Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0245400 Rhododendron simsii HOM05D006364 ORTHO05D007968 6.1e-73 277.3 135 100.0
QL06p013601 Quercus lobata HOM05D006364 ORTHO05D007968 3.0e-35 152.1 134 61.2
Nn3g21850 Nelumbo nucifera HOM05D006364 ORTHO05D007968 6.6e-35 151.0 135 61.5
GSVIVG01017645001 Vitis vinifera HOM05D006364 ORTHO05D007968 6.6e-35 151.0 135 61.5
Actinidia02518 Actinidia chinensis HOM05D006364 ORTHO05D007968 1.1e-34 150.2 135 61.5
CAN.G175.13 Capsicum annuum HOM05D006364 ORTHO05D007968 1.9e-34 149.4 135 60.7
Dinv15615 Davidia involucrata HOM05D006364 ORTHO05D007968 1.9e-34 149.4 135 60.7
Rhsim02G0000900 Rhododendron simsii HOM05D006364 ORTHO05D007968 1.9e-34 149.4 135 60.7
Gohir.A02G086100 Gossypium hirsutum HOM05D006364 ORTHO05D007968 2.5e-34 149.1 135 60.7
Gohir.D02G062300 Gossypium hirsutum HOM05D006364 ORTHO05D007968 2.5e-34 149.1 135 60.7
Gorai.005G070100 Gossypium raimondii HOM05D006364 ORTHO05D007968 2.5e-34 149.1 135 60.7
Thecc.04G308800 Theobroma cacao HOM05D006364 ORTHO05D007968 2.5e-34 149.1 135 60.7
CAN.G689.14 Capsicum annuum HOM05D006364 ORTHO05D007968 3.3e-34 148.7 135 60.0
CSS0027206 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 4.3e-34 148.3 135 60.0
Duzib212G0576 Durio zibethinus HOM05D006364 ORTHO05D007968 4.3e-34 148.3 135 60.0
Hma1.2p1_0013F.1_g008050 Hydrangea macrophylla HOM05D006364 ORTHO05D007968 9.6e-34 147.1 135 60.0
Nitab4.5_0000152g0370 Nicotiana tabacum HOM05D006364 ORTHO05D007968 9.6e-34 147.1 135 59.3
Nitab4.5_0003130g0060 Nicotiana tabacum HOM05D006364 ORTHO05D007968 9.6e-34 147.1 135 59.3
THA.LOC104820323 Tarenaya hassleriana HOM05D006364 ORTHO05D007968 9.6e-34 147.1 135 59.3
Solyc04g071180.3 Solanum lycopersicum HOM05D006364 ORTHO05D007968 1.2e-33 146.7 135 59.3
Sopen04g027130 Solanum pennellii HOM05D006364 ORTHO05D007968 1.2e-33 146.7 135 59.3
Cpa.g.sc146.52 Carica papaya HOM05D006364 ORTHO05D007968 1.6e-33 146.4 135 59.3
Cc03_g00390 Coffea canephora HOM05D006364 ORTHO05D007968 1.6e-33 146.4 133 59.4
Haze_00814 Corylus avellana HOM05D006364 ORTHO05D007968 1.6e-33 146.4 135 60.7
RcHm_v2.0_Chr4g0426541 Rosa chinensis HOM05D006364 ORTHO05D007968 1.6e-33 146.4 133 60.2
Peaxi162Scf00126g01328 Petunia axillaris HOM05D006364 ORTHO05D007968 4.7e-33 144.8 135 58.5
EL10Ac1g00595 Beta vulgaris HOM05D006364 ORTHO05D007968 8.1e-33 144.1 133 57.9
CsaV3_3G015430 Cucumis sativus L. HOM05D006364 ORTHO05D007968 8.1e-33 144.1 135 57.8
Prupe.1G110000 Prunus persica HOM05D006364 ORTHO05D007968 8.1e-33 144.1 133 60.2
ClCG05G006780 Citrullus lanatus HOM05D006364 ORTHO05D007968 1.1e-32 143.7 161 54.7
COL.COLO4_34533 Corchorus olitorius HOM05D006364 ORTHO05D007968 1.4e-32 143.3 135 58.5
Sed0012877 Sechium edule HOM05D006364 ORTHO05D007968 1.4e-32 143.3 135 58.5
PGSC0003DMG400008613 Solanum tuberosum HOM05D006364 ORTHO05D007968 1.4e-32 143.3 135 58.5
Duzib151G1172 Durio zibethinus HOM05D006364 ORTHO05D007968 1.8e-32 142.9 130 59.2
MD16G1140400 Malus domestica HOM05D006364 ORTHO05D007968 1.8e-32 142.9 135 59.3
Actinidia31587 Actinidia chinensis HOM05D006364 ORTHO05D007968 2.4e-32 142.5 135 57.8
CSS0032087 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 3.1e-32 142.1 135 58.5
FvH4_4g21000 Fragaria vesca HOM05D006364 ORTHO05D007968 5.2e-32 141.4 132 59.1
FAN12G1354 Fragaria x ananassa HOM05D000037 ORTHO05D001684 5.2e-32 141.4 132 59.1
MELO3C006742.2 Cucumis melo HOM05D006364 ORTHO05D007968 6.9e-32 141.0 135 57.0
HPP92_017027 Vanilla planifolia HOM05D006364 ORTHO05D007968 8.9e-32 140.6 131 58.0
MSTRG.26303 Avicennia marina HOM05D006364 ORTHO05D007968 1.2e-31 140.2 134 56.0
CANSAT78G0762 Cannabis sativa HOM05D006364 ORTHO05D007968 1.2e-31 140.2 135 57.8
Glyma.15G136600 Glycine max HOM05D006364 ORTHO05D007968 1.2e-31 140.2 133 57.1
HanXRQChr09g0252081 Helianthus annuus HOM05D006364 ORTHO05D007968 1.2e-31 140.2 131 58.8
Medtr2g032700 Medicago truncatula HOM05D006364 ORTHO05D007968 1.2e-31 140.2 132 56.1
CDE11G0289 Ceratophyllum demersum HOM05D006364 ORTHO05D007968 2.6e-31 139.0 133 54.9
Eucgr.H04093 Eucalyptus grandis HOM05D006364 ORTHO05D007968 2.6e-31 139.0 135 56.3
ECA246G0645 Erigeron canadensis HOM05D006364 ORTHO05D007968 3.4e-31 138.7 131 58.8
Phvul.006G121400 Phaseolus vulgaris HOM05D006364 ORTHO05D007968 3.4e-31 138.7 132 56.8
TWI73G0896 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 3.4e-31 138.7 135 55.6
CiPaw.01G113600 Carya illinoinensis HOM05D006364 ORTHO05D007968 4.4e-31 138.3 133 57.1
arahy.Tifrunner.gnm1.ann1.28BCJ9 Arachis hypogaea HOM05D006364 ORTHO05D007968 5.8e-31 137.9 133 55.6
arahy.Tifrunner.gnm1.ann1.8W9CKH Arachis hypogaea HOM05D006364 ORTHO05D007968 5.8e-31 137.9 133 55.6
arahy.Tifrunner.gnm1.ann1.ZVI86Q Arachis hypogaea HOM05D006364 ORTHO05D007968 5.8e-31 137.9 133 55.6
Psat1g163400 Pisum sativum HOM05D006364 ORTHO05D007968 5.8e-31 137.9 133 55.6
Glyma.09G031500 Glycine max HOM05D006364 ORTHO05D007968 9.9e-31 137.1 135 55.6
Lj7E712T1 Lonicera japonica HOM05D006364 ORTHO05D007968 9.9e-31 137.1 78 83.3
Lalb_Chr18g0058441 Lupinus albus HOM05D006364 ORTHO05D007968 9.9e-31 137.1 132 56.8
TPR.G30811 Trifolium pratense HOM05D006364 ORTHO05D007968 9.9e-31 137.1 133 56.4
Potri.010G152100 Populus trichocarpa HOM05D006364 ORTHO05D007968 1.3e-30 136.7 135 55.6
Aa31LG8G4220 Aethionema arabicum HOM05D006364 ORTHO05D007968 2.9e-30 135.6 135 53.3
Migut.B01021 Erythranthe guttata HOM05D006364 ORTHO05D007968 4.9e-30 134.8 134 53.7
Migut.N00017 Erythranthe guttata HOM05D006364 ORTHO05D007968 4.9e-30 134.8 134 53.7
Hund19242 Selenicereus undatus HOM05D006364 ORTHO05D007968 4.9e-30 134.8 135 52.6
Lj6g0013185 Lotus japonicus HOM05D006364 ORTHO05D007968 6.4e-30 134.4 133 55.6
Sp3g15490 Schrenkiella parvula HOM05D006364 ORTHO05D007968 6.4e-30 134.4 135 54.1
AL3G30350 Arabidopsis lyrata HOM05D006364 ORTHO05D007968 1.9e-29 132.9 135 54.1
AT3G17300 Arabidopsis thaliana HOM05D006364 ORTHO05D007968 1.9e-29 132.9 135 54.1
Carub.0003s1701 Capsella rubella HOM05D006364 ORTHO05D007968 1.9e-29 132.9 135 54.1
PGR004G1259 Punica granatum HOM05D006364 ORTHO05D007968 1.9e-29 132.9 135 54.1
Zm00001eb028690 Zea mays HOM05D006364 ORTHO05D007968 1.9e-29 132.9 131 55.0
DCAR_026961 Daucus carota HOM05D006364 ORTHO05D007968 2.4e-29 132.5 133 53.4
Potri.008G100400 Populus trichocarpa HOM05D006364 ORTHO05D007968 3.2e-29 132.1 129 55.0
BcaB04g18937 Brassica carinata HOM05D006364 ORTHO05D007968 4.2e-29 131.7 135 53.3
BcaB04g20848 Brassica carinata HOM05D006364 ORTHO05D007968 4.2e-29 131.7 135 53.3
A03p40140 Brassica napus HOM05D006364 ORTHO05D007968 4.2e-29 131.7 135 53.3
BraA03t13164Z Brassica rapa HOM05D006364 ORTHO05D007968 4.2e-29 131.7 135 53.3
Thhalv10021841m.g Eutrema salsugineum HOM05D006364 ORTHO05D007968 4.2e-29 131.7 135 53.3
BcaC01g03770 Brassica carinata HOM05D006364 ORTHO05D007968 9.3e-29 130.6 135 52.6
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 9.3e-29 130.6 127 55.1
Zm00001eb418900 Zea mays HOM05D006364 ORTHO05D007968 9.3e-29 130.6 131 54.2
BcaC01g03776 Brassica carinata HOM05D006364 ORTHO05D007968 1.6e-28 129.8 135 52.6
C03p48710 Brassica napus HOM05D006364 ORTHO05D007968 1.6e-28 129.8 135 52.6
C03p48760 Brassica napus HOM05D006364 ORTHO05D007968 1.6e-28 129.8 135 52.6
BolC3t17152H Brassica oleracea HOM05D006364 ORTHO05D007968 1.6e-28 129.8 135 52.6
BcaC09g48691 Brassica carinata HOM05D006364 ORTHO05D007968 2.1e-28 129.4 135 52.6
C01p46890 Brassica napus HOM05D006364 ORTHO05D007968 2.1e-28 129.4 135 52.6
BolC1t04661H Brassica oleracea HOM05D006364 ORTHO05D007968 2.1e-28 129.4 135 52.6
Os12g0566100 Oryza sativa ssp. japonica HOM05D006364 ORTHO05D007968 2.1e-28 129.4 131 52.7
Aqoxy2G02602 Aquilegia oxysepala HOM05D006364 ORTHO05D007968 2.7e-28 129.0 135 54.1
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 2.7e-28 129.0 127 54.3
Lalb_Chr20g0120331 Lupinus albus HOM05D006364 ORTHO05D007968 3.5e-28 128.6 130 54.6
MBI18_g09661_MAGBIO Magnolia biondii HOM05D006364 ORTHO05D007968 4.6e-28 128.3 141 56.7
unitig_22.g5765 Utricularia gibba HOM05D006364 ORTHO05D007968 1.0e-27 127.1 135 51.9
CARHR092600 Cardamine hirsuta HOM05D006364 ORTHO05D007968 1.7e-27 126.3 132 53.0
A01p37010 Brassica napus HOM05D006364 ORTHO05D007968 6.6e-27 124.4 135 51.1
BraA01t03762Z Brassica rapa HOM05D006364 ORTHO05D007968 6.6e-27 124.4 135 51.1
TWI09G0430 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 1.5e-26 123.2 134 52.2
PSO210G6302 Papaver somniferum HOM05D006364 ORTHO05D007968 6.2e-25 117.9 135 49.6
PSO761G0417 Papaver somniferum HOM05D006364 ORTHO05D007968 6.2e-25 117.9 135 49.6
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 1.8e-24 116.3 133 52.6
SHI21779 Sapria himalayana HOM05D006364 ORTHO05D007968 1.8e-24 116.3 125 52.8
Manes.03G210000 Manihot esculenta HOM05D006364 ORTHO05D007968 5.8e-23 111.3 135 49.6
Zm00001eb224320 Zea mays HOM05D006364 ORTHO05D007968 9.9e-23 110.5 65 78.5
Zm00001eb137950 Zea mays HOM05D006364 ORTHO05D007968 1.3e-22 110.2 135 48.9
Sc07g0002970 Simmondsia chinensis HOM05D006364 ORTHO05D007968 2.4e-21 105.9 109 54.1
Lsat_1_v5_gn_6_117381 Lactuca sativa HOM05D006364 ORTHO05D007968 5.4e-21 104.8 143 44.1
Dinv29542 Davidia involucrata HOM05D006364 ORTHO05D007968 6.0e-20 101.3 109 52.3
SalBow4G1453 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.0e-19 100.5 134 44.0
Ah.05g176740 Amaranthus hybridus HOM05D006364 ORTHO05D007968 2.3e-19 99.4 109 51.4
Sed0013937 Sechium edule HOM05D006364 ORTHO05D007968 5.1e-19 98.2 109 51.4
EL10Ac3g06351 Beta vulgaris HOM05D006364 ORTHO05D007968 6.7e-19 97.8 101 51.5
SalBow6G4934 Salvia bowleyana HOM05D006364 ORTHO05D007968 3.3e-18 95.5 65 67.7
vmacro07987 Vaccinium macrocarpon HOM05D006364 ORTHO05D007968 1.3e-17 93.6 275 32.0
SGA_v2.0_scaffold449G51796 Striga asiatica HOM05D006364 ORTHO05D007968 2.0e-15 86.3 134 42.5
Pp3c26_11720 Physcomitrium patens HOM05D006364 ORTHO05D007968 4.9e-14 81.6 72 50.0
SMO196G0146 Selaginella moellendorffii HOM05D006364 ORTHO05D007968 8.4e-14 80.9 69 52.2
BraA01t03642Z Brassica rapa HOM05D006364 ORTHO05D007968 1.9e-13 79.7 72 58.3
Zm00001eb193610 Zea mays HOM05D006364 ORTHO05D007968 4.2e-13 78.6 103 43.7
A01p35610 Brassica napus HOM05D006364 ORTHO05D007968 2.7e-12 75.9 72 55.6
AagrBONN_evm.TU.Sc2ySwM_368.2196 Anthoceros agrestis HOM05D006364 ORTHO05D007968 4.6e-12 75.1 79 45.6
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 6.0e-12 74.7 132 38.6
MD13G1146500 Malus domestica HOM05D006364 ORTHO05D007968 1.3e-11 73.6 87 51.7
Ciclev10027020m.g Citrus clementina HOM05D006364 ORTHO05D007968 3.7e-09 65.5 146 37.7
SalBow3G2548 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.1e-08 63.9 62 48.4
Cfa015704 Carpinus fangiana HOM05D006364 ORTHO05D007968 5.3e-08 61.6 109 38.5
Cre14.g626250 Chlamydomonas reinhardtii HOM05D006364 ORTHO05D007968 5.3e-08 61.6 68 42.6
Actinidia07522 Actinidia chinensis HOM05D006364 ORTHO05D007968 1.0e-06 57.4 46 63.0
MCO05G593 Micromonas commoda HOM05D006364 ORTHO05D007968 3.8e-06 55.5 80 36.2


User provided reference genes

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