHO05D001342 4.0e-06 56.2 157 29.3
PSO832G4060 Papaver somniferum HOM05D001521 ORTHO05D001342 4.0e-06 56.2 157 29.3
Duzib177G1034 Durio zibethinus HOM05D001521 ORTHO05D001342 5.2e-06 55.8 106 35.8
Lj4P372T18 Lonicera japonica HOM05D001521 ORTHO05D001342 6.8e-06 55.5 100 41.0
Sc19g0001570 Simmondsia chinensis HOM05D001521 ORTHO05D001342 8.9e-06 55.1 101 38.6


User provided reference genes

Program Settings