Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.3e-114 416.4 208 100.0
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 9.2e-36 154.5 187 54.0
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 6.0e-27 125.2 199 46.7
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 4.3e-25 119.0 193 45.6
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 7.6e-22 108.2 182 40.1
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 9.9e-22 107.8 202 42.1
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.7e-21 107.1 186 38.7
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 1.7e-21 107.1 194 40.2
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.9e-21 106.3 186 39.2
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 3.8e-21 105.9 206 38.3
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 3.8e-21 105.9 206 38.3
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 3.8e-21 105.9 182 39.6
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 4.9e-21 105.5 188 38.8
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 4.9e-21 105.5 188 38.8
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 4.9e-21 105.5 184 41.8
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 6.4e-21 105.1 185 38.9
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 1.1e-20 104.4 184 39.7
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 1.4e-20 104.0 188 38.8
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 1.4e-20 104.0 188 38.8
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.4e-20 103.2 177 39.5
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 2.4e-20 103.2 167 40.1
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 2.4e-20 103.2 185 41.6
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.2e-20 102.8 189 38.1
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.2e-20 102.8 179 39.7
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 5.4e-20 102.1 170 38.8
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 7.1e-20 101.7 199 38.7
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 7.1e-20 101.7 177 40.1
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 9.3e-20 101.3 185 42.7
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 1.2e-19 100.9 187 40.1
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 1.6e-19 100.5 185 41.6
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.6e-19 100.5 174 40.2
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.1e-19 100.1 186 38.2
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.7e-19 99.8 186 38.2
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 4.6e-19 99.0 171 37.4
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 6.0e-19 98.6 174 41.4
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 7.8e-19 98.2 201 38.3
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 1.0e-18 97.8 185 36.2
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.0e-18 97.8 187 39.0
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.0e-18 97.8 186 38.7
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 1.3e-18 97.4 196 40.8
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 1.3e-18 97.4 181 39.2
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 2.3e-18 96.7 215 35.8
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 3.0e-18 96.3 188 36.2
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 5.1e-18 95.5 195 37.4
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 8.7e-18 94.7 189 38.6
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 8.7e-18 94.7 183 38.3
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 8.7e-18 94.7 194 38.7
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 8.7e-18 94.7 192 38.5
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 1.1e-17 94.4 182 35.2
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 1.1e-17 94.4 182 35.2
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 1.1e-17 94.4 207 35.3
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 1.5e-17 94.0 181 37.0
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 2.5e-17 93.2 188 35.6
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 2.5e-17 93.2 194 39.7
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 3.3e-17 92.8 182 35.2
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 3.3e-17 92.8 187 36.4
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 5.6e-17 92.0 188 37.8
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 7.3e-17 91.7 191 40.3
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 7.3e-17 91.7 194 37.6
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.3e-16 90.9 183 39.3
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 1.6e-16 90.5 179 36.9
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 1.6e-16 90.5 186 40.3
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 1.6e-16 90.5 180 36.7
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 1.6e-16 90.5 186 37.6
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 2.1e-16 90.1 185 37.3
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.1e-16 90.1 180 36.7
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.8e-16 89.7 176 35.2
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 3.6e-16 89.4 212 34.4
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 3.6e-16 89.4 178 36.5
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 8.1e-16 88.2 181 35.4
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 8.1e-16 88.2 173 34.7
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 1.1e-15 87.8 197 37.1
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 1.1e-15 87.8 202 37.6
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 1.4e-15 87.4 223 33.6
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 1.8e-15 87.0 174 38.5
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 2.4e-15 86.7 194 37.6
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 2.4e-15 86.7 194 37.6
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 3.1e-15 86.3 179 37.4
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 4.0e-15 85.9 192 34.9
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 4.0e-15 85.9 187 35.3
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 4.0e-15 85.9 178 38.2
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 9.0e-15 84.7 174 37.9
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 1.5e-14 84.0 176 35.2
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 1.5e-14 84.0 178 38.8
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 2.0e-14 83.6 188 39.4
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 2.0e-14 83.6 183 35.0
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 2.6e-14 83.2 192 35.9
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 3.4e-14 82.8 174 33.9
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 5.8e-14 82.0 188 36.7
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 2.2e-13 80.1 191 33.5
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 2.9e-13 79.7 80 51.2
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 3.8e-13 79.3 183 33.9
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 4.9e-13 79.0 195 35.4
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 4.9e-13 79.0 174 34.5
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 6.4e-13 78.6 180 35.6
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 1.1e-12 77.8 174 33.9
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 1.4e-12 77.4 216 32.4
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 1.9e-12 77.0 198 34.3
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.9e-12 77.0 185 34.1
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 2.4e-12 76.6 179 34.1
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 2.4e-12 76.6 179 35.2
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 3.2e-12 76.3 188 37.2
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 2.1e-11 73.6 173 34.1
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 3.5e-11 72.8 198 33.3
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 1.3e-10 70.9 178 32.6
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 5.1e-10 68.9 184 35.3
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 8.7e-10 68.2 185 35.1
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 8.7e-10 68.2 212 32.5
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 1.9e-09 67.0 185 31.9
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 2.5e-09 66.6 186 31.2
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 2.5e-09 66.6 172 30.2
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 7.4e-09 65.1 174 31.0
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 9.6e-09 64.7 187 33.2
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 1.3e-08 64.3 177 32.8
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 1.3e-08 64.3 175 30.9
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.3e-08 64.3 203 30.0
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 2.1e-08 63.5 189 33.9
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 3.1e-07 59.7 201 32.8
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 9.0e-07 58.2 191 34.6
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 9.0e-07 58.2 194 29.9


User provided reference genes

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