Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0059100 Rhododendron simsii HOM05D006545 ORTHO05D007985 1.4e-31 139.0 72 100.0
Rhsim03G0232100 Rhododendron simsii HOM05D000004 ORTHO05D007985 5.1e-10 67.4 37 86.5
vmacro06292 Vaccinium macrocarpon HOM05D006545 ORTHO05D007985 2.5e-09 65.1 37 86.5
Actinidia29903 Actinidia chinensis HOM05D000085 ORTHO05D001460 1.7e-08 62.4 75 50.7
MSTRG.10562 Avicennia marina HOM05D006545 ORTHO05D007985 2.2e-08 62.0 38 76.3
Nitab4.5_0008523g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 2.8e-08 61.6 38 78.9
Solyc12g008860.3 Solanum lycopersicum HOM05D006545 ORTHO05D007985 2.8e-08 61.6 38 76.3
Sopen12g003790 Solanum pennellii HOM05D006545 ORTHO05D007985 3.7e-08 61.2 37 78.4
TAR624G0377 Trochodendron aralioides HOM05D002302 ORTHO05D002728 6.3e-08 60.5 53 52.8
Dinv36770 Davidia involucrata HOM05D006545 ORTHO05D007985 1.4e-07 59.3 37 75.7
PGSC0003DMG400000279 Solanum tuberosum HOM05D006545 ORTHO05D007985 1.4e-07 59.3 37 75.7
Cc06_g11430 Coffea canephora HOM05D006545 ORTHO05D007985 1.8e-07 58.9 38 73.7
Dinv42321 Davidia involucrata HOM05D006545 ORTHO05D007985 1.8e-07 58.9 37 75.7
Migut.L01494 Erythranthe guttata HOM05D006545 ORTHO05D007985 1.8e-07 58.9 37 73.0
Actinidia19138 Actinidia chinensis HOM05D006545 ORTHO05D007985 2.4e-07 58.5 37 73.0
Haze_25916 Corylus avellana HOM05D005251 ORTHO05D006680 3.1e-07 58.2 44 63.6
Cfa003081 Carpinus fangiana HOM05D000085 ORTHO05D001460 5.3e-07 57.4 45 62.2
Nitab4.5_0000540g0270 Nicotiana tabacum HOM05D006545 ORTHO05D007985 6.9e-07 57.0 37 78.4
unitig_85.g27258 Utricularia gibba HOM05D006545 ORTHO05D007985 6.9e-07 57.0 37 73.0
Gohir.A05G030100 Gossypium hirsutum HOM05D006545 ORTHO05D007985 1.2e-06 56.2 37 70.3
Gohir.D05G031500 Gossypium hirsutum HOM05D006545 ORTHO05D007985 1.2e-06 56.2 37 70.3
Gorai.009G031700 Gossypium raimondii HOM05D006545 ORTHO05D007985 1.2e-06 56.2 37 70.3
Thecc.09G088900 Theobroma cacao HOM05D006545 ORTHO05D007985 1.2e-06 56.2 37 70.3
Nn8g38862 Nelumbo nucifera HOM05D006545 ORTHO05D007985 1.5e-06 55.8 62 50.0
GSVIVG01015199001 Vitis vinifera HOM05D006545 ORTHO05D007985 2.6e-06 55.1 37 64.9
CiPaw.04G149100 Carya illinoinensis HOM05D006545 ORTHO05D007985 3.4e-06 54.7 32 78.1
Duzib150G0099 Durio zibethinus HOM05D006545 ORTHO05D007985 3.4e-06 54.7 37 70.3
Potri.004G215200 Populus trichocarpa HOM05D006545 ORTHO05D007985 3.4e-06 54.7 37 73.0
Duzib168G1224 Durio zibethinus HOM05D006545 ORTHO05D007985 4.5e-06 54.3 37 67.6
DCAR_028856 Daucus carota HOM05D006545 ORTHO05D007985 5.9e-06 53.9 34 79.4
DCAR_032235 Daucus carota HOM05D006545 ORTHO05D007985 5.9e-06 53.9 34 79.4
HanXRQChr12g0363181 Helianthus annuus HOM05D006545 ORTHO05D007985 5.9e-06 53.9 37 64.9
CDE06G0764 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 7.7e-06 53.5 37 70.3
CDE07G1614 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 7.7e-06 53.5 37 70.3
Ciclev10010087m.g Citrus clementina HOM05D006545 ORTHO05D007985 7.7e-06 53.5 32 78.1
Nitab4.5_0004223g0010 Nicotiana tabacum HOM05D006545 ORTHO05D007985 7.7e-06 53.5 37 67.6


User provided reference genes

Program Settings