Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0037900 Rhododendron simsii HOM05D010576 ORTHO05D012109 4.8e-230 801.2 534 100.0
Rhsim05G0033800 Rhododendron simsii HOM05D000041 ORTHO05D012109 1.6e-76 291.2 168 84.5
Rhsim05G0038000 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.5e-53 214.9 175 66.9
Rhsim05G0025200 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.9e-53 214.5 188 63.8
Rhsim05G0033700 Rhododendron simsii HOM05D000041 ORTHO05D012109 5.3e-51 206.5 140 73.6
Rhsim05G0025500 Rhododendron simsii HOM05D010576 ORTHO05D012109 6.0e-39 166.4 158 59.5
Rhsim01G0095700 Rhododendron simsii HOM05D010576 ORTHO05D012109 2.5e-37 161.0 142 60.6
Rhsim05G0025100 Rhododendron simsii HOM05D010576 ORTHO05D012109 4.8e-28 130.2 150 52.0
Rhsim05G0037000 Rhododendron simsii HOM05D010576 ORTHO05D012109 6.9e-27 126.3 196 42.9
Rhsim05G0025000 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.6e-20 105.1 178 40.4
Rhsim05G0037300 Rhododendron simsii HOM05D000234 ORTHO05D012109 2.4e-19 101.3 178 39.9
Rhsim05G0034400 Rhododendron simsii HOM05D000577 ORTHO05D012109 5.3e-19 100.1 228 37.3
Rhsim05G0033900 Rhododendron simsii HOM05D000577 ORTHO05D001093 5.9e-18 96.7 189 36.0
Rhsim05G0036600 Rhododendron simsii HOM05D010576 ORTHO05D012109 2.9e-17 94.4 120 46.7
Rhsim05G0024700 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.1e-16 92.4 117 47.9
Rhsim05G0025600 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.1e-16 92.4 117 47.9
vmacro10804 Vaccinium macrocarpon HOM05D000126 ORTHO05D022121 2.1e-15 88.2 325 28.0
Rhsim05G0077100 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.7e-12 78.6 117 41.9
Rhsim05G0035800 Rhododendron simsii HOM05D010576 ORTHO05D012109 2.2e-12 78.2 223 33.6
vmacro17215 Vaccinium macrocarpon HOM05D000126 ORTHO05D022121 3.7e-12 77.4 291 28.9
RhsimUnG0076800 Rhododendron simsii HOM05D010576 ORTHO05D012109 2.4e-11 74.7 156 39.1
Rhsim05G0037400 Rhododendron simsii HOM05D010576 ORTHO05D012109 3.1e-11 74.3 99 43.4
Rhsim05G0037800 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.2e-10 72.4 165 35.2
Rhsim05G0077200 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.5e-10 72.0 104 44.2
Gorai.007G351100 Gossypium raimondii HOM05D004369 ORTHO05D004907 5.0e-09 67.0 103 43.7
Rhsim05G0037200 Rhododendron simsii HOM05D009466 ORTHO05D338397 6.5e-09 66.6 134 37.3
Gohir.D11G320900 Gossypium hirsutum HOM05D004369 ORTHO05D004907 8.5e-09 66.2 103 43.7
Gohir.A11G305500 Gossypium hirsutum HOM05D004369 ORTHO05D004907 1.1e-08 65.9 103 45.6
RhsimUnG0020900 Rhododendron simsii HOM05D004369 ORTHO05D004907 1.1e-08 65.9 133 37.6
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.2e-08 64.3 127 37.8
Dinv06038 Davidia involucrata HOM05D004369 ORTHO05D004907 4.2e-08 63.9 138 37.0
CSS0041918 Camellia sinensis var. sinensis HOM05D004369 ORTHO05D004907 2.7e-07 61.2 121 38.8
Actinidia37863 Actinidia chinensis HOM05D004369 ORTHO05D004907 6.1e-07 60.1 124 41.1
Manes.08G065900 Manihot esculenta HOM05D004369 ORTHO05D004907 1.0e-06 59.3 148 37.2
Cfa019946 Carpinus fangiana HOM05D004369 ORTHO05D004907 1.8e-06 58.5 134 34.3
Dinv26453 Davidia involucrata HOM05D000455 ORTHO05D000434 1.8e-06 58.5 160 31.2
TAR623G1559 Trochodendron aralioides HOM05D004369 ORTHO05D004907 3.0e-06 57.8 131 33.6
Haze_20292 Corylus avellana HOM05D004369 ORTHO05D004907 5.1e-06 57.0 134 33.6


User provided reference genes

Program Settings