Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0052900 Rhododendron simsii HOM05D007970 ORTHO05D009943 2.4e-92 342.0 161 100.0
vmacro17329 Vaccinium macrocarpon HOM05D007970 ORTHO05D009943 3.3e-41 172.2 108 75.9
Actinidia21480 Actinidia chinensis HOM05D007970 ORTHO05D009943 4.6e-35 151.8 134 57.5
Actinidia14361 Actinidia chinensis HOM05D007970 ORTHO05D009943 6.7e-34 147.9 113 61.9
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 1.1e-31 140.6 143 53.8
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 1.3e-26 123.6 149 50.3
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 5.1e-26 121.7 136 50.0
Rhsim11G0193700 Rhododendron simsii HOM05D007970 ORTHO05D009943 1.5e-25 120.2 96 61.5
PGSC0003DMG400018628 Solanum tuberosum HOM05D007970 ORTHO05D009943 2.0e-22 109.8 105 56.2
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 5.9e-22 108.2 111 52.3
Potri.004G178101 Populus trichocarpa HOM05D007970 ORTHO05D009943 8.5e-21 104.4 149 43.6
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 1.1e-20 104.0 94 53.2
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 2.5e-20 102.8 111 53.2
Solyc01g111820.2 Solanum lycopersicum HOM05D007970 ORTHO05D009943 3.2e-20 102.4 106 50.9
Nitab4.5_0013642g0020 Nicotiana tabacum HOM05D007970 ORTHO05D009943 4.2e-20 102.1 106 50.9
Oeu045100.1 Olea europaea HOM05D007970 ORTHO05D009943 7.2e-20 101.3 92 53.3
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 7.2e-20 101.3 132 43.2
Sopen01g053860 Solanum pennellii HOM05D007970 ORTHO05D009943 4.7e-19 98.6 106 50.0
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 1.4e-18 97.1 148 42.6
Cfa005290 Carpinus fangiana HOM05D007970 ORTHO05D009943 5.1e-18 95.1 132 42.4
Oeu028958.1 Olea europaea HOM05D007970 ORTHO05D009943 5.1e-18 95.1 101 47.5
FAN20G1196 Fragaria x ananassa HOM05D007970 ORTHO05D009943 6.7e-18 94.7 134 44.0
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 8.8e-18 94.4 143 42.7
Lj9P400T40 Lonicera japonica HOM05D007970 ORTHO05D009943 8.8e-18 94.4 134 46.3
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 1.1e-17 94.0 134 44.0
Peaxi162Scf00362g00411 Petunia axillaris HOM05D007970 ORTHO05D009943 1.1e-17 94.0 106 48.1
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 1.1e-17 94.0 94 51.1
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 1.5e-17 93.6 91 53.8
Duzib248G1052 Durio zibethinus HOM05D007970 ORTHO05D009943 1.5e-17 93.6 157 39.5
Lsat_1_v5_gn_4_72040 Lactuca sativa HOM05D007970 ORTHO05D009943 2.6e-17 92.8 83 56.6
Sabra04G0119900 Salix brachista HOM05D007970 ORTHO05D009943 2.6e-17 92.8 135 45.2
FvH4_2g15690 Fragaria vesca HOM05D007970 ORTHO05D009943 3.3e-17 92.4 134 43.3
MD10G1128300 Malus domestica HOM05D007970 ORTHO05D009943 3.3e-17 92.4 95 51.6
Haze_02097 Corylus avellana HOM05D007970 ORTHO05D009943 4.4e-17 92.0 134 41.8
FAN24G2575 Fragaria x ananassa HOM05D007970 ORTHO05D009943 4.4e-17 92.0 145 42.1
Manes.11G099100 Manihot esculenta HOM05D007970 ORTHO05D009943 2.8e-16 89.4 118 44.1
Actinidia20529 Actinidia chinensis HOM05D007970 ORTHO05D009943 6.3e-16 88.2 77 59.7
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 1.1e-15 87.4 106 47.2
RcHm_v2.0_Chr6g0278991 Rosa chinensis HOM05D007970 ORTHO05D009943 1.1e-15 87.4 135 42.2
Prupe.8G169400 Prunus persica HOM05D007970 ORTHO05D009943 1.8e-15 86.7 98 50.0
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 1.8e-15 86.7 127 44.9
SGA_v2.0_scaffold195G40813 Striga asiatica HOM05D007970 ORTHO05D009943 5.3e-15 85.1 77 57.1
SGA_v2.0_scaffold32G13308 Striga asiatica HOM05D007970 ORTHO05D009943 2.0e-14 83.2 83 53.0
QL11p052437 Quercus lobata HOM05D007970 ORTHO05D009943 3.4e-14 82.4 153 38.6
Peaxi162Scf00078g00137 Petunia axillaris HOM05D007970 ORTHO05D009943 4.5e-14 82.0 100 49.0
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 7.7e-14 81.3 106 40.6
Gohir.A03G206000 Gossypium hirsutum HOM05D007970 ORTHO05D009943 3.8e-13 79.0 175 32.6
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 3.8e-13 79.0 100 44.0
Gorai.005G255300 Gossypium raimondii HOM05D007970 ORTHO05D009943 8.5e-13 77.8 175 32.6
Migut.N01333 Erythranthe guttata HOM05D007970 ORTHO05D009943 1.1e-12 77.4 79 50.6
Gohir.D01G161700 Gossypium hirsutum HOM05D007970 ORTHO05D009943 1.1e-12 77.4 126 37.3
Gorai.002G200600 Gossypium raimondii HOM05D007970 ORTHO05D009943 1.1e-12 77.4 126 37.3
Cpa.g.sc20.116 Carica papaya HOM05D007970 ORTHO05D009943 1.4e-12 77.0 99 47.5
Nitab4.5_0000079g0240 Nicotiana tabacum HOM05D007970 ORTHO05D009943 1.4e-12 77.0 65 56.9
Manes.04G070700 Manihot esculenta HOM05D007970 ORTHO05D009943 1.9e-12 76.6 141 37.6
CiPaw.05G085600 Carya illinoinensis HOM05D007970 ORTHO05D009943 2.5e-12 76.3 102 46.1
Gohir.D02G227400 Gossypium hirsutum HOM05D007970 ORTHO05D009943 2.5e-12 76.3 175 32.0
Atru.chr5.3444 Acer truncatum HOM05D007970 ORTHO05D009943 7.2e-12 74.7 120 38.3
Migut.B00057 Erythranthe guttata HOM05D007970 ORTHO05D009943 7.2e-12 74.7 91 46.2
Gorai.012G156800 Gossypium raimondii HOM05D007970 ORTHO05D009943 1.2e-11 73.9 104 35.6
Gohir.A04G131900 Gossypium hirsutum HOM05D007970 ORTHO05D009943 4.7e-11 72.0 108 35.2
Gohir.D04G168500 Gossypium hirsutum HOM05D007970 ORTHO05D009943 6.1e-11 71.6 84 40.5
CANSAT25G3784 Cannabis sativa HOM05D007970 ORTHO05D009943 1.4e-10 70.5 141 37.6
Ciclev10030163m.g Citrus clementina HOM05D007970 ORTHO05D009943 3.0e-10 69.3 169 35.5
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 5.2e-10 68.6 105 41.9
DCAR_022819 Daucus carota HOM05D046813 ORTHO05D009943 2.6e-09 66.2 114 36.0
DCAR_022820 Daucus carota HOM05D046813 ORTHO05D009943 2.6e-09 66.2 114 36.0
SGA_v2.0_scaffold58G20343 Striga asiatica HOM05D007970 ORTHO05D009943 4.4e-09 65.5 90 42.2
ClCG02G012110 Citrullus lanatus HOM05D007970 ORTHO05D009943 1.3e-08 63.9 93 41.9
Peaxi162Scf00373g00094 Petunia axillaris HOM05D007970 ORTHO05D009943 1.3e-08 63.9 56 60.7
FAN05G2500 Fragaria x ananassa HOM05D006872 ORTHO05D006261 2.8e-08 62.8 121 33.9
Sc18g0006290 Simmondsia chinensis HOM05D007970 ORTHO05D009943 3.7e-08 62.4 91 40.7
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 6.3e-08 61.6 91 42.9
Aqoxy4G02683 Aquilegia oxysepala HOM05D006872 ORTHO05D006261 1.1e-07 60.8 116 33.6
MELO3C034691.2 Cucumis melo HOM05D007970 ORTHO05D009943 1.1e-07 60.8 93 44.1
FAN05G3358 Fragaria x ananassa HOM05D006872 ORTHO05D006261 1.1e-07 60.8 121 33.1
MD12G1037000 Malus domestica HOM05D006872 ORTHO05D006261 1.4e-07 60.5 135 32.6
Nitab4.5_0000020g0340 Nicotiana tabacum HOM05D006872 ORTHO05D006261 1.4e-07 60.5 80 38.8
Nn2g14262 Nelumbo nucifera HOM05D006872 ORTHO05D006261 3.1e-07 59.3 92 41.3
FvH4_6g19940 Fragaria vesca HOM05D006872 ORTHO05D006261 5.3e-07 58.5 99 34.3
FAN14G4576 Fragaria x ananassa HOM05D006872 ORTHO05D006261 5.3e-07 58.5 99 34.3
PGR004G0970 Punica granatum HOM05D006872 ORTHO05D006261 5.3e-07 58.5 121 34.7
BraA03t09629Z Brassica rapa HOM05D010494 ORTHO05D006261 1.2e-06 57.4 106 29.2
MD14G1036000 Malus domestica HOM05D006872 ORTHO05D006261 1.2e-06 57.4 99 35.4
BolC3t12855H Brassica oleracea HOM05D010494 ORTHO05D006261 1.6e-06 57.0 118 30.5
Glyma.03G200500 Glycine max HOM05D006872 ORTHO05D006261 1.6e-06 57.0 121 36.4
Actinidia07935 Actinidia chinensis HOM05D006872 ORTHO05D006261 2.0e-06 56.6 69 43.5
C03p03070 Brassica napus HOM05D010494 ORTHO05D006261 2.0e-06 56.6 118 30.5
Sed0000741 Sechium edule HOM05D006872 ORTHO05D006261 2.0e-06 56.6 112 33.9
ClCG10G018510 Citrullus lanatus HOM05D006872 ORTHO05D006261 2.6e-06 56.2 129 31.8
Nitab4.5_0011425g0030 Nicotiana tabacum HOM05D006872 ORTHO05D006261 2.6e-06 56.2 76 38.2
Solyc01g007770.2 Solanum lycopersicum HOM05D006872 ORTHO05D006261 2.6e-06 56.2 80 36.2
Sopen01g003310 Solanum pennellii HOM05D006872 ORTHO05D006261 2.6e-06 56.2 80 36.2
PGSC0003DMG400016417 Solanum tuberosum HOM05D006872 ORTHO05D006261 2.6e-06 56.2 80 36.2
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 2.6e-06 56.2 64 43.8
A03p02670 Brassica napus HOM05D010494 ORTHO05D006261 4.5e-06 55.5 106 29.2
CiPaw.13G131800 Carya illinoinensis HOM05D006872 ORTHO05D006261 4.5e-06 55.5 65 49.2
Nn1g08119 Nelumbo nucifera HOM05D006872 ORTHO05D006261 4.5e-06 55.5 80 40.0
Lsat_1_v5_gn_5_87380 Lactuca sativa HOM05D006872 ORTHO05D006261 5.9e-06 55.1 76 38.2
MELO3C009518.2 Cucumis melo HOM05D006872 ORTHO05D006261 7.7e-06 54.7 112 33.0


User provided reference genes

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