Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0054300 Rhododendron simsii HOM05D008406 ORTHO05D010960 0.0e+00 1696.8 848 100.0
RhsimUnG0189300 Rhododendron simsii HOM05D008406 ORTHO05D010960 0.0e+00 1396.7 910 82.0
Rhsim01G0161400 Rhododendron simsii HOM05D008406 ORTHO05D010960 0.0e+00 1395.6 910 81.9
RhsimUnG0190700 Rhododendron simsii HOM05D008406 ORTHO05D010960 0.0e+00 1393.6 910 81.9
Rhsim13G0002100 Rhododendron simsii HOM05D008406 ORTHO05D010960 0.0e+00 1392.9 910 81.8
Rhsim11G0039100 Rhododendron simsii HOM05D008406 ORTHO05D010960 0.0e+00 1390.6 910 81.6
Rhsim09G0075400 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.7e-296 1021.1 755 75.2
Rhsim06G0114000 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.2e-272 943.3 691 72.2
Rhsim04G0192000 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.3e-269 933.3 727 69.9
RhsimUnG0165400 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.4e-260 903.3 756 65.9
Rhsim04G0140000 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.6e-259 899.8 708 69.4
Rhsim06G0074500 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.2e-222 777.3 439 88.8
Rhsim04G0129500 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.8e-205 719.2 879 50.9
Rhsim04G0229500 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.2e-197 693.3 714 56.6
Rhsim02G0192500 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.0e-186 656.4 509 68.2
Rhsim13G0128400 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.3e-181 641.0 558 63.1
Rhsim04G0047800 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.0e-173 612.5 756 49.9
Rhsim02G0063100 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.1e-167 592.8 725 50.8
Rhsim04G0042900 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.5e-150 536.6 489 62.2
RhsimUnG0083200 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.6e-147 526.6 704 47.7
Rhsim05G0097200 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.0e-145 520.8 643 50.9
Rhsim01G0093200 Rhododendron simsii HOM05D008406 ORTHO05D010960 7.6e-145 518.8 407 65.6
Rhsim07G0162000 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.1e-141 506.1 705 47.5
Rhsim03G0108900 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.8e-139 500.4 578 53.1
Rhsim07G0158000 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.3e-138 496.1 644 50.2
Rhsim11G0017200 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.6e-134 483.0 710 44.6
Rhsim02G0086800 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.1e-122 443.7 548 50.7
Rhsim03G0059200 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.6e-110 403.3 407 57.7
RhsimUnG0052400 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.5e-108 398.3 317 66.9
Rhsim01G0168800 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.7e-107 394.8 604 42.2
Rhsim12G0097900 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.3e-106 389.8 403 56.1
Rhsim06G0074600 Rhododendron simsii HOM05D008406 ORTHO05D339876 4.5e-105 386.7 222 92.8
Rhsim13G0128300 Rhododendron simsii HOM05D008406 ORTHO05D339808 7.0e-98 362.8 346 62.4
Rhsim04G0043000 Rhododendron simsii HOM05D008406 ORTHO05D339498 2.7e-89 334.3 416 50.5
RhsimUnG0052300 Rhododendron simsii HOM05D008406 ORTHO05D010960 9.1e-82 309.3 184 82.1
Rhsim06G0145900 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.8e-77 295.0 556 40.5
Rhsim10G0118900 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.6e-73 282.0 411 42.1
Rhsim03G0059300 Rhododendron simsii HOM05D008406 ORTHO05D339582 2.2e-67 261.5 328 51.2
Rhsim10G0097000 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.0e-64 250.4 301 49.2
Rhsim10G0121500 Rhododendron simsii HOM05D008406 ORTHO05D010960 2.3e-61 241.5 698 31.2
Rhsim05G0105000 Rhododendron simsii HOM05D008406 ORTHO05D010960 7.5e-60 236.5 304 48.7
Rhsim02G0192600 Rhododendron simsii HOM05D008406 ORTHO05D340329 2.8e-54 218.0 178 72.5
Rhsim02G0063000 Rhododendron simsii HOM05D008406 ORTHO05D339226 1.3e-40 172.6 103 81.6
Rhsim05G0118300 Rhododendron simsii HOM05D008406 ORTHO05D010960 4.6e-33 147.5 265 37.4
Rhsim01G0093300 Rhododendron simsii HOM05D010378 ORTHO05D011279 3.9e-32 144.4 252 43.7
Rhsim10G0077600 Rhododendron simsii HOM05D008406 ORTHO05D010960 3.3e-31 141.4 150 53.3
Rhsim12G0098000 Rhododendron simsii HOM05D008406 ORTHO05D338771 2.4e-21 108.6 113 55.8
Rhsim03G0109000 Rhododendron simsii HOM05D008406 ORTHO05D010960 5.3e-21 107.5 74 71.6
RhsimUnG0052500 Rhododendron simsii HOM05D008406 ORTHO05D339657 6.9e-21 107.1 108 56.5
Rhsim01G0120000 Rhododendron simsii HOM05D008406 ORTHO05D340286 8.4e-19 100.1 112 50.0
Rhsim10G0077700 Rhododendron simsii HOM05D008406 ORTHO05D010960 1.8e-16 92.4 116 45.7
Rhsim13G0131300 Rhododendron simsii HOM05D008406 ORTHO05D340136 3.3e-15 88.2 93 53.8
vmacro04996 Vaccinium macrocarpon HOM05D010755 ORTHO05D012899 8.2e-14 83.6 312 26.9
Rhsim05G0105100 Rhododendron simsii HOM05D008406 ORTHO05D338787 1.1e-13 83.2 85 55.3
Rhsim13G0131400 Rhododendron simsii HOM05D008406 ORTHO05D339820 1.8e-13 82.4 304 27.6
RhsimUnG0190600 Rhododendron simsii HOM05D000062 ORTHO05D000043 5.3e-13 80.9 154 40.3
Rhsim05G0118400 Rhododendron simsii HOM05D008406 ORTHO05D010960 8.4e-11 73.6 73 57.5
Rhsim13G0157900 Rhododendron simsii HOM05D008626 ORTHO05D005393 1.4e-10 72.8 315 30.2
Rhsim03G0041600 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.9e-10 72.4 288 30.9
Rhsim05G0184100 Rhododendron simsii HOM05D008626 ORTHO05D010919 2.5e-10 72.0 245 30.6
Rhsim03G0010200 Rhododendron simsii HOM05D008626 ORTHO05D010919 3.2e-10 71.6 331 29.3
Rhsim05G0109000 Rhododendron simsii HOM05D008626 ORTHO05D010919 3.2e-10 71.6 331 29.3
Rhsim05G0211400 Rhododendron simsii HOM05D008626 ORTHO05D010919 3.2e-10 71.6 331 29.3
Rhsim11G0150700 Rhododendron simsii HOM05D008626 ORTHO05D010919 3.2e-10 71.6 331 29.3
RhsimUnG0076200 Rhododendron simsii HOM05D008626 ORTHO05D010919 3.2e-10 71.6 331 29.3
Rhsim10G0201400 Rhododendron simsii HOM05D008626 ORTHO05D010919 4.2e-10 71.2 330 29.7
vmacro21218 Vaccinium macrocarpon HOM05D015585 ORTHO05D010960 5.5e-10 70.9 180 27.8
Rhsim05G0023800 Rhododendron simsii HOM05D008626 ORTHO05D010919 7.1e-10 70.5 325 29.2
Rhsim01G0087400 Rhododendron simsii HOM05D008626 ORTHO05D010919 3.5e-09 68.2 317 29.0
RhsimUnG0191600 Rhododendron simsii HOM05D008626 ORTHO05D010919 3.5e-09 68.2 118 39.0
Rhsim05G0209900 Rhododendron simsii HOM05D008626 ORTHO05D010919 4.6e-09 67.8 325 28.9
Rhsim11G0109400 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.8e-08 65.9 224 31.7
Rhsim02G0093100 Rhododendron simsii HOM05D008626 ORTHO05D010919 2.3e-08 65.5 225 30.7
Rhsim08G0102400 Rhododendron simsii HOM05D008626 ORTHO05D010919 2.3e-08 65.5 330 29.4
Rhsim12G0032000 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.5e-07 62.8 192 30.7
Rhsim08G0126400 Rhododendron simsii HOM05D008626 ORTHO05D010919 2.5e-07 62.0 160 31.2
RhsimUnG0034200 Rhododendron simsii HOM05D008626 ORTHO05D010919 3.3e-07 61.6 152 32.9
RhsimUnG0097400 Rhododendron simsii HOM05D008626 ORTHO05D010919 7.4e-07 60.5 268 28.7
Rhsim02G0015100 Rhododendron simsii HOM05D008626 ORTHO05D010919 9.7e-07 60.1 331 28.7
Rhsim08G0006800 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.3e-06 59.7 317 29.0
Rhsim10G0045900 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.3e-06 59.7 317 29.0
Rhsim13G0183200 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.3e-06 59.7 135 34.1
Rhsim01G0019100 Rhododendron simsii HOM05D008626 ORTHO05D010919 1.6e-06 59.3 321 28.3
Rhsim01G0111300 Rhododendron simsii HOM05D008626 ORTHO05D010919 2.2e-06 58.9 242 28.5
Rhsim05G0059700 Rhododendron simsii HOM05D008626 ORTHO05D010919 2.2e-06 58.9 100 36.0
Rhsim04G0054700 Rhododendron simsii HOM05D008626 ORTHO05D010919 4.8e-06 57.8 317 28.7
Rhsim03G0035300 Rhododendron simsii HOM05D008626 ORTHO05D010919 6.3e-06 57.4 174 30.5
CSS0001933 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 8.2e-06 57.0 182 25.3


User provided reference genes

Program Settings