Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0057400 Rhododendron simsii HOM05D014298 ORTHO05D001342 1.5e-159 566.2 304 100.0
Rhsim05G0058200 Rhododendron simsii HOM05D014298 ORTHO05D001342 1.0e-43 181.4 324 41.4
Rhsim05G0058600 Rhododendron simsii HOM05D014298 ORTHO05D001342 3.3e-42 176.4 309 37.5
Rhsim05G0058500 Rhododendron simsii HOM05D014298 ORTHO05D001342 5.7e-42 175.6 206 49.0
Rhsim05G0059800 Rhododendron simsii HOM05D014298 ORTHO05D001342 1.1e-40 171.4 308 37.7
Rhsim05G0059300 Rhododendron simsii HOM05D014298 ORTHO05D001342 2.0e-39 167.2 207 48.3
Rhsim05G0057900 Rhododendron simsii HOM05D014298 ORTHO05D338638 1.5e-34 151.0 165 52.1
Rhsim05G0059600 Rhododendron simsii HOM05D014298 ORTHO05D001342 2.5e-29 133.7 79 83.5
Rhsim05G0058100 Rhododendron simsii HOM05D000237 ORTHO05D001145 4.5e-23 112.8 311 31.5
Rhsim05G0080900 Rhododendron simsii HOM05D014298 ORTHO05D339994 1.1e-16 91.7 151 38.4
Rhsim05G0057500 Rhododendron simsii HOM05D014298 ORTHO05D340078 1.4e-16 91.3 134 42.5
Dinv37718 Davidia involucrata HOM05D001521 ORTHO05D001342 4.2e-13 79.7 114 44.7
Rhsim01G0221700 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.2e-12 78.2 132 40.9
Hma1.2p1_0439F.1_g153190 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 3.6e-12 76.6 108 44.4
Hma1.2p1_1715F.1_g299020 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 6.1e-12 75.9 108 43.5
Hma1.2p1_0225F.1_g094780 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 8.0e-12 75.5 157 33.8
Cpa.g.sc264.7 Carica papaya HOM05D001521 ORTHO05D001342 5.2e-11 72.8 105 44.8
TAR383G0835 Trochodendron aralioides HOM05D001521 ORTHO05D001342 1.5e-10 71.2 99 43.4
GSVIVG01028606001 Vitis vinifera HOM05D001521 ORTHO05D001342 1.5e-10 71.2 108 40.7
TAR371G0196 Trochodendron aralioides HOM05D001521 ORTHO05D001342 2.0e-10 70.9 154 34.4
GSVIVG01028618001 Vitis vinifera HOM05D001521 ORTHO05D001342 2.0e-10 70.9 108 41.7
Dinv12865 Davidia involucrata HOM05D001521 ORTHO05D001342 7.5e-10 68.9 158 34.8
Lj1C599T6 Lonicera japonica HOM05D001521 ORTHO05D001342 1.3e-09 68.2 161 35.4
MD07G1171100 Malus domestica HOM05D001521 ORTHO05D001342 1.3e-09 68.2 181 31.5
Prupe.2G097800 Prunus persica HOM05D001521 ORTHO05D001342 1.3e-09 68.2 172 31.4
Lj1C599T5 Lonicera japonica HOM05D001521 ORTHO05D001342 2.2e-09 67.4 162 34.0
TAR636G2451 Trochodendron aralioides HOM05D001521 ORTHO05D001342 4.8e-09 66.2 99 42.4
Hma1.2p1_3600F.1_g336970 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 6.3e-09 65.9 165 35.8
Cpa.g.sc264.8 Carica papaya HOM05D001521 ORTHO05D001342 1.1e-08 65.1 100 42.0
Hma1.2p1_0033F.1_g020970 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.1e-08 65.1 212 29.7
Hma1.2p1_0033F.1_g020980 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.1e-08 65.1 212 29.7
Hma1.2p1_0439F.1_g153130 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.4e-08 64.7 165 35.8
Cpa.g.c44888 Carica papaya HOM05D001521 ORTHO05D001342 1.8e-08 64.3 156 33.3
Cpa.g.sc291.2 Carica papaya HOM05D001521 ORTHO05D001342 1.8e-08 64.3 156 33.3
RcHm_v2.0_Chr1g0337031 Rosa chinensis HOM05D001521 ORTHO05D001342 1.8e-08 64.3 109 40.4
Lj1C599T0 Lonicera japonica HOM05D001521 ORTHO05D001342 3.1e-08 63.5 156 33.3
MD02G1240200 Malus domestica HOM05D001521 ORTHO05D001342 4.1e-08 63.2 109 38.5
RcHm_v2.0_Chr1g0336971 Rosa chinensis HOM05D001521 ORTHO05D001342 5.3e-08 62.8 157 33.8
Cpa.g.sc223.19 Carica papaya HOM05D001521 ORTHO05D001342 7.0e-08 62.4 99 37.4
Cpa.g.sc567.1 Carica papaya HOM05D001521 ORTHO05D001342 7.0e-08 62.4 115 38.3
Dinv37728 Davidia involucrata HOM05D001521 ORTHO05D001342 7.0e-08 62.4 70 50.0
Aqoxy7G03595 Aquilegia oxysepala HOM05D001521 ORTHO05D001342 9.1e-08 62.0 110 38.2
Lj9A162T18 Lonicera japonica HOM05D001521 ORTHO05D001342 9.1e-08 62.0 314 26.1
Prupe.2G097500 Prunus persica HOM05D001521 ORTHO05D001342 9.1e-08 62.0 110 36.4
MD03G1201400 Malus domestica HOM05D001521 ORTHO05D001342 1.2e-07 61.6 161 32.9
Prupe.2G087400 Prunus persica HOM05D001521 ORTHO05D001342 1.2e-07 61.6 116 38.8
FvH4_7g07020 Fragaria vesca HOM05D001521 ORTHO05D001342 1.6e-07 61.2 154 33.1
FAN06G3326 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.6e-07 61.2 154 33.1
FAN10G4107 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.6e-07 61.2 154 33.1
MD01G1104300 Malus domestica HOM05D001521 ORTHO05D001342 1.6e-07 61.2 176 31.2
MD02G1240000 Malus domestica HOM05D001521 ORTHO05D001342 1.6e-07 61.2 73 49.3
GSVIVG01028617001 Vitis vinifera HOM05D001521 ORTHO05D001342 1.6e-07 61.2 156 32.7
Oeu035081.1 Olea europaea HOM05D001521 ORTHO05D001342 2.7e-07 60.5 158 30.4
Prupe.2G097700 Prunus persica HOM05D001521 ORTHO05D001342 2.7e-07 60.5 154 32.5
TWI38G1624 Tripterygium wilfordii HOM05D001521 ORTHO05D001342 2.7e-07 60.5 98 37.8
CSS0010403 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 4.5e-07 59.7 163 33.7
Lju124C11T1 Lonicera japonica HOM05D001521 ORTHO05D001342 4.5e-07 59.7 302 27.2
Cpa.g.sc125.2 Carica papaya HOM05D001521 ORTHO05D001342 5.9e-07 59.3 154 29.9
ClCG06G001040 Citrullus lanatus HOM05D001521 ORTHO05D001342 5.9e-07 59.3 218 29.8
Sc19g0001570 Simmondsia chinensis HOM05D001521 ORTHO05D001342 5.9e-07 59.3 105 39.0
Cpa.g.sc1831.1 Carica papaya HOM05D001521 ORTHO05D001342 7.7e-07 58.9 99 39.4
PSO409G0016 Papaver somniferum HOM05D001521 ORTHO05D001342 7.7e-07 58.9 104 35.6
CsaV3_6G006950 Cucumis sativus L. HOM05D001521 ORTHO05D001342 1.0e-06 58.5 109 35.8
Rhsim05G0011700 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.0e-06 58.5 118 35.6
Cpa.g.sc83.19 Carica papaya HOM05D001521 ORTHO05D001342 1.3e-06 58.2 109 36.7
CANSAT80G1970 Cannabis sativa HOM05D001521 ORTHO05D001342 1.7e-06 57.8 108 37.0
MELO3C022430.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.7e-06 57.8 99 37.4
PSO421G0572 Papaver somniferum HOM05D001521 ORTHO05D001342 1.7e-06 57.8 205 27.3
Cpa.g.sc83.17 Carica papaya HOM05D001521 ORTHO05D001342 2.2e-06 57.4 109 36.7
Lj1P1067T12 Lonicera japonica HOM05D001521 ORTHO05D001342 5.0e-06 56.2 159 32.7
PSO421G0241 Papaver somniferum HOM05D001521 ORTHO05D001342 5.0e-06 56.2 97 36.1
Sed0024723 Sechium edule HOM05D001521 ORTHO05D001342 5.0e-06 56.2 97 34.0
CANSAT54G0874 Cannabis sativa HOM05D001521 ORTHO05D001342 6.5e-06 55.8 160 31.9
Hma1.2p1_0189F.1_g082933 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 6.5e-06 55.8 104 33.7
PSO135G0667 Papaver somniferum HOM05D001521 ORTHO05D001342 6.5e-06 55.8 98 34.7
Sed0026868 Sechium edule HOM05D001521 ORTHO05D001342 6.5e-06 55.8 163 30.1


User provided reference genes

Program Settings