Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 1.1e-119 433.3 217 100.0
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 6.3e-104 380.9 217 88.0
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 1.2e-99 366.7 209 89.0
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 3.0e-98 362.1 217 83.4
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 8.8e-98 360.5 215 83.7
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 6.3e-96 354.4 215 82.3
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.8e-95 352.8 215 81.9
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 5.4e-95 351.3 215 81.4
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 7.0e-95 350.9 212 83.5
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 9.2e-95 350.5 217 80.2
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 1.6e-94 349.7 216 81.5
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 2.3e-93 345.9 215 80.9
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 6.6e-93 344.4 206 82.5
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 1.9e-92 342.8 217 79.7
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 7.3e-92 340.9 217 79.7
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 7.3e-92 340.9 211 81.5
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 9.5e-92 340.5 215 79.1
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 1.6e-91 339.7 203 84.7
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 8.0e-91 337.4 203 82.3
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.0e-90 337.0 203 84.2
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 5.2e-90 334.7 209 80.9
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 6.8e-90 334.3 209 80.9
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 6.8e-90 334.3 209 80.9
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 8.9e-90 334.0 218 78.4
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 1.5e-89 333.2 209 80.4
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 2.0e-89 332.8 201 83.1
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 2.6e-89 332.4 203 82.8
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 3.4e-89 332.0 198 82.3
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 5.7e-89 331.3 209 78.9
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 7.5e-89 330.9 200 83.5
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 9.8e-89 330.5 218 77.5
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 9.8e-89 330.5 203 82.8
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 1.3e-88 330.1 198 84.3
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 1.7e-88 329.7 217 78.8
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 1.7e-88 329.7 217 78.8
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 2.9e-88 328.9 201 81.1
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 3.7e-88 328.6 215 78.6
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 3.7e-88 328.6 215 78.6
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 8.3e-88 327.4 201 81.1
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 2.4e-87 325.9 200 81.0
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 5.4e-87 324.7 209 78.9
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 5.4e-87 324.7 209 79.9
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 1.2e-86 323.6 200 81.5
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.6e-86 323.2 201 80.1
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.0e-86 322.8 202 79.7
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 3.5e-86 322.0 201 81.1
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 5.9e-86 321.2 237 72.2
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 5.9e-86 321.2 237 72.2
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 5.9e-86 321.2 205 78.5
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 5.9e-86 321.2 209 76.6
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 7.8e-86 320.9 198 80.3
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 7.8e-86 320.9 201 80.6
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 1.0e-85 320.5 201 78.6
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 1.3e-85 320.1 209 76.6
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 1.3e-85 320.1 209 75.6
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 1.7e-85 319.7 200 81.0
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 3.9e-85 318.5 203 77.8
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 5.0e-85 318.2 202 79.2
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 5.0e-85 318.2 209 76.1
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 5.0e-85 318.2 215 76.3
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 5.0e-85 318.2 215 74.4
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 5.0e-85 318.2 215 74.4
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 1.1e-84 317.0 205 78.0
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 2.5e-84 315.8 205 77.6
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 4.3e-84 315.1 197 79.2
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 4.3e-84 315.1 217 73.3
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 2.1e-83 312.8 199 78.9
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 2.1e-83 312.8 199 78.9
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 2.1e-83 312.8 199 78.9
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 2.1e-83 312.8 213 77.0
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 3.6e-83 312.0 199 78.4
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 3.6e-83 312.0 229 72.1
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 6.2e-83 311.2 199 77.4
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 8.0e-83 310.8 215 75.3
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 1.0e-82 310.5 199 77.4
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 1.4e-82 310.1 199 77.9
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 1.8e-82 309.7 199 75.9
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 2.3e-82 309.3 199 77.4
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 5.2e-82 308.1 199 76.9
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 6.8e-82 307.8 199 76.9
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 5.8e-81 304.7 188 81.4
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 6.4e-80 301.2 197 77.2
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 6.4e-80 301.2 230 69.6
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 1.1e-79 300.4 187 82.4
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 1.4e-79 300.1 197 76.6
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 4.1e-79 298.5 225 69.8
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 9.2e-79 297.4 197 75.1
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 2.5e-76 289.3 201 76.1
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 3.3e-76 288.9 209 73.2
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 1.1e-68 263.8 187 73.8
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 2.8e-67 259.2 197 65.5
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 4.7e-67 258.5 221 65.2
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 3.1e-66 255.8 197 65.0
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.2e-65 253.8 201 68.7
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 2.6e-65 252.7 204 64.2
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 5.8e-65 251.5 160 81.2
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 7.6e-65 251.1 193 71.0
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 3.8e-64 248.8 197 64.5
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 6.4e-64 248.1 163 79.1
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 1.4e-63 246.9 197 64.0
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 9.6e-60 234.2 146 80.1
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 6.2e-59 231.5 163 74.2
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 2.6e-57 226.1 144 83.3
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 1.1e-52 210.7 122 87.7
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 2.8e-51 206.1 188 62.8
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.8e-50 203.4 122 87.7
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 8.4e-48 194.5 120 85.0
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 1.0e-45 187.6 143 69.2
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.1e-39 167.5 98 82.7
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 2.4e-39 166.4 108 81.5
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 1.6e-30 137.1 124 62.1
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 3.5e-30 136.0 92 69.6
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 8.7e-29 131.3 100 68.0
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 8.2e-27 124.8 101 69.3
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 1.4e-26 124.0 101 68.3
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 5.3e-26 122.1 202 36.1
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 1.0e-24 117.9 189 38.1
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 1.7e-24 117.1 191 38.7
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 1.0e-21 107.8 111 56.8
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.3e-21 107.5 59 76.3
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 9.1e-18 94.7 75 70.7
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 2.6e-17 93.2 78 51.3
Hma1.2p1_0663F.1_g198600 Hydrangea macrophylla HOM05D006447 ORTHO05D007938 2.1e-06 57.0 53 62.3


User provided reference genes

Program Settings