Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0058500 Rhododendron simsii HOM05D014298 ORTHO05D001342 3.1e-136 488.4 241 100.0
Rhsim05G0059300 Rhododendron simsii HOM05D014298 ORTHO05D001342 5.0e-126 454.5 243 93.4
Rhsim05G0059600 Rhododendron simsii HOM05D014298 ORTHO05D001342 3.8e-110 401.7 241 84.6
Rhsim05G0057500 Rhododendron simsii HOM05D014298 ORTHO05D340078 2.9e-89 332.4 172 93.6
Rhsim05G0057900 Rhododendron simsii HOM05D014298 ORTHO05D338638 8.4e-65 251.1 202 63.9
Rhsim05G0057400 Rhododendron simsii HOM05D014298 ORTHO05D001342 1.3e-41 174.1 206 49.0
Rhsim05G0058600 Rhododendron simsii HOM05D014298 ORTHO05D001342 2.5e-32 143.3 193 45.1
Rhsim05G0059800 Rhododendron simsii HOM05D014298 ORTHO05D001342 2.1e-31 140.2 220 41.8
Rhsim05G0058200 Rhododendron simsii HOM05D014298 ORTHO05D001342 4.8e-28 129.0 221 41.2
Rhsim05G0080900 Rhododendron simsii HOM05D014298 ORTHO05D339994 1.8e-22 110.5 174 41.4
Rhsim05G0058100 Rhododendron simsii HOM05D000237 ORTHO05D001145 5.2e-22 109.0 211 35.1
TWI38G1624 Tripterygium wilfordii HOM05D001521 ORTHO05D001342 1.7e-12 77.4 159 32.7
MD02G1240000 Malus domestica HOM05D001521 ORTHO05D001342 3.7e-12 76.3 108 42.6
Cpa.g.sc264.8 Carica papaya HOM05D001521 ORTHO05D001342 6.3e-12 75.5 159 35.8
MD02G1240200 Malus domestica HOM05D001521 ORTHO05D001342 1.1e-11 74.7 112 42.0
Prupe.2G097800 Prunus persica HOM05D001521 ORTHO05D001342 1.1e-11 74.7 105 44.8
FvH4_7g07020 Fragaria vesca HOM05D001521 ORTHO05D001342 1.8e-11 73.9 153 35.9
FAN06G3326 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.8e-11 73.9 153 35.9
FAN10G4107 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.8e-11 73.9 153 35.9
TAR383G0835 Trochodendron aralioides HOM05D001521 ORTHO05D001342 1.8e-11 73.9 159 32.7
Hma1.2p1_0225F.1_g094780 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 2.4e-11 73.6 157 29.9
Hma1.2p1_1715F.1_g299020 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 4.1e-11 72.8 139 33.1
Rhsim01G0221700 Rhododendron simsii HOM05D001521 ORTHO05D001342 5.3e-11 72.4 153 34.6
RcHm_v2.0_Chr1g0337031 Rosa chinensis HOM05D001521 ORTHO05D001342 7.0e-11 72.0 112 38.4
RcHm_v2.0_Chr1g0336971 Rosa chinensis HOM05D001521 ORTHO05D001342 9.1e-11 71.6 154 36.4
GSVIVG01028606001 Vitis vinifera HOM05D001521 ORTHO05D001342 9.1e-11 71.6 157 29.9
Prupe.2G097500 Prunus persica HOM05D001521 ORTHO05D001342 1.2e-10 71.2 110 41.8
GSVIVG01028618001 Vitis vinifera HOM05D001521 ORTHO05D001342 1.2e-10 71.2 106 38.7
Cpa.g.sc264.7 Carica papaya HOM05D001521 ORTHO05D001342 1.6e-10 70.9 99 43.4
CsaV3_6G008850 Cucumis sativus L. HOM05D001521 ORTHO05D001342 2.0e-10 70.5 101 39.6
Hma1.2p1_3600F.1_g336970 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 2.0e-10 70.5 103 43.7
Dinv12865 Davidia involucrata HOM05D001521 ORTHO05D001342 2.7e-10 70.1 158 32.3
Dinv37718 Davidia involucrata HOM05D001521 ORTHO05D001342 2.7e-10 70.1 115 41.7
MD07G1171100 Malus domestica HOM05D001521 ORTHO05D001342 4.5e-10 69.3 119 37.8
TAR371G0196 Trochodendron aralioides HOM05D001521 ORTHO05D001342 5.9e-10 68.9 156 32.7
ClCG03G004470 Citrullus lanatus HOM05D001521 ORTHO05D001342 7.7e-10 68.6 102 44.1
Rhsim08G0035600 Rhododendron simsii HOM05D001521 ORTHO05D001342 7.7e-10 68.6 100 41.0
TAR636G2451 Trochodendron aralioides HOM05D001521 ORTHO05D001342 7.7e-10 68.6 99 42.4
Hma1.2p1_0439F.1_g153130 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.0e-09 68.2 103 42.7
ClCG06G001040 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.7e-09 67.4 227 28.2
ClCG06G000900 Citrullus lanatus HOM05D001521 ORTHO05D001342 2.2e-09 67.0 99 37.4
CsaV3_6G006950 Cucumis sativus L. HOM05D001521 ORTHO05D001342 2.2e-09 67.0 160 31.9
Aqoxy7G03595 Aquilegia oxysepala HOM05D001521 ORTHO05D001342 2.9e-09 66.6 104 38.5
MD01G1104300 Malus domestica HOM05D001521 ORTHO05D001342 2.9e-09 66.6 110 39.1
Sc19g0001570 Simmondsia chinensis HOM05D001521 ORTHO05D001342 3.8e-09 66.2 123 35.0
Cpa.g.sc1831.1 Carica papaya HOM05D001521 ORTHO05D001342 5.0e-09 65.9 117 37.6
Lj1C599T0 Lonicera japonica HOM05D001521 ORTHO05D001342 6.5e-09 65.5 156 32.1
CANSAT21G0839 Cannabis sativa HOM05D001521 ORTHO05D001342 8.5e-09 65.1 118 36.4
PSO135G0667 Papaver somniferum HOM05D001521 ORTHO05D001342 8.5e-09 65.1 155 31.6
Cpa.g.c44888 Carica papaya HOM05D001521 ORTHO05D001342 1.1e-08 64.7 99 36.4
Cpa.g.sc291.2 Carica papaya HOM05D001521 ORTHO05D001342 1.1e-08 64.7 99 36.4
Hma1.2p1_0189F.1_g082933 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 2.5e-08 63.5 95 40.0
MELO3C022430.2 Cucumis melo HOM05D001521 ORTHO05D001342 3.2e-08 63.2 99 39.4
Lj1C599T6 Lonicera japonica HOM05D001521 ORTHO05D001342 3.2e-08 63.2 157 31.8
Prupe.2G087400 Prunus persica HOM05D001521 ORTHO05D001342 3.2e-08 63.2 163 31.9
PSO832G0723 Papaver somniferum HOM05D001521 ORTHO05D001342 4.2e-08 62.8 112 34.8
PSO832G1357 Papaver somniferum HOM05D001521 ORTHO05D001342 4.2e-08 62.8 112 34.8
PSO832G4060 Papaver somniferum HOM05D001521 ORTHO05D001342 4.2e-08 62.8 112 34.8
Lj4P372T19 Lonicera japonica HOM05D001521 ORTHO05D001342 5.5e-08 62.4 98 40.8
Sed0023711 Sechium edule HOM05D001521 ORTHO05D001342 5.5e-08 62.4 97 35.1
Cpa.g.sc567.1 Carica papaya HOM05D001521 ORTHO05D001342 7.2e-08 62.0 100 38.0
Lj4P373T17 Lonicera japonica HOM05D001521 ORTHO05D001342 7.2e-08 62.0 98 40.8
PSO421G0241 Papaver somniferum HOM05D001521 ORTHO05D001342 9.4e-08 61.6 102 37.3
Sed0017923 Sechium edule HOM05D001521 ORTHO05D001342 9.4e-08 61.6 99 34.3
CANSAT11G0684 Cannabis sativa HOM05D001521 ORTHO05D001342 1.2e-07 61.2 111 38.7
PSO409G0016 Papaver somniferum HOM05D001521 ORTHO05D001342 1.2e-07 61.2 99 38.4
Sed0024723 Sechium edule HOM05D001521 ORTHO05D001342 1.2e-07 61.2 99 34.3
Lj1P1067T12 Lonicera japonica HOM05D001521 ORTHO05D001342 1.6e-07 60.8 157 31.8
Sed0026868 Sechium edule HOM05D001521 ORTHO05D001342 1.6e-07 60.8 99 39.4
GSVIVG01028617001 Vitis vinifera HOM05D001521 ORTHO05D001342 1.6e-07 60.8 158 28.5
Gohir.A02G009300 Gossypium hirsutum HOM05D001521 ORTHO05D001342 2.1e-07 60.5 170 30.6
Cpa.g.sc223.19 Carica papaya HOM05D001521 ORTHO05D001342 2.7e-07 60.1 102 35.3
HanXRQChr07g0187091 Helianthus annuus HOM05D001521 ORTHO05D001342 2.7e-07 60.1 156 29.5
HanXRQChr13g0405701 Helianthus annuus HOM05D001521 ORTHO05D001342 3.6e-07 59.7 107 35.5
Gohir.D02G019700 Gossypium hirsutum HOM05D001521 ORTHO05D001342 4.7e-07 59.3 123 37.4
Gorai.005G024800 Gossypium raimondii HOM05D001521 ORTHO05D001342 4.7e-07 59.3 123 37.4
Lj1C599T5 Lonicera japonica HOM05D001521 ORTHO05D001342 4.7e-07 59.3 157 30.6
Cpa.g.c34789 Carica papaya HOM05D001521 ORTHO05D001342 6.1e-07 58.9 75 38.7
Sed0017368 Sechium edule HOM05D001521 ORTHO05D001342 6.1e-07 58.9 99 35.4
Dinv04994 Davidia involucrata HOM05D001521 ORTHO05D001342 8.0e-07 58.5 113 35.4
PSO031G0001 Papaver somniferum HOM05D001521 ORTHO05D001342 8.0e-07 58.5 149 28.9
Rhsim05G0011500 Rhododendron simsii HOM05D001521 ORTHO05D001342 8.0e-07 58.5 112 39.3
Lju124C11T1 Lonicera japonica HOM05D001521 ORTHO05D001342 1.0e-06 58.2 156 30.8
SalBow6G5371 Salvia bowleyana HOM05D001521 ORTHO05D001342 1.0e-06 58.2 103 35.9
Sed0003936 Sechium edule HOM05D001521 ORTHO05D001342 1.0e-06 58.2 98 36.7
Sed0017234 Sechium edule HOM05D001521 ORTHO05D001342 1.4e-06 57.8 98 35.7
CsaV3_6G006990 Cucumis sativus L. HOM05D001521 ORTHO05D001342 1.8e-06 57.4 158 25.9
Sed0028148 Sechium edule HOM05D001521 ORTHO05D001342 1.8e-06 57.4 98 35.7
ClCG06G001050 Citrullus lanatus HOM05D001521 ORTHO05D001342 2.3e-06 57.0 99 38.4
Duzib177G0128 Durio zibethinus HOM05D001521 ORTHO05D001342 2.3e-06 57.0 107 36.4
Duzib177G0777 Durio zibethinus HOM05D001521 ORTHO05D001342 2.3e-06 57.0 107 36.4
Lj4P372T18 Lonicera japonica HOM05D001521 ORTHO05D001342 2.3e-06 57.0 98 39.8
Sed0024914 Sechium edule HOM05D001521 ORTHO05D001342 2.3e-06 57.0 98 34.7
Duzib177G0760 Durio zibethinus HOM05D001521 ORTHO05D001342 4.0e-06 56.2 107 35.5
Lj9A162T18 Lonicera japonica HOM05D001521 ORTHO05D001342 4.0e-06 56.2 90 38.9
CsaV3_6G006970 Cucumis sativus L. HOM05D001521 ORTHO05D001342 5.2e-06 55.8 157 26.8
Dinv05622 Davidia involucrata HOM05D001521 ORTHO05D001342 6.8e-06 55.5 113 34.5
Duzib177G0352 Durio zibethinus HOM05D001521 ORTHO05D001342 6.8e-06 55.5 107 34.6
PSO339G3048 Papaver somniferum HOM05D001521 ORTHO05D001342 6.8e-06 55.5 122 31.1
Sed0020102 Sechium edule HOM05D001521 ORTHO05D001342 6.8e-06 55.5 97 33.0
Gohir.A02G009180 Gossypium hirsutum HOM05D001521 ORTHO05D001342 8.8e-06 55.1 154 33.1
Lj4P374T10 Lonicera japonica HOM05D001521 ORTHO05D001342 8.8e-06 55.1 98 38.8


User provided reference genes

Program Settings