Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0025100 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.0e-159 567.0 271 100.0
Rhsim05G0033700 Rhododendron simsii HOM05D000041 ORTHO05D012109 1.3e-37 161.4 140 60.7
Rhsim05G0025200 Rhododendron simsii HOM05D010576 ORTHO05D012109 2.0e-30 137.5 155 51.6
Rhsim05G0033800 Rhododendron simsii HOM05D000041 ORTHO05D012109 3.4e-30 136.7 144 52.8
Rhsim05G0038000 Rhododendron simsii HOM05D010576 ORTHO05D012109 2.9e-29 133.7 148 52.7
Rhsim05G0037900 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.1e-28 131.7 150 52.0
Rhsim01G0095700 Rhododendron simsii HOM05D010576 ORTHO05D012109 5.8e-22 109.4 145 45.5
Rhsim05G0025500 Rhododendron simsii HOM05D010576 ORTHO05D012109 3.5e-19 100.1 142 45.8
Rhsim05G0037300 Rhododendron simsii HOM05D000234 ORTHO05D012109 5.3e-15 86.3 180 35.0
Rhsim05G0025000 Rhododendron simsii HOM05D010576 ORTHO05D012109 2.0e-14 84.3 180 34.4
Rhsim05G0024700 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.1e-12 78.6 77 55.8
Rhsim05G0025600 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.1e-12 78.6 77 55.8
Rhsim05G0034400 Rhododendron simsii HOM05D000577 ORTHO05D012109 1.4e-12 78.2 77 53.2
Rhsim05G0033900 Rhododendron simsii HOM05D000577 ORTHO05D001093 4.2e-12 76.6 156 35.3
RhsimUnG0076800 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.3e-10 71.6 72 54.2
vmacro17215 Vaccinium macrocarpon HOM05D000126 ORTHO05D022121 1.7e-10 71.2 131 38.2
Rhsim05G0037000 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.5e-09 68.2 167 34.1
Rhsim05G0036500 Rhododendron simsii HOM05D005345 ORTHO05D004682 3.6e-08 63.5 29 82.8
Rhsim05G0077100 Rhododendron simsii HOM05D010576 ORTHO05D012109 4.8e-08 63.2 75 46.7
Rhsim05G0035800 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.8e-07 61.2 158 31.6
Rhsim05G0036600 Rhododendron simsii HOM05D010576 ORTHO05D012109 3.1e-07 60.5 78 46.2
TWI53G1830 Tripterygium wilfordii HOM05D005345 ORTHO05D004682 4.0e-07 60.1 34 70.6
vmacro10804 Vaccinium macrocarpon HOM05D000126 ORTHO05D022121 4.0e-07 60.1 157 31.8
Dinv34499 Davidia involucrata HOM05D005345 ORTHO05D004682 9.0e-07 58.9 58 46.6
QL08p065100 Quercus lobata HOM05D005345 ORTHO05D004682 2.0e-06 57.8 29 72.4
CiPaw.01G307600 Carya illinoinensis HOM05D005345 ORTHO05D004682 2.6e-06 57.4 34 64.7
Ciclev10030619m.g Citrus clementina HOM05D005345 ORTHO05D004682 2.6e-06 57.4 48 54.2
Lsat_1_v5_gn_2_126680 Lactuca sativa HOM05D005345 ORTHO05D004682 2.6e-06 57.4 57 45.6
DCAR_020155 Daucus carota HOM05D005345 ORTHO05D004682 3.4e-06 57.0 53 47.2
Rhsim09G0186300 Rhododendron simsii HOM05D005345 ORTHO05D004682 3.4e-06 57.0 59 40.7
Thecc.01G346100 Theobroma cacao HOM05D002045 ORTHO05D002014 4.5e-06 56.6 73 38.4
vmacro09953 Vaccinium macrocarpon HOM05D005345 ORTHO05D004682 4.5e-06 56.6 29 69.0
CAN.G1229.5 Capsicum annuum HOM05D005345 ORTHO05D004682 5.8e-06 56.2 29 72.4
Dinv26453 Davidia involucrata HOM05D000455 ORTHO05D000434 5.8e-06 56.2 172 26.7
Sopen03g025560 Solanum pennellii HOM05D005345 ORTHO05D004682 5.8e-06 56.2 29 72.4
PGSC0003DMG400022956 Solanum tuberosum HOM05D005345 ORTHO05D004682 5.8e-06 56.2 29 72.4
Atru.chr12.192 Acer truncatum HOM05D005345 ORTHO05D004682 7.6e-06 55.8 27 77.8
Eucgr.J00102 Eucalyptus grandis HOM05D005345 ORTHO05D004682 7.6e-06 55.8 29 69.0
Peaxi162Scf00073g00227 Petunia axillaris HOM05D005345 ORTHO05D004682 7.6e-06 55.8 29 69.0
TAR636G2104 Trochodendron aralioides HOM05D005345 ORTHO05D004682 7.6e-06 55.8 43 53.5
Nitab4.5_0005979g0010 Nicotiana tabacum HOM05D005345 ORTHO05D004682 9.9e-06 55.5 29 69.0


User provided reference genes

Program Settings