Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0025800 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.1e-76 287.3 140 100.0
Rhsim05G0025300 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.6e-68 261.5 140 92.9
Rhsim05G0034100 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.0e-62 241.1 129 92.2
Rhsim05G0036000 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.4e-59 233.0 137 86.9
vmacro14065 Vaccinium macrocarpon HOM05D009466 ORTHO05D008136 1.5e-29 133.3 115 54.8
Rhsim07G0114900 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.6e-29 131.3 114 56.1
Rhsim07G0112300 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.8e-28 128.3 114 54.4
Rhsim07G0113000 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.8e-28 128.3 114 54.4
Rhsim07G0111000 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.5e-26 123.2 114 53.5
Rhsim07G0114600 Rhododendron simsii HOM05D009466 ORTHO05D010516 2.0e-26 122.9 115 48.7
Rhsim07G0114500 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.6e-26 122.5 103 56.3
Rhsim07G0113100 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.6e-26 120.9 121 48.8
Rhsim07G0114400 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.7e-25 119.8 118 52.5
Rhsim07G0112600 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.4e-24 116.7 135 45.2
Rhsim07G0112900 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.4e-24 116.7 114 52.6
Rhsim07G0113500 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.2e-24 115.5 118 50.8
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 9.3e-24 114.0 118 49.2
Rhsim07G0114200 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.6e-23 113.2 118 50.8
Rhsim01G0128400 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.0e-23 111.3 118 48.3
Rhsim07G0114100 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.1e-22 108.2 118 48.3
Rhsim07G0112200 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.2e-17 92.8 79 59.5
Rhsim07G0114700 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.6e-15 85.1 80 53.8
Rhsim07G0113400 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.3e-14 83.6 85 51.8
Sabra06G0022800 Salix brachista HOM05D008848 ORTHO05D008136 3.0e-14 82.4 116 41.4
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 8.7e-14 80.9 125 36.8
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 5.7e-13 78.2 125 38.4
Potri.006G034450 Populus trichocarpa HOM05D008848 ORTHO05D008136 9.6e-13 77.4 116 38.8
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.6e-12 76.6 116 38.8
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.1e-12 76.3 116 38.8
Potri.006G034375 Populus trichocarpa HOM05D009287 ORTHO05D008136 1.8e-11 73.2 125 35.2
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.8e-11 73.2 103 38.8
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.8e-11 73.2 112 38.4
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.1e-11 72.4 119 37.0
Rhsim07G0113900 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.1e-11 72.0 79 45.6
Rhsim03G0062000 Rhododendron simsii HOM05D009287 ORTHO05D008136 6.9e-11 71.2 122 34.4
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 9.0e-11 70.9 102 40.2
Rhsim07G0115000 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.5e-10 70.1 87 44.8
Nitab4.5_0001590g0010 Nicotiana tabacum HOM05D008848 ORTHO05D008136 3.4e-10 68.9 107 41.1
Nitab4.5_0001381g0030 Nicotiana tabacum HOM05D008848 ORTHO05D008136 4.5e-10 68.6 107 39.3
Rhsim07G0113800 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.6e-10 67.8 76 46.1
Rhsim03G0061900 Rhododendron simsii HOM05D009287 ORTHO05D008136 1.3e-09 67.0 122 36.1
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 5.0e-09 65.1 116 33.6
Peaxi162Scf00155g00133 Petunia axillaris HOM05D008848 ORTHO05D008136 8.5e-09 64.3 112 37.5
Solyc08g078360.1 Solanum lycopersicum HOM05D008848 ORTHO05D008136 1.4e-08 63.5 107 36.4
Psat1g148400 Pisum sativum HOM05D008683 ORTHO05D010884 2.5e-08 62.8 110 33.6
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 2.5e-08 62.8 106 34.9
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 3.2e-08 62.4 102 35.3
Dinv21660 Davidia involucrata HOM05D008848 ORTHO05D008136 5.5e-08 61.6 109 38.5
Potri.016G032783 Populus trichocarpa HOM05D008848 ORTHO05D008136 5.5e-08 61.6 108 34.3
Actinidia14403 Actinidia chinensis HOM05D009466 ORTHO05D008136 7.2e-08 61.2 119 35.3
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 1.6e-07 60.1 116 37.9
TPR.G18169 Trifolium pratense HOM05D008683 ORTHO05D010884 4.6e-07 58.5 101 33.7
Hma1.2p1_0316F.1_g122780 Hydrangea macrophylla HOM05D010926 ORTHO05D008136 3.0e-06 55.8 57 43.9
PGSC0003DMG400033155 Solanum tuberosum HOM05D008848 ORTHO05D008136 3.0e-06 55.8 96 38.5


User provided reference genes

Program Settings