Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0036000 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.3e-75 285.4 138 100.0
Rhsim05G0025800 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.4e-59 233.0 137 86.9
Rhsim05G0025300 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.5e-58 229.6 133 88.0
Rhsim05G0034100 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.0e-51 205.3 126 83.3
vmacro14065 Vaccinium macrocarpon HOM05D009466 ORTHO05D008136 1.4e-27 126.7 115 53.9
Rhsim07G0114900 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.5e-26 120.9 114 54.4
Rhsim07G0111000 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.8e-24 116.3 114 51.8
Rhsim07G0112300 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.1e-24 115.2 114 51.8
Rhsim07G0113000 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.1e-24 115.2 114 51.8
Rhsim07G0114400 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.0e-22 110.5 118 50.0
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 1.7e-22 109.8 118 48.3
Rhsim07G0114200 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.9e-22 109.0 118 50.0
Rhsim07G0113100 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.9e-22 108.6 138 43.5
Rhsim07G0113500 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.0e-22 108.2 118 48.3
Rhsim07G0114500 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.0e-22 108.2 103 52.4
Rhsim07G0112900 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.1e-21 107.1 114 50.0
Rhsim07G0114600 Rhododendron simsii HOM05D009466 ORTHO05D010516 2.5e-21 105.9 115 44.3
Rhsim01G0128400 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.6e-21 104.8 118 46.6
Rhsim07G0114100 Rhododendron simsii HOM05D009466 ORTHO05D008136 9.5e-21 104.0 112 49.1
Rhsim07G0112600 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.7e-20 101.7 113 46.0
Rhsim07G0112200 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.5e-15 85.5 79 57.0
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 7.3e-13 77.8 126 37.3
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.6e-12 76.6 120 39.2
Rhsim07G0114700 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.8e-12 75.9 80 50.0
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.6e-12 75.5 120 39.2
Rhsim07G0113400 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.2e-12 74.7 124 38.7
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.4e-11 73.6 123 35.8
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 4.0e-11 72.0 120 37.5
Sabra06G0022800 Salix brachista HOM05D008848 ORTHO05D008136 4.0e-11 72.0 116 38.8
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 5.2e-11 71.6 123 38.2
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 8.9e-11 70.9 138 33.3
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 9.8e-10 67.4 113 38.9
Potri.006G034450 Populus trichocarpa HOM05D008848 ORTHO05D008136 1.3e-09 67.0 116 36.2
Rhsim07G0113900 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.7e-09 65.5 79 43.0
Rhsim07G0113800 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.9e-09 65.1 76 44.7
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 6.4e-09 64.7 120 34.2
Dinv21660 Davidia involucrata HOM05D008848 ORTHO05D008136 7.1e-08 61.2 109 37.6
Potri.006G034375 Populus trichocarpa HOM05D009287 ORTHO05D008136 7.1e-08 61.2 125 32.8
Rhsim03G0062000 Rhododendron simsii HOM05D009287 ORTHO05D008136 7.1e-08 61.2 132 31.1
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 1.2e-07 60.5 100 39.0
Rhsim07G0115000 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.2e-07 60.5 91 39.6
Nitab4.5_0001590g0010 Nicotiana tabacum HOM05D008848 ORTHO05D008136 2.1e-07 59.7 122 36.1
Rhsim03G0061900 Rhododendron simsii HOM05D009287 ORTHO05D008136 3.5e-07 58.9 104 36.5
Nitab4.5_0001381g0030 Nicotiana tabacum HOM05D008848 ORTHO05D008136 7.8e-07 57.8 107 36.4
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 1.3e-06 57.0 98 35.7
Peaxi162Scf00155g00133 Petunia axillaris HOM05D008848 ORTHO05D008136 1.7e-06 56.6 122 35.2
Psat1g148400 Pisum sativum HOM05D008683 ORTHO05D010884 2.3e-06 56.2 110 31.8
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 3.0e-06 55.8 106 33.0
Solyc08g078360.1 Solanum lycopersicum HOM05D008848 ORTHO05D008136 3.0e-06 55.8 116 33.6
Actinidia14403 Actinidia chinensis HOM05D009466 ORTHO05D008136 6.6e-06 54.7 123 33.3


User provided reference genes

Program Settings